RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 GAGE2BQ13066 116 aa16.19■□□□□ 0.18
TRIM3-201ENST00000345851 GAGE2EQ4V326 116 aa16.19■□□□□ 0.18
TRIM3-201ENST00000345851 TIMD4Q96H15 378 aa16.19■□□□□ 0.18
TRIM3-201ENST00000345851 GAGE2DQ9UEU5 116 aa16.19■□□□□ 0.18
TRIM3-201ENST00000345851 TP53TG1Q9Y2A0 90 aa16.19■□□□□ 0.18
TRIM3-201ENST00000345851 TSHBP01222 138 aa16.19■□□□□ 0.18
TRIM3-201ENST00000345851 IGHV7-81A0A0B4J1V7 117 aa16.18■□□□□ 0.18
TRIM3-201ENST00000345851 RPL39P62891 51 aaKnown RBP16.18■□□□□ 0.18
TRIM3-201ENST00000345851 SNCGO76070 127 aa16.18■□□□□ 0.18
TRIM3-201ENST00000345851 DOPEY1Q5JWR5 2465 aa16.18■□□□□ 0.18
TRIM3-201ENST00000345851 LRRK2Q5S007 2527 aa16.17■□□□□ 0.18
TRIM3-201ENST00000345851 C9orf47Q6ZRZ4 202 aa16.17■□□□□ 0.18
TRIM3-201ENST00000345851 POLQO75417 2590 aa16.17■□□□□ 0.18
TRIM3-201ENST00000345851 C16orf92Q96LL3 132 aa16.17■□□□□ 0.18
TRIM3-201ENST00000345851 CCDC179H3BU77 68 aa16.16■□□□□ 0.18
TRIM3-201ENST00000345851 NTN5Q8WTR8 489 aaPredicted RBP16.16■□□□□ 0.18
TRIM3-201ENST00000345851 ZFP36P26651 326 aaKnown RBP16.16■□□□□ 0.18
TRIM3-201ENST00000345851 SLC25A29Q8N8R3 303 aa16.16■□□□□ 0.18
TRIM3-201ENST00000345851 A4D1N5 150 aa16.16■□□□□ 0.18
TRIM3-201ENST00000345851 NDUFV3P56181 108 aaKnown RBP16.16■□□□□ 0.18
TRIM3-201ENST00000345851 RHODO00212 210 aa16.15■□□□□ 0.18
TRIM3-201ENST00000345851 SRD5A1P18405 259 aa16.15■□□□□ 0.18
TRIM3-201ENST00000345851 CCDC140Q96MF4 163 aa16.14■□□□□ 0.17
TRIM3-201ENST00000345851 METTL26Q96S19 204 aa16.14■□□□□ 0.17
TRIM3-201ENST00000345851 BEX4Q9NWD9 120 aaPredicted RBP16.14■□□□□ 0.17
TRIM3-201ENST00000345851 ASIPP42127 132 aa16.13■□□□□ 0.17
TRIM3-201ENST00000345851 LY6G5BQ8NDX9 201 aa16.13■□□□□ 0.17
TRIM3-201ENST00000345851 C20orf173Q96LM9 149 aa16.13■□□□□ 0.17
TRIM3-201ENST00000345851 GNRH2O43555 120 aa16.13■□□□□ 0.17
TRIM3-201ENST00000345851 EIF4EBP3O60516 100 aaPredicted RBP16.13■□□□□ 0.17
TRIM3-201ENST00000345851 TTC32Q5I0X7 151 aa16.13■□□□□ 0.17
TRIM3-201ENST00000345851 IGHV3-64A0A075B6Q5 118 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 IGHV4-39P01824 125 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 ELANEP08246 267 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 PMVKQ15126 192 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 Q1RN00 199 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 C1orf122Q6ZSJ8 110 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 ZNRF2Q8NHG8 242 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 TRAV2A0A0B4J234 112 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 G3V318 75 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 VMO1Q7Z5L0 202 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 GPHB5Q86YW7 130 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 Q8N1Y9 231 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 ODF3BA8MYP8 253 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 BPESC1Q9GZL8 116 aa16.12■□□□□ 0.17
TRIM3-201ENST00000345851 MUC4Q99102 2169 aa16.11■□□□□ 0.17
TRIM3-201ENST00000345851 J3QQQ9 107 aa16.11■□□□□ 0.17
TRIM3-201ENST00000345851 LGALS3P17931 250 aaKnown RBP16.11■□□□□ 0.17
TRIM3-201ENST00000345851 GAGE12JA6NER3 117 aa16.11■□□□□ 0.17
TRIM3-201ENST00000345851 ATP6V0E1O15342 81 aa16.11■□□□□ 0.17
TRIM3-201ENST00000345851 GAGE7O76087 117 aa16.11■□□□□ 0.17
TRIM3-201ENST00000345851 GAGE12FP0CL80 117 aa16.11■□□□□ 0.17
TRIM3-201ENST00000345851 GAGE12GP0CL81 117 aa16.11■□□□□ 0.17
TRIM3-201ENST00000345851 GAGE12IP0CL82 117 aa16.11■□□□□ 0.17
TRIM3-201ENST00000345851 GAGE4Q13068 117 aa16.11■□□□□ 0.17
TRIM3-201ENST00000345851 TEX49A0A1B0GTD5 131 aa16.1■□□□□ 0.17
TRIM3-201ENST00000345851 IGIPA6NJ69 53 aa16.1■□□□□ 0.17
TRIM3-201ENST00000345851 IGHV3-33P01772 117 aa16.1■□□□□ 0.17
TRIM3-201ENST00000345851 ZFAND2AQ8N6M9 145 aa16.1■□□□□ 0.17
TRIM3-201ENST00000345851 RNASE4P34096 147 aaKnown RBP16.1■□□□□ 0.17
TRIM3-201ENST00000345851 PAPPA-AS1Q5QFB9 102 aa16.09■□□□□ 0.17
TRIM3-201ENST00000345851 CFAP161Q6P656 301 aa16.09■□□□□ 0.17
TRIM3-201ENST00000345851 SMIM20Q8N5G0 67 aa16.09■□□□□ 0.17
TRIM3-201ENST00000345851 Q8N6K4 173 aa16.09■□□□□ 0.17
TRIM3-201ENST00000345851 Q8N9W7 124 aa16.09■□□□□ 0.17
TRIM3-201ENST00000345851 AMELXQ99217 191 aa16.09■□□□□ 0.17
TRIM3-201ENST00000345851 JPT2Q9H910 190 aa16.09■□□□□ 0.17
TRIM3-201ENST00000345851 TRAV21A0A0B4J279 112 aa16.09■□□□□ 0.17
TRIM3-201ENST00000345851 CENPVL3A0A0U1RRI6 287 aa16.09■□□□□ 0.17
TRIM3-201ENST00000345851 IFITM1P13164 125 aa16.09■□□□□ 0.17
TRIM3-201ENST00000345851 FAM110DQ8TAY7 271 aaPredicted RBP16.09■□□□□ 0.17
TRIM3-201ENST00000345851 MRPL53Q96EL3 112 aaKnown RBP16.09■□□□□ 0.17
TRIM3-201ENST00000345851 BBC3Q96PG8 261 aaPredicted RBP16.09■□□□□ 0.17
TRIM3-201ENST00000345851 SHISA2Q6UWI4 295 aa16.08■□□□□ 0.16
TRIM3-201ENST00000345851 OPRPNQ99935 248 aaPredicted RBP16.08■□□□□ 0.16
TRIM3-201ENST00000345851 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRIM3-201ENST00000345851 IGKV3-7A0A075B6H7 116 aa16.07■□□□□ 0.16
TRIM3-201ENST00000345851 TRBV7-9A0A0J9YWB2 115 aa16.07■□□□□ 0.16
TRIM3-201ENST00000345851 F6UB75 175 aa16.07■□□□□ 0.16
TRIM3-201ENST00000345851 HERV-K104P63124 156 aa16.07■□□□□ 0.16
TRIM3-201ENST00000345851 ABCA2Q9BZC7 2435 aa16.07■□□□□ 0.16
TRIM3-201ENST00000345851 USP9YO00507 2555 aaPredicted RBP16.07■□□□□ 0.16
TRIM3-201ENST00000345851 MUSTN1Q8IVN3 82 aa16.06■□□□□ 0.16
TRIM3-201ENST00000345851 TMEM263Q8WUH6 116 aaKnown RBP16.06■□□□□ 0.16
TRIM3-201ENST00000345851 NRGNQ92686 78 aa16.06■□□□□ 0.16
TRIM3-201ENST00000345851 A0A087WWL8 130 aa16.06■□□□□ 0.16
TRIM3-201ENST00000345851 F5H697 171 aa16.06■□□□□ 0.16
TRIM3-201ENST00000345851 C15orf53Q8NAA6 179 aa16.06■□□□□ 0.16
TRIM3-201ENST00000345851 RNASE3P12724 160 aaKnown RBP16.05■□□□□ 0.16
TRIM3-201ENST00000345851 LINC01620Q4KN68 170 aa16.05■□□□□ 0.16
TRIM3-201ENST00000345851 FAM159AQ6UWV7 190 aa16.05■□□□□ 0.16
TRIM3-201ENST00000345851 IGHV1-69DA0A0B4J2H0 117 aa16.05■□□□□ 0.16
TRIM3-201ENST00000345851 OR10J6PQ8NGY7 276 aa16.05■□□□□ 0.16
TRIM3-201ENST00000345851 TRAV8-4A0A0B4J246 113 aa16.05■□□□□ 0.16
TRIM3-201ENST00000345851 ODF3Q96PU9 254 aa16.04■□□□□ 0.16
TRIM3-201ENST00000345851 ZNF256Q9Y2P7 627 aaPredicted RBP16.03■□□□□ 0.16
TRIM3-201ENST00000345851 CSPG4Q6UVK1 2322 aa16.03■□□□□ 0.16
TRIM3-201ENST00000345851 FBN2P35556 2912 aa16.03■□□□□ 0.16
TRIM3-201ENST00000345851 PPP1R17O96001 155 aa16.03■□□□□ 0.16
TRIM3-201ENST00000345851 RPL11P62913 178 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms