RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 DAND5Q8N907 189 aa13.49□□□□□ -0.25
SPAST-202ENST00000345662 U3KQE9 123 aa13.49□□□□□ -0.25
SPAST-202ENST00000345662 DYSFO75923 2080 aa13.49□□□□□ -0.25
SPAST-202ENST00000345662 NBL1P41271 181 aa13.49□□□□□ -0.25
SPAST-202ENST00000345662 NKAPP1Q8N9T2 125 aa13.49□□□□□ -0.25
SPAST-202ENST00000345662 PSMB8P28062 276 aa13.48□□□□□ -0.25
SPAST-202ENST00000345662 IGHG2P01859 326 aa13.48□□□□□ -0.25
SPAST-202ENST00000345662 PROP1O75360 226 aa13.47□□□□□ -0.25
SPAST-202ENST00000345662 CRYGBP07316 175 aa13.47□□□□□ -0.25
SPAST-202ENST00000345662 NDUFC2O95298 119 aa13.46□□□□□ -0.25
SPAST-202ENST00000345662 RNF114Q9Y508 228 aa13.46□□□□□ -0.25
SPAST-202ENST00000345662 TRAV4A0A0B4J268 109 aa13.46□□□□□ -0.25
SPAST-202ENST00000345662 CENPVL3A0A0U1RRI6 287 aa13.46□□□□□ -0.25
SPAST-202ENST00000345662 ELANEP08246 267 aa13.45□□□□□ -0.26
SPAST-202ENST00000345662 XCL1P47992 114 aa13.45□□□□□ -0.26
SPAST-202ENST00000345662 ZGRF1Q86YA3 2104 aa13.45□□□□□ -0.26
SPAST-202ENST00000345662 GNLYP22749 145 aa13.44□□□□□ -0.26
SPAST-202ENST00000345662 IGHV1-58A0A0C4DH39 117 aa13.44□□□□□ -0.26
SPAST-202ENST00000345662 F5H768 121 aa13.44□□□□□ -0.26
SPAST-202ENST00000345662 ANGP03950 147 aaKnown RBP13.44□□□□□ -0.26
SPAST-202ENST00000345662 DAD1P61803 113 aa13.44□□□□□ -0.26
SPAST-202ENST00000345662 C5orf38Q86SI9 138 aa13.44□□□□□ -0.26
SPAST-202ENST00000345662 JMJD7-PLA2G4BH0Y9G9 81 aa13.43□□□□□ -0.26
SPAST-202ENST00000345662 IGLV1-47P01700 117 aa13.43□□□□□ -0.26
SPAST-202ENST00000345662 hADV29S1A0JD25 119 aa13.43□□□□□ -0.26
SPAST-202ENST00000345662 IGLC6P0CF74 106 aa13.43□□□□□ -0.26
SPAST-202ENST00000345662 ZNF80P51504 273 aaPredicted RBP13.43□□□□□ -0.26
SPAST-202ENST00000345662 CLPSL2Q6UWE3 100 aa13.43□□□□□ -0.26
SPAST-202ENST00000345662 NCKAP5O14513 1909 aa13.42□□□□□ -0.26
SPAST-202ENST00000345662 IGKV2D-26A0A0A0MRZ7 120 aa13.42□□□□□ -0.26
SPAST-202ENST00000345662 IGHV3-30-3P0DP02 117 aa13.42□□□□□ -0.26
SPAST-202ENST00000345662 C2orf91Q6ZV80 131 aa13.42□□□□□ -0.26
SPAST-202ENST00000345662 VSIG2Q96IQ7 327 aa13.42□□□□□ -0.26
SPAST-202ENST00000345662 C20orf203Q8NBC4 194 aa13.42□□□□□ -0.26
SPAST-202ENST00000345662 OPRPNQ99935 248 aaPredicted RBP13.42□□□□□ -0.26
SPAST-202ENST00000345662 FREM1Q5H8C1 2179 aa13.42□□□□□ -0.26
SPAST-202ENST00000345662 LECT2O14960 151 aa13.42□□□□□ -0.26
SPAST-202ENST00000345662 TEX49A0A1B0GTD5 131 aa13.41□□□□□ -0.26
SPAST-202ENST00000345662 UQCRQO14949 82 aa13.41□□□□□ -0.26
SPAST-202ENST00000345662 EIF4EBP1Q13541 118 aaPredicted RBP13.41□□□□□ -0.26
SPAST-202ENST00000345662 COX7B2Q8TF08 81 aa13.41□□□□□ -0.26
SPAST-202ENST00000345662 NOP10Q9NPE3 64 aaKnown RBP13.41□□□□□ -0.26
SPAST-202ENST00000345662 TMEM61Q8N0U2 210 aa13.41□□□□□ -0.26
SPAST-202ENST00000345662 NACAE9PAV3 2078 aa13.41□□□□□ -0.26
SPAST-202ENST00000345662 Q8N9W7 124 aa13.4□□□□□ -0.26
SPAST-202ENST00000345662 RNF152Q8N8N0 203 aa13.4□□□□□ -0.26
SPAST-202ENST00000345662 MIAQ16674 131 aa13.4□□□□□ -0.26
SPAST-202ENST00000345662 NUP210Q8TEM1 1887 aaPredicted RBP13.4□□□□□ -0.26
SPAST-202ENST00000345662 AJUBAQ96IF1 538 aa13.4□□□□□ -0.26
SPAST-202ENST00000345662 DKK4Q9UBT3 224 aa13.39□□□□□ -0.27
SPAST-202ENST00000345662 DAZ2Q13117 558 aaKnown RBP13.39□□□□□ -0.27
SPAST-202ENST00000345662 DAZ4Q86SG3 579 aaKnown RBP13.39□□□□□ -0.27
SPAST-202ENST00000345662 NEXN-AS1Q8NBZ9 246 aa13.39□□□□□ -0.27
SPAST-202ENST00000345662 DAZ3Q9NR90 486 aaKnown RBP13.39□□□□□ -0.27
SPAST-202ENST00000345662 MAPKAPK5-AS1Q8N8E1 139 aa13.39□□□□□ -0.27
SPAST-202ENST00000345662 HIST2H2BCQ6DN03 193 aa13.39□□□□□ -0.27
SPAST-202ENST00000345662 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
SPAST-202ENST00000345662 ZNF106Q9H2Y7 1883 aaKnown RBP13.38□□□□□ -0.27
SPAST-202ENST00000345662 A0A096LPF7 62 aa13.38□□□□□ -0.27
SPAST-202ENST00000345662 A0A0J9YXY3 114 aa13.38□□□□□ -0.27
SPAST-202ENST00000345662 CGB3P0DN86 165 aa13.38□□□□□ -0.27
SPAST-202ENST00000345662 CGB7P0DN87 165 aa13.38□□□□□ -0.27
SPAST-202ENST00000345662 K7EQD1 137 aa13.37□□□□□ -0.27
SPAST-202ENST00000345662 WT1P19544 449 aaPredicted RBP13.37□□□□□ -0.27
SPAST-202ENST00000345662 FANCD2OSQ96PS1 177 aa13.37□□□□□ -0.27
SPAST-202ENST00000345662 NFE4Q86UQ8 179 aa13.36□□□□□ -0.27
SPAST-202ENST00000345662 U3KQK5 164 aa13.36□□□□□ -0.27
SPAST-202ENST00000345662 K7ENP7 123 aa13.36□□□□□ -0.27
SPAST-202ENST00000345662 MDFICQ9P1T7 246 aa13.36□□□□□ -0.27
SPAST-202ENST00000345662 RNF223E7ERA6 249 aa13.35□□□□□ -0.27
SPAST-202ENST00000345662 PRB1P04280 392 aa13.35□□□□□ -0.27
SPAST-202ENST00000345662 A0A0J9YY99 117 aa13.35□□□□□ -0.27
SPAST-202ENST00000345662 H3BQ85 93 aa13.35□□□□□ -0.27
SPAST-202ENST00000345662 IGFL2Q6UWQ7 119 aa13.35□□□□□ -0.27
SPAST-202ENST00000345662 LINC00574Q9H8X3 128 aa13.35□□□□□ -0.27
SPAST-202ENST00000345662 PSCAO43653 123 aa13.34□□□□□ -0.27
SPAST-202ENST00000345662 LINC00310P59036 64 aa13.34□□□□□ -0.27
SPAST-202ENST00000345662 COX7A2LO14548 114 aa13.34□□□□□ -0.27
SPAST-202ENST00000345662 FUSP35637 526 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPAST-202ENST00000345662 Q9HAA7 133 aa13.34□□□□□ -0.27
SPAST-202ENST00000345662 J3QLI3 93 aa13.34□□□□□ -0.27
SPAST-202ENST00000345662 MYCNOSP40205 109 aa13.33□□□□□ -0.27
SPAST-202ENST00000345662 DEFB1P60022 68 aa13.33□□□□□ -0.27
SPAST-202ENST00000345662 MSMPQ1L6U9 139 aa13.33□□□□□ -0.27
SPAST-202ENST00000345662 C14orf132Q9NPU4 83 aa13.33□□□□□ -0.27
SPAST-202ENST00000345662 DSCAML1Q8TD84 2053 aa13.33□□□□□ -0.28
SPAST-202ENST00000345662 MIR7-3HGQ8N6C7 128 aa13.33□□□□□ -0.28
SPAST-202ENST00000345662 TRBV7-3A0A075B6L6 115 aa13.33□□□□□ -0.28
SPAST-202ENST00000345662 C3orf22Q8N5N4 141 aa13.33□□□□□ -0.28
SPAST-202ENST00000345662 TNCP24821 2201 aa13.33□□□□□ -0.28
SPAST-202ENST00000345662 P0DMU3 169 aa13.33□□□□□ -0.28
SPAST-202ENST00000345662 FAM231AP0DMU4 169 aa13.33□□□□□ -0.28
SPAST-202ENST00000345662 FAM231CP0DMU5 169 aa13.33□□□□□ -0.28
SPAST-202ENST00000345662 C1orf229Q6ZS94 237 aaPredicted RBP13.32□□□□□ -0.28
SPAST-202ENST00000345662 C5orf56Q8N8D9 126 aa13.32□□□□□ -0.28
SPAST-202ENST00000345662 C5orf47Q569G3 176 aa13.32□□□□□ -0.28
SPAST-202ENST00000345662 Q8N976 141 aa13.32□□□□□ -0.28
SPAST-202ENST00000345662 MAPK1IP1LQ8NDC0 245 aa13.32□□□□□ -0.28
SPAST-202ENST00000345662 K7EMT4 169 aa13.32□□□□□ -0.28
SPAST-202ENST00000345662 TMEM256-PLSCR3K7ERE1 68 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms