RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 CRYGDP07320 174 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 EVI2AP22794 236 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 RPL35P42766 123 aaKnown RBP9.73□□□□□ -0.85
HMGN3-202ENST00000344726 RAB5CP51148 216 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 GAGE1Q13065 139 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 GAGE4Q13068 117 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 GAGE5Q13069 117 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 GAGE13Q4V321 117 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 SYT8Q8NBV8 401 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 ATP6V0E2Q8NHE4 81 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 SFRP2Q96HF1 295 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 MANBALQ9NQG1 85 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 MSRB1Q9NZV6 116 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 PHLDA3Q9Y5J5 127 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 A0A087WWL8 130 aa9.72□□□□□ -0.85
HMGN3-202ENST00000344726 K7EP13 123 aa9.72□□□□□ -0.85
HMGN3-202ENST00000344726 M0R381 172 aa9.72□□□□□ -0.85
HMGN3-202ENST00000344726 LINC01556Q5JQF7 62 aa9.72□□□□□ -0.85
HMGN3-202ENST00000344726 LELP1Q5T871 98 aa9.72□□□□□ -0.85
HMGN3-202ENST00000344726 FAM74A4Q5TZK3 123 aa9.72□□□□□ -0.85
HMGN3-202ENST00000344726 C11orf52Q96A22 123 aa9.72□□□□□ -0.85
HMGN3-202ENST00000344726 GTSF1LQ9H1H1 148 aa9.72□□□□□ -0.85
HMGN3-202ENST00000344726 hCG_2014768A0A024R1R8 64 aa9.71□□□□□ -0.86
HMGN3-202ENST00000344726 OR10J3Q5JRS4 329 aa9.71□□□□□ -0.86
HMGN3-202ENST00000344726 EIF5AL1Q6IS14 154 aaKnown RBP9.71□□□□□ -0.86
HMGN3-202ENST00000344726 PRR27Q6MZM9 219 aa9.71□□□□□ -0.86
HMGN3-202ENST00000344726 NFE4Q86UQ8 179 aa9.71□□□□□ -0.86
HMGN3-202ENST00000344726 SLC51BQ86UW2 128 aa9.71□□□□□ -0.86
HMGN3-202ENST00000344726 MAPKAPK5-AS1Q8N8E1 139 aa9.71□□□□□ -0.86
HMGN3-202ENST00000344726 FAT1Q14517 4588 aa9.7□□□□□ -0.86
HMGN3-202ENST00000344726 TRAV8-6A0A0B4J262 113 aa9.7□□□□□ -0.86
HMGN3-202ENST00000344726 RHODO00212 210 aa9.7□□□□□ -0.86
HMGN3-202ENST00000344726 IGLV2-8P01709 118 aa9.7□□□□□ -0.86
HMGN3-202ENST00000344726 ZFP82Q8N141 532 aa9.7□□□□□ -0.86
HMGN3-202ENST00000344726 Q8N3U1 123 aa9.7□□□□□ -0.86
HMGN3-202ENST00000344726 C9orf62Q8N4C0 152 aa9.7□□□□□ -0.86
HMGN3-202ENST00000344726 OR10AG1Q8NH19 301 aa9.7□□□□□ -0.86
HMGN3-202ENST00000344726 IGHV3-30P01768 117 aa9.69□□□□□ -0.86
HMGN3-202ENST00000344726 IGHV3-33P01772 117 aa9.69□□□□□ -0.86
HMGN3-202ENST00000344726 CXCL1P09341 107 aa9.69□□□□□ -0.86
HMGN3-202ENST00000344726 IGHV3-30-3P0DP02 117 aa9.69□□□□□ -0.86
HMGN3-202ENST00000344726 IGHV3-30-5P0DP03 117 aa9.69□□□□□ -0.86
HMGN3-202ENST00000344726 ERVFC1-1P60608 527 aa9.69□□□□□ -0.86
HMGN3-202ENST00000344726 CENPWQ5EE01 88 aa9.69□□□□□ -0.86
HMGN3-202ENST00000344726 AKAP14Q86UN6 197 aa9.69□□□□□ -0.86
HMGN3-202ENST00000344726 C10orf126Q8N4M7 172 aa9.69□□□□□ -0.86
HMGN3-202ENST00000344726 SSBP4Q9BWG4 385 aaPredicted RBP9.69□□□□□ -0.86
HMGN3-202ENST00000344726 A0A087WTM6 91 aa9.68□□□□□ -0.86
HMGN3-202ENST00000344726 MUC21A0A0G2JKD1 596 aa9.68□□□□□ -0.86
HMGN3-202ENST00000344726 MUC21A0A140T8X8 626 aa9.68□□□□□ -0.86
HMGN3-202ENST00000344726 RAB19A4D1S5 217 aa9.68□□□□□ -0.86
HMGN3-202ENST00000344726 IBA57-AS1B1ANH7 110 aa9.68□□□□□ -0.86
HMGN3-202ENST00000344726 SNAI2O43623 268 aa9.68□□□□□ -0.86
HMGN3-202ENST00000344726 TRBV20OR9-2A0A075B6H5 130 aa9.67□□□□□ -0.86
HMGN3-202ENST00000344726 TEX46H3BTG2 121 aa9.67□□□□□ -0.86
HMGN3-202ENST00000344726 MEF2BQ02080 365 aaPredicted RBP9.67□□□□□ -0.86
HMGN3-202ENST00000344726 DNAH8Q96JB1 4490 aa9.67□□□□□ -0.86
HMGN3-202ENST00000344726 OR5AL1P0C617 328 aa9.66□□□□□ -0.86
HMGN3-202ENST00000344726 BCL2P10415 239 aa9.66□□□□□ -0.86
HMGN3-202ENST00000344726 Q8N1X5 172 aa9.66□□□□□ -0.86
HMGN3-202ENST00000344726 Q9HAA7 133 aa9.66□□□□□ -0.86
HMGN3-202ENST00000344726 C19orf71A6NCJ1 209 aa9.65□□□□□ -0.86
HMGN3-202ENST00000344726 GZMBP10144 247 aa9.65□□□□□ -0.86
HMGN3-202ENST00000344726 MED9Q9NWA0 146 aa9.65□□□□□ -0.86
HMGN3-202ENST00000344726 LRCOL1A6NCL2 159 aa9.64□□□□□ -0.87
HMGN3-202ENST00000344726 EREGO14944 169 aa9.64□□□□□ -0.87
HMGN3-202ENST00000344726 PDE6DO43924 150 aa9.64□□□□□ -0.87
HMGN3-202ENST00000344726 IFNA1P01562 189 aa9.64□□□□□ -0.87
HMGN3-202ENST00000344726 SSTP61278 116 aa9.64□□□□□ -0.87
HMGN3-202ENST00000344726 ALKAL2Q6UX46 152 aa9.64□□□□□ -0.87
HMGN3-202ENST00000344726 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
HMGN3-202ENST00000344726 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 A0A1B0GVG6 124 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 RBFOX3A6NFN3 312 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 IGLC6P0CF74 106 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 GNG4P50150 75 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 KRTAP10-1P60331 282 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 RAB4BP61018 213 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 UBE2D3P61077 147 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 UBE2D2P62837 147 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 ZNF56Q15929 161 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 SPANXN1Q5VSR9 72 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 DAZ4Q86SG3 579 aaKnown RBP9.63□□□□□ -0.87
HMGN3-202ENST00000344726 DAZ3Q9NR90 486 aaKnown RBP9.63□□□□□ -0.87
HMGN3-202ENST00000344726 KIF25-AS1Q9Y6Z4 181 aa9.63□□□□□ -0.87
HMGN3-202ENST00000344726 A0A087WWC5 75 aa9.62□□□□□ -0.87
HMGN3-202ENST00000344726 XGP55808 180 aa9.62□□□□□ -0.87
HMGN3-202ENST00000344726 LAGE3Q14657 143 aa9.62□□□□□ -0.87
HMGN3-202ENST00000344726 CDPF1Q6NVV7 123 aa9.62□□□□□ -0.87
HMGN3-202ENST00000344726 NEXN-AS1Q8NBZ9 246 aa9.62□□□□□ -0.87
HMGN3-202ENST00000344726 OR2D3Q8NGH3 330 aa9.62□□□□□ -0.87
HMGN3-202ENST00000344726 OR10G8Q8NGN5 311 aa9.62□□□□□ -0.87
HMGN3-202ENST00000344726 SMIM12Q96EX1 92 aa9.62□□□□□ -0.87
HMGN3-202ENST00000344726 TRBV7-3A0A075B6L6 115 aa9.61□□□□□ -0.87
HMGN3-202ENST00000344726 PSCAO43653 123 aa9.61□□□□□ -0.87
HMGN3-202ENST00000344726 NKX2-5P52952 324 aaPredicted RBP9.61□□□□□ -0.87
HMGN3-202ENST00000344726 RPL36AP83881 106 aaKnown RBP9.61□□□□□ -0.87
HMGN3-202ENST00000344726 NIT1Q86X76 327 aa9.61□□□□□ -0.87
HMGN3-202ENST00000344726 FER1L6-AS1Q8NA97 138 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms