RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 TIMM17AQ99595 171 aa17.24■□□□□ 0.35
NKX2-3-201ENST00000344586 KIR2DL4Q99706 377 aa17.24■□□□□ 0.35
NKX2-3-201ENST00000344586 GNLYP22749 145 aa17.23■□□□□ 0.35
NKX2-3-201ENST00000344586 HERVK_113P61574 105 aa17.23■□□□□ 0.35
NKX2-3-201ENST00000344586 A0A0J9YY99 117 aa17.22■□□□□ 0.35
NKX2-3-201ENST00000344586 GAGE12HA6NDE8 117 aa17.22■□□□□ 0.35
NKX2-3-201ENST00000344586 SDHAF1A6NFY7 115 aa17.22■□□□□ 0.35
NKX2-3-201ENST00000344586 F5H697 171 aa17.22■□□□□ 0.35
NKX2-3-201ENST00000344586 LGALS9O00182 355 aa17.22■□□□□ 0.35
NKX2-3-201ENST00000344586 TSPAN13O95857 204 aa17.22■□□□□ 0.35
NKX2-3-201ENST00000344586 TSPEAR-AS2P59090 65 aa17.22■□□□□ 0.35
NKX2-3-201ENST00000344586 GTSF1LQ9H1H1 148 aa17.22■□□□□ 0.35
NKX2-3-201ENST00000344586 TRBV27A0A0K0K1C4 114 aa17.22■□□□□ 0.35
NKX2-3-201ENST00000344586 AZU1P20160 251 aa17.22■□□□□ 0.35
NKX2-3-201ENST00000344586 C9orf85Q96MD7 179 aa17.21■□□□□ 0.35
NKX2-3-201ENST00000344586 IGHV3-16A0A0C4DH30 117 aa17.2■□□□□ 0.34
NKX2-3-201ENST00000344586 TRBV6-5A0A0K0K1A5 114 aa17.2■□□□□ 0.34
NKX2-3-201ENST00000344586 TMEM95Q3KNT9 176 aa17.2■□□□□ 0.34
NKX2-3-201ENST00000344586 SIGMAR1Q99720 223 aa17.2■□□□□ 0.34
NKX2-3-201ENST00000344586 CCL19Q99731 98 aa17.2■□□□□ 0.34
NKX2-3-201ENST00000344586 SPATA25Q9BR10 227 aa17.2■□□□□ 0.34
NKX2-3-201ENST00000344586 INSL3P51460 131 aa17.2■□□□□ 0.34
NKX2-3-201ENST00000344586 ZNRF2Q8NHG8 242 aa17.2■□□□□ 0.34
NKX2-3-201ENST00000344586 IGHV4-30-2A0A087WSY4 118 aa17.19■□□□□ 0.34
NKX2-3-201ENST00000344586 ZNF876PQ49A33 203 aa17.19■□□□□ 0.34
NKX2-3-201ENST00000344586 FAM74A4Q5TZK3 123 aa17.19■□□□□ 0.34
NKX2-3-201ENST00000344586 CFAP126Q5VTH2 177 aa17.19■□□□□ 0.34
NKX2-3-201ENST00000344586 CLEC2AQ6UVW9 174 aa17.19■□□□□ 0.34
NKX2-3-201ENST00000344586 DLX4Q92988 240 aaPredicted RBP17.19■□□□□ 0.34
NKX2-3-201ENST00000344586 MSMBP08118 114 aa17.18■□□□□ 0.34
NKX2-3-201ENST00000344586 ODF3Q96PU9 254 aa17.18■□□□□ 0.34
NKX2-3-201ENST00000344586 MDFICQ9P1T7 246 aa17.18■□□□□ 0.34
NKX2-3-201ENST00000344586 NDUFS8O00217 210 aa17.17■□□□□ 0.34
NKX2-3-201ENST00000344586 ZNF688P0C7X2 276 aa17.17■□□□□ 0.34
NKX2-3-201ENST00000344586 SMCPP49901 116 aaPredicted RBP17.17■□□□□ 0.34
NKX2-3-201ENST00000344586 UBE2D3P61077 147 aa17.17■□□□□ 0.34
NKX2-3-201ENST00000344586 UBE2D2P62837 147 aa17.17■□□□□ 0.34
NKX2-3-201ENST00000344586 TMEM170BQ5T4T1 132 aa17.17■□□□□ 0.34
NKX2-3-201ENST00000344586 AMELXQ99217 191 aa17.17■□□□□ 0.34
NKX2-3-201ENST00000344586 TRAV12-2A0A075B6T6 113 aa17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 APOMO95445 188 aa17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 SCGB1A1P11684 91 aa17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 PSMB8P28062 276 aa17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 SFTA2Q6UW10 78 aa17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 NDUFA11Q86Y39 141 aa17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 ZNF256Q9Y2P7 627 aaPredicted RBP17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 M0QY20 66 aa17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 IGHV3-30P01768 117 aa17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 IGHV3-30-5P0DP03 117 aa17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 SMAGPQ0VAQ4 97 aa17.16■□□□□ 0.34
NKX2-3-201ENST00000344586 A0A0J9YX75 114 aa17.15■□□□□ 0.34
NKX2-3-201ENST00000344586 AVPP01185 164 aa17.15■□□□□ 0.34
NKX2-3-201ENST00000344586 ZNF580Q9UK33 172 aa17.15■□□□□ 0.34
NKX2-3-201ENST00000344586 LOC107984156A0A0G2JMH3 177 aa17.14■□□□□ 0.33
NKX2-3-201ENST00000344586 IGKV3-20P01619 116 aa17.14■□□□□ 0.33
NKX2-3-201ENST00000344586 ZNF56Q15929 161 aa17.14■□□□□ 0.33
NKX2-3-201ENST00000344586 NSUN5P1Q3KNT7 163 aa17.14■□□□□ 0.33
NKX2-3-201ENST00000344586 ARL17AQ8IVW1 177 aa17.14■□□□□ 0.33
NKX2-3-201ENST00000344586 Q8N1Y9 231 aa17.14■□□□□ 0.33
NKX2-3-201ENST00000344586 PSMB2P49721 201 aa17.14■□□□□ 0.33
NKX2-3-201ENST00000344586 SLC25A29Q8N8R3 303 aa17.14■□□□□ 0.33
NKX2-3-201ENST00000344586 SYT8Q8NBV8 401 aa17.14■□□□□ 0.33
NKX2-3-201ENST00000344586 C1QTNF4Q9BXJ3 329 aa17.14■□□□□ 0.33
NKX2-3-201ENST00000344586 C10orf99Q6UWK7 81 aa17.13■□□□□ 0.33
NKX2-3-201ENST00000344586 ATP5J2P56134 94 aa17.12■□□□□ 0.33
NKX2-3-201ENST00000344586 NFE4Q86UQ8 179 aa17.12■□□□□ 0.33
NKX2-3-201ENST00000344586 PRORYQ9H606 182 aa17.12■□□□□ 0.33
NKX2-3-201ENST00000344586 J3QQQ9 107 aa17.12■□□□□ 0.33
NKX2-3-201ENST00000344586 RHOHQ15669 191 aa17.12■□□□□ 0.33
NKX2-3-201ENST00000344586 ATP6V0E2Q8NHE4 81 aa17.12■□□□□ 0.33
NKX2-3-201ENST00000344586 OPRPNQ99935 248 aaPredicted RBP17.12■□□□□ 0.33
NKX2-3-201ENST00000344586 SPTAN1Q13813 2472 aaKnown RBP17.12■□□□□ 0.33
NKX2-3-201ENST00000344586 CFC1BP0CG36 223 aa17.11■□□□□ 0.33
NKX2-3-201ENST00000344586 CFC1P0CG37 223 aa17.11■□□□□ 0.33
NKX2-3-201ENST00000344586 K7EQG2 157 aa17.11■□□□□ 0.33
NKX2-3-201ENST00000344586 SNRPD3P62318 126 aaKnown RBP17.11■□□□□ 0.33
NKX2-3-201ENST00000344586 IGHV1OR15-1A0A075B7D0 117 aa17.1■□□□□ 0.33
NKX2-3-201ENST00000344586 P0DMU3 169 aa17.1■□□□□ 0.33
NKX2-3-201ENST00000344586 FAM231AP0DMU4 169 aa17.1■□□□□ 0.33
NKX2-3-201ENST00000344586 FAM231CP0DMU5 169 aa17.1■□□□□ 0.33
NKX2-3-201ENST00000344586 FOXI1Q12951 378 aa17.1■□□□□ 0.33
NKX2-3-201ENST00000344586 SPINK13Q1W4C9 94 aa17.1■□□□□ 0.33
NKX2-3-201ENST00000344586 TRPT1Q86TN4 253 aaKnown RBP17.1■□□□□ 0.33
NKX2-3-201ENST00000344586 ITPR1Q14643 2758 aa17.09■□□□□ 0.33
NKX2-3-201ENST00000344586 LGALS3P17931 250 aaKnown RBP17.09■□□□□ 0.33
NKX2-3-201ENST00000344586 LYRM7Q5U5X0 104 aa17.09■□□□□ 0.33
NKX2-3-201ENST00000344586 TMEM223A0PJW6 202 aa17.08■□□□□ 0.33
NKX2-3-201ENST00000344586 IGHV4-59P01825 116 aa17.08■□□□□ 0.32
NKX2-3-201ENST00000344586 TCL1BO95988 128 aa17.07■□□□□ 0.32
NKX2-3-201ENST00000344586 C10orf126Q8N4M7 172 aa17.07■□□□□ 0.32
NKX2-3-201ENST00000344586 ZNF418Q8TF45 676 aaPredicted RBP17.07■□□□□ 0.32
NKX2-3-201ENST00000344586 LEPROTO15243 131 aa17.06■□□□□ 0.32
NKX2-3-201ENST00000344586 C20orf203Q8NBC4 194 aa17.06■□□□□ 0.32
NKX2-3-201ENST00000344586 COL12A1Q99715 3063 aa17.05■□□□□ 0.32
NKX2-3-201ENST00000344586 B4DSR2 109 aa17.05■□□□□ 0.32
NKX2-3-201ENST00000344586 ZNF22P17026 224 aaPredicted RBP17.05■□□□□ 0.32
NKX2-3-201ENST00000344586 DEFB112Q30KQ8 113 aa17.05■□□□□ 0.32
NKX2-3-201ENST00000344586 I3L3M4 83 aa17.04■□□□□ 0.32
NKX2-3-201ENST00000344586 PTH2Q96A98 100 aa17.04■□□□□ 0.32
NKX2-3-201ENST00000344586 PRO1854Q9UHT4 67 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms