RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ZNRF2Q8NHG8 242 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 TMEM141Q96I45 108 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 TRGV5A0A0B4J1U4 118 aa6.24□□□□□ -1.41
ATG4A-201ENST00000343524 IGHV3-21A0A0B4J1V1 117 aa6.24□□□□□ -1.41
ATG4A-201ENST00000343524 A4D1N5 150 aa6.24□□□□□ -1.41
ATG4A-201ENST00000343524 TEX22C9J3V5 150 aa6.24□□□□□ -1.41
ATG4A-201ENST00000343524 CRYGBP07316 175 aa6.24□□□□□ -1.41
ATG4A-201ENST00000343524 SPANXN1Q5VSR9 72 aa6.24□□□□□ -1.41
ATG4A-201ENST00000343524 ZNF474Q6S9Z5 364 aaPredicted RBP6.24□□□□□ -1.41
ATG4A-201ENST00000343524 LINC00643Q86TS7 51 aa6.24□□□□□ -1.41
ATG4A-201ENST00000343524 HEATR1Q9H583 2144 aaKnown RBP6.24□□□□□ -1.41
ATG4A-201ENST00000343524 SPENQ96T58 3664 aaKnown RBP6.23□□□□□ -1.41
ATG4A-201ENST00000343524 IGHV1-18A0A0C4DH31 117 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 SDHAF1A6NFY7 115 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 ENSAO43768 121 aaKnown RBP6.23□□□□□ -1.41
ATG4A-201ENST00000343524 CRYGAP11844 174 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 COX7CP15954 63 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 CRIP2P52943 208 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-201ENST00000343524 DLX1P56177 255 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 TMEM258P61165 79 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 MRGPRG-AS1Q2M3A8 158 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 FAM216BQ8N7L0 139 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 POM121L12Q8N7R1 296 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 Q8TAT8 98 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 METTL26Q96S19 204 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 CCL13Q99616 98 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 RNF5Q99942 180 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 ADGRG4Q8IZF6 3080 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 MTORP42345 2549 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 MED13LQ71F56 2210 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 CRYBG3Q68DQ2 2970 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 CSMD1Q96PZ7 3565 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 TRGV11A0A075B6L2 103 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 A0A0J9YX75 114 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 J3QQQ9 107 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 ATOX1O00244 68 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 TRGV3P03979 118 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 C3orf36Q3SXR2 165 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 GAGE2AQ6NT46 116 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 SAP25Q8TEE9 199 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 IGFBPL1Q8WX77 278 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 ZNRD1Q9P1U0 126 aa6.23□□□□□ -1.41
ATG4A-201ENST00000343524 SPG11Q96JI7 2443 aa6.22□□□□□ -1.41
ATG4A-201ENST00000343524 RAI1Q7Z5J4 1906 aaPredicted RBP6.22□□□□□ -1.41
ATG4A-201ENST00000343524 K7EIM0 57 aa6.22□□□□□ -1.41
ATG4A-201ENST00000343524 SPRY3O43610 288 aa6.22□□□□□ -1.41
ATG4A-201ENST00000343524 IGHV4-39P01824 125 aa6.22□□□□□ -1.41
ATG4A-201ENST00000343524 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
ATG4A-201ENST00000343524 TIMM17AQ99595 171 aa6.22□□□□□ -1.41
ATG4A-201ENST00000343524 KLK15Q9H2R5 256 aa6.22□□□□□ -1.41
ATG4A-201ENST00000343524 DPH3P1Q9H4G8 78 aa6.22□□□□□ -1.41
ATG4A-201ENST00000343524 CELSR1Q9NYQ6 3014 aa6.21□□□□□ -1.41
ATG4A-201ENST00000343524 IGLV4-69A0A075B6H9 119 aa6.21□□□□□ -1.41
ATG4A-201ENST00000343524 IGLV3-9A0A075B6K5 115 aa6.21□□□□□ -1.41
ATG4A-201ENST00000343524 TRAV17A0A0B4J275 112 aa6.21□□□□□ -1.41
ATG4A-201ENST00000343524 NTN3O00634 580 aaPredicted RBP6.21□□□□□ -1.41
ATG4A-201ENST00000343524 LEPROTO15243 131 aa6.21□□□□□ -1.41
ATG4A-201ENST00000343524 CCL4P13236 92 aa6.21□□□□□ -1.41
ATG4A-201ENST00000343524 MFAP4P55083 255 aa6.21□□□□□ -1.41
ATG4A-201ENST00000343524 KLHL30-AS1Q8NEE0 82 aa6.21□□□□□ -1.41
ATG4A-201ENST00000343524 MRPL53Q96EL3 112 aaKnown RBP6.21□□□□□ -1.41
ATG4A-201ENST00000343524 HES7Q9BYE0 225 aa6.21□□□□□ -1.41
ATG4A-201ENST00000343524 TNCP24821 2201 aa6.21□□□□□ -1.42
ATG4A-201ENST00000343524 TRAV26-2A0A0B4J265 109 aa6.21□□□□□ -1.42
ATG4A-201ENST00000343524 IGHV7-4-1A0A0J9YVY3 117 aa6.21□□□□□ -1.42
ATG4A-201ENST00000343524 OOSP1A8MZH6 123 aa6.21□□□□□ -1.42
ATG4A-201ENST00000343524 MED14OSP0DP75 135 aa6.21□□□□□ -1.42
ATG4A-201ENST00000343524 DLX6P56179 175 aa6.21□□□□□ -1.42
ATG4A-201ENST00000343524 DUX4L9Q6RFH8 374 aaPredicted RBP6.21□□□□□ -1.42
ATG4A-201ENST00000343524 Q6ZS46 218 aa6.21□□□□□ -1.42
ATG4A-201ENST00000343524 CFHR4Q92496 578 aa6.21□□□□□ -1.42
ATG4A-201ENST00000343524 ICOSQ9Y6W8 199 aa6.21□□□□□ -1.42
ATG4A-201ENST00000343524 KNL1Q8NG31 2342 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 A0A0G2JNJ9 132 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 A0A1W2PNU3 283 aaPredicted RBP6.2□□□□□ -1.42
ATG4A-201ENST00000343524 C17orf100A8MU93 164 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 H7C423 109 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 TRIAP1O43715 76 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 TRACP01848 142 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 ZNF575Q86XF7 245 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 CNEP1R1Q8N9A8 125 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 DYNLRB1Q9NP97 96 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 SPRR3Q9UBC9 169 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 Q9UFV3 132 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 LINC00527Q9UJ94 153 aa6.2□□□□□ -1.42
ATG4A-201ENST00000343524 SVILO95425 2214 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 IGKV3D-20A0A0C4DH25 116 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 LOC107984640A0A0U1RRK4 108 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 H7C2G1 150 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 LST1O00453 97 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 CCL3L1P16619 93 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 MDS2Q8NDY4 140 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 DEFB108BQ8NET1 73 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 NDUFB3O43676 98 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 TMEM200BQ69YZ2 307 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 C3orf56Q8N813 242 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 AMELXQ99217 191 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
ATG4A-201ENST00000343524 EDA2RQ9HAV5 297 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms