RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 PRR34Q9NV39 138 aa10.65□□□□□ -0.7
TRA2B-202ENST00000342294 A0A087WWL8 130 aa10.64□□□□□ -0.71
TRA2B-202ENST00000342294 K7EQM0 130 aa10.64□□□□□ -0.71
TRA2B-202ENST00000342294 H2AFB2P0C5Z0 115 aa10.64□□□□□ -0.71
TRA2B-202ENST00000342294 CHTF8P0CG12 524 aa10.64□□□□□ -0.71
TRA2B-202ENST00000342294 DNLZQ5SXM8 178 aa10.64□□□□□ -0.71
TRA2B-202ENST00000342294 SPACA4Q8TDM5 124 aa10.64□□□□□ -0.71
TRA2B-202ENST00000342294 SFRP2Q96HF1 295 aa10.64□□□□□ -0.71
TRA2B-202ENST00000342294 PLAC8Q9NZF1 115 aa10.64□□□□□ -0.71
TRA2B-202ENST00000342294 A0A1W2PPV4 95 aa10.63□□□□□ -0.71
TRA2B-202ENST00000342294 H3BVH4 76 aa10.63□□□□□ -0.71
TRA2B-202ENST00000342294 HMGB3O15347 200 aaKnown RBP10.63□□□□□ -0.71
TRA2B-202ENST00000342294 SIX6O95475 246 aa10.63□□□□□ -0.71
TRA2B-202ENST00000342294 SAPCD1Q5SSQ6 148 aa10.63□□□□□ -0.71
TRA2B-202ENST00000342294 OR10G8Q8NGN5 311 aa10.63□□□□□ -0.71
TRA2B-202ENST00000342294 SUN5Q8TC36 379 aa10.63□□□□□ -0.71
TRA2B-202ENST00000342294 SCGB1C1Q8TD33 95 aa10.63□□□□□ -0.71
TRA2B-202ENST00000342294 DPH3Q96FX2 82 aa10.63□□□□□ -0.71
TRA2B-202ENST00000342294 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
TRA2B-202ENST00000342294 FABP5P3A8MUU1 101 aa10.62□□□□□ -0.71
TRA2B-202ENST00000342294 ARMS2P0C7Q2 107 aa10.62□□□□□ -0.71
TRA2B-202ENST00000342294 ARL14EPLP0DKL9 152 aa10.62□□□□□ -0.71
TRA2B-202ENST00000342294 RAB2AP61019 212 aa10.62□□□□□ -0.71
TRA2B-202ENST00000342294 LRRC37A5PQ49AS3 106 aa10.62□□□□□ -0.71
TRA2B-202ENST00000342294 WDR73Q6P4I2 378 aa10.62□□□□□ -0.71
TRA2B-202ENST00000342294 OR11H4Q8NGC9 324 aa10.62□□□□□ -0.71
TRA2B-202ENST00000342294 EPDR1Q9UM22 224 aa10.62□□□□□ -0.71
TRA2B-202ENST00000342294 HSPB11Q9Y547 144 aa10.62□□□□□ -0.71
TRA2B-202ENST00000342294 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
TRA2B-202ENST00000342294 CCDC160A6NGH7 325 aa10.61□□□□□ -0.71
TRA2B-202ENST00000342294 SLPIP03973 132 aa10.61□□□□□ -0.71
TRA2B-202ENST00000342294 KRTAP9-2Q9BYQ4 174 aa10.61□□□□□ -0.71
TRA2B-202ENST00000342294 B4DEV8 164 aa10.6□□□□□ -0.71
TRA2B-202ENST00000342294 PTTG1O95997 202 aa10.6□□□□□ -0.71
TRA2B-202ENST00000342294 SUMO1P63165 101 aaKnown RBP10.6□□□□□ -0.71
TRA2B-202ENST00000342294 C7orf33Q8WU49 177 aa10.6□□□□□ -0.71
TRA2B-202ENST00000342294 KRBOX1C9JBD0 128 aa10.59□□□□□ -0.71
TRA2B-202ENST00000342294 STAG3L2P0CL84 134 aa10.59□□□□□ -0.71
TRA2B-202ENST00000342294 STAG3L3P0CL85 134 aa10.59□□□□□ -0.71
TRA2B-202ENST00000342294 PKIAP61925 76 aa10.59□□□□□ -0.71
TRA2B-202ENST00000342294 PRR3P79522 188 aaKnown RBP10.59□□□□□ -0.71
TRA2B-202ENST00000342294 CHCHD5Q9BSY4 110 aa10.59□□□□□ -0.71
TRA2B-202ENST00000342294 SMIM3Q9BZL3 60 aa10.59□□□□□ -0.71
TRA2B-202ENST00000342294 WFDC1Q9HC57 220 aa10.59□□□□□ -0.71
TRA2B-202ENST00000342294 hDV102S1A0JD36 115 aa10.58□□□□□ -0.72
TRA2B-202ENST00000342294 CRIP1P50238 77 aa10.58□□□□□ -0.72
TRA2B-202ENST00000342294 RBX1P62877 108 aa10.58□□□□□ -0.72
TRA2B-202ENST00000342294 CLPSL2Q6UWE3 100 aa10.58□□□□□ -0.72
TRA2B-202ENST00000342294 LINC00269Q8N2A0 174 aa10.58□□□□□ -0.72
TRA2B-202ENST00000342294 NEXN-AS1Q8NBZ9 246 aa10.58□□□□□ -0.72
TRA2B-202ENST00000342294 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
TRA2B-202ENST00000342294 GRIFINA4D1Z8 144 aa10.57□□□□□ -0.72
TRA2B-202ENST00000342294 GCHFRP30047 84 aa10.57□□□□□ -0.72
TRA2B-202ENST00000342294 PRR27Q6MZM9 219 aa10.57□□□□□ -0.72
TRA2B-202ENST00000342294 NTM-AS1Q6ZSK4 140 aa10.57□□□□□ -0.72
TRA2B-202ENST00000342294 PHLDA3Q9Y5J5 127 aa10.57□□□□□ -0.72
TRA2B-202ENST00000342294 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.56□□□□□ -0.72
TRA2B-202ENST00000342294 TRAV34A0A0B4J273 112 aa10.56□□□□□ -0.72
TRA2B-202ENST00000342294 M0R381 172 aa10.56□□□□□ -0.72
TRA2B-202ENST00000342294 CYCSP99999 105 aaKnown RBP10.56□□□□□ -0.72
TRA2B-202ENST00000342294 M0R036 132 aa10.55□□□□□ -0.72
TRA2B-202ENST00000342294 CDC34P49427 236 aaPredicted RBP10.55□□□□□ -0.72
TRA2B-202ENST00000342294 RAB4BP61018 213 aa10.55□□□□□ -0.72
TRA2B-202ENST00000342294 SPINK6Q6UWN8 80 aa10.55□□□□□ -0.72
TRA2B-202ENST00000342294 PPP1R1CQ8WVI7 109 aa10.55□□□□□ -0.72
TRA2B-202ENST00000342294 RAB24Q969Q5 203 aa10.55□□□□□ -0.72
TRA2B-202ENST00000342294 TPT1P13693 172 aaKnown RBP10.54□□□□□ -0.72
TRA2B-202ENST00000342294 RPL12P30050 165 aaKnown RBP10.54□□□□□ -0.72
TRA2B-202ENST00000342294 REG3GQ6UW15 175 aa10.54□□□□□ -0.72
TRA2B-202ENST00000342294 ZFP82Q8N141 532 aa10.54□□□□□ -0.72
TRA2B-202ENST00000342294 GTSF1Q8WW33 167 aa10.54□□□□□ -0.72
TRA2B-202ENST00000342294 AP5S1Q9NUS5 200 aa10.54□□□□□ -0.72
TRA2B-202ENST00000342294 IGLV10-54A0A075B6I4 117 aa10.53□□□□□ -0.72
TRA2B-202ENST00000342294 FAM240BA0A1B0GVZ2 78 aa10.53□□□□□ -0.72
TRA2B-202ENST00000342294 H2BFSP57053 126 aa10.53□□□□□ -0.72
TRA2B-202ENST00000342294 GAGE6Q13070 117 aa10.53□□□□□ -0.72
TRA2B-202ENST00000342294 COX8CQ7Z4L0 72 aa10.53□□□□□ -0.72
TRA2B-202ENST00000342294 VAX2Q9UIW0 290 aa10.53□□□□□ -0.72
TRA2B-202ENST00000342294 SH2D1AO60880 128 aa10.52□□□□□ -0.73
TRA2B-202ENST00000342294 MPC2O95563 127 aa10.52□□□□□ -0.73
TRA2B-202ENST00000342294 REG3AQ06141 175 aa10.52□□□□□ -0.73
TRA2B-202ENST00000342294 SRSF9Q13242 221 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRA2B-202ENST00000342294 TMEM97Q5BJF2 176 aa10.52□□□□□ -0.73
TRA2B-202ENST00000342294 Q86TA4 180 aa10.52□□□□□ -0.73
TRA2B-202ENST00000342294 TMEM167BQ9NRX6 74 aa10.52□□□□□ -0.73
TRA2B-202ENST00000342294 MUC21A0A0G2JKD1 596 aa10.51□□□□□ -0.73
TRA2B-202ENST00000342294 A0A1W2PRE2 83 aa10.51□□□□□ -0.73
TRA2B-202ENST00000342294 COX6A2Q02221 97 aa10.51□□□□□ -0.73
TRA2B-202ENST00000342294 LPAP08519 4548 aa10.51□□□□□ -0.73
TRA2B-202ENST00000342294 TRAV8-4A0A0B4J246 113 aa10.5□□□□□ -0.73
TRA2B-202ENST00000342294 P01737 135 aa10.5□□□□□ -0.73
TRA2B-202ENST00000342294 LINC01559Q495D7 138 aa10.5□□□□□ -0.73
TRA2B-202ENST00000342294 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.5□□□□□ -0.73
TRA2B-202ENST00000342294 C20orf203Q8NBC4 194 aa10.5□□□□□ -0.73
TRA2B-202ENST00000342294 TMSB15BA0A087X1C1 80 aa10.49□□□□□ -0.73
TRA2B-202ENST00000342294 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
TRA2B-202ENST00000342294 CXorf1O96002 111 aa10.49□□□□□ -0.73
TRA2B-202ENST00000342294 GZMBP10144 247 aa10.49□□□□□ -0.73
TRA2B-202ENST00000342294 ZNF56Q15929 161 aa10.49□□□□□ -0.73
TRA2B-202ENST00000342294 IQCJQ1A5X6 159 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms