RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 PLNP26678 52 aa9.29□□□□□ -0.92
UBE2L3-201ENST00000342192 RNASE4P34096 147 aaKnown RBP9.29□□□□□ -0.92
UBE2L3-201ENST00000342192 Q6ZS46 218 aa9.29□□□□□ -0.92
UBE2L3-201ENST00000342192 PRO0461Q9UI25 63 aa9.29□□□□□ -0.92
UBE2L3-201ENST00000342192 IGHV4-30-2A0A087WSY4 118 aa9.29□□□□□ -0.92
UBE2L3-201ENST00000342192 C14orf178Q8N769 122 aaPredicted RBP9.29□□□□□ -0.92
UBE2L3-201ENST00000342192 DAZ1Q9NQZ3 744 aaKnown RBP9.29□□□□□ -0.92
UBE2L3-201ENST00000342192 VPREB3Q9UKI3 123 aa9.29□□□□□ -0.92
UBE2L3-201ENST00000342192 MSMBP08118 114 aa9.28□□□□□ -0.92
UBE2L3-201ENST00000342192 IGKV3-7A0A075B6H7 116 aa9.28□□□□□ -0.92
UBE2L3-201ENST00000342192 TGFAP01135 160 aa9.28□□□□□ -0.92
UBE2L3-201ENST00000342192 CFHR3Q02985 330 aa9.28□□□□□ -0.92
UBE2L3-201ENST00000342192 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
UBE2L3-201ENST00000342192 RPL39LQ96EH5 51 aaKnown RBP9.28□□□□□ -0.92
UBE2L3-201ENST00000342192 CFAP46Q8IYW2 2715 aa9.28□□□□□ -0.92
UBE2L3-201ENST00000342192 RNF223E7ERA6 249 aa9.27□□□□□ -0.93
UBE2L3-201ENST00000342192 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
UBE2L3-201ENST00000342192 F8VRH5 84 aa9.27□□□□□ -0.93
UBE2L3-201ENST00000342192 MGPP08493 103 aa9.27□□□□□ -0.93
UBE2L3-201ENST00000342192 AGRNO00468 2067 aa9.27□□□□□ -0.93
UBE2L3-201ENST00000342192 VPS13CQ709C8 3753 aa9.26□□□□□ -0.93
UBE2L3-201ENST00000342192 H7C1H1 209 aa9.26□□□□□ -0.93
UBE2L3-201ENST00000342192 GNRH2O43555 120 aa9.26□□□□□ -0.93
UBE2L3-201ENST00000342192 NXPH4O95158 308 aa9.26□□□□□ -0.93
UBE2L3-201ENST00000342192 FAM159AQ6UWV7 190 aa9.26□□□□□ -0.93
UBE2L3-201ENST00000342192 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
UBE2L3-201ENST00000342192 SMCPP49901 116 aaPredicted RBP9.26□□□□□ -0.93
UBE2L3-201ENST00000342192 POM121L12Q8N7R1 296 aa9.26□□□□□ -0.93
UBE2L3-201ENST00000342192 MAPKAPK5-AS1Q8N8E1 139 aa9.26□□□□□ -0.93
UBE2L3-201ENST00000342192 ACACBO00763 2458 aa9.25□□□□□ -0.93
UBE2L3-201ENST00000342192 KLLNB2CW77 178 aa9.25□□□□□ -0.93
UBE2L3-201ENST00000342192 CEND1Q8N111 149 aa9.25□□□□□ -0.93
UBE2L3-201ENST00000342192 NEXN-AS1Q8NBZ9 246 aa9.25□□□□□ -0.93
UBE2L3-201ENST00000342192 K7EMT4 169 aa9.25□□□□□ -0.93
UBE2L3-201ENST00000342192 PPP1R17O96001 155 aa9.25□□□□□ -0.93
UBE2L3-201ENST00000342192 EDN2P20800 178 aa9.25□□□□□ -0.93
UBE2L3-201ENST00000342192 C12orf74Q32Q52 190 aa9.25□□□□□ -0.93
UBE2L3-201ENST00000342192 ZNF580Q9UK33 172 aa9.25□□□□□ -0.93
UBE2L3-201ENST00000342192 NDUFV3P56181 108 aaKnown RBP9.24□□□□□ -0.93
UBE2L3-201ENST00000342192 TTC32Q5I0X7 151 aa9.24□□□□□ -0.93
UBE2L3-201ENST00000342192 C2orf66Q6UXQ4 117 aa9.24□□□□□ -0.93
UBE2L3-201ENST00000342192 LOC107984156A0A0G2JMH3 177 aa9.24□□□□□ -0.93
UBE2L3-201ENST00000342192 SRD5A1P18405 259 aa9.24□□□□□ -0.93
UBE2L3-201ENST00000342192 PSMB2P49721 201 aa9.24□□□□□ -0.93
UBE2L3-201ENST00000342192 ARL17AQ8IVW1 177 aa9.24□□□□□ -0.93
UBE2L3-201ENST00000342192 CELSR1Q9NYQ6 3014 aa9.24□□□□□ -0.93
UBE2L3-201ENST00000342192 SPTAN1Q13813 2472 aaKnown RBP9.24□□□□□ -0.93
UBE2L3-201ENST00000342192 AVPP01185 164 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 TAL2Q16559 108 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 RAX2Q96IS3 184 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 KIF25-AS1Q9Y6Z4 181 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 GAGE2BQ13066 116 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 GAGE2EQ4V326 116 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 MEIG1Q5JSS6 88 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 GAGE2DQ9UEU5 116 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 IGSF10Q6WRI0 2623 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 B4DSR2 109 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 BAALCQ8WXS3 180 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 CARD19Q96LW7 228 aa9.23□□□□□ -0.93
UBE2L3-201ENST00000342192 TRAV4A0A0B4J268 109 aa9.22□□□□□ -0.93
UBE2L3-201ENST00000342192 PSMB8P28062 276 aa9.22□□□□□ -0.93
UBE2L3-201ENST00000342192 LINC00315P59091 139 aa9.22□□□□□ -0.93
UBE2L3-201ENST00000342192 HIST1H4GQ99525 98 aa9.22□□□□□ -0.93
UBE2L3-201ENST00000342192 CRLF1O75462 422 aa9.21□□□□□ -0.93
UBE2L3-201ENST00000342192 MRPL23Q16540 153 aaKnown RBP9.21□□□□□ -0.93
UBE2L3-201ENST00000342192 RRN3P1Q2M238 152 aa9.21□□□□□ -0.93
UBE2L3-201ENST00000342192 ZFYVE26Q68DK2 2539 aa9.21□□□□□ -0.93
UBE2L3-201ENST00000342192 IGHV4OR15-8A0A075B7B6 117 aa9.21□□□□□ -0.94
UBE2L3-201ENST00000342192 A0A087WW49 117 aa9.21□□□□□ -0.94
UBE2L3-201ENST00000342192 LINC01619G3V211 115 aa9.21□□□□□ -0.94
UBE2L3-201ENST00000342192 MUC4Q99102 2169 aa9.21□□□□□ -0.94
UBE2L3-201ENST00000342192 CFAP126Q5VTH2 177 aa9.21□□□□□ -0.94
UBE2L3-201ENST00000342192 MYMXA0A1B0GTQ4 84 aa9.2□□□□□ -0.94
UBE2L3-201ENST00000342192 ZFP2Q6ZN57 461 aa9.2□□□□□ -0.94
UBE2L3-201ENST00000342192 TRBV7-3A0A075B6L6 115 aa9.2□□□□□ -0.94
UBE2L3-201ENST00000342192 SUMO4Q6EEV6 95 aa9.2□□□□□ -0.94
UBE2L3-201ENST00000342192 LOC107984640A0A0U1RRK4 108 aa9.19□□□□□ -0.94
UBE2L3-201ENST00000342192 SNCGO76070 127 aa9.19□□□□□ -0.94
UBE2L3-201ENST00000342192 IFITM1P13164 125 aa9.19□□□□□ -0.94
UBE2L3-201ENST00000342192 ODF3Q96PU9 254 aa9.19□□□□□ -0.94
UBE2L3-201ENST00000342192 TRAV12-3A0A0B4J271 114 aa9.19□□□□□ -0.94
UBE2L3-201ENST00000342192 IGHV4-59P01825 116 aa9.19□□□□□ -0.94
UBE2L3-201ENST00000342192 CD7P09564 240 aa9.19□□□□□ -0.94
UBE2L3-201ENST00000342192 JPT2Q9H910 190 aa9.19□□□□□ -0.94
UBE2L3-201ENST00000342192 CSDC2Q9Y534 153 aaKnown RBP9.19□□□□□ -0.94
UBE2L3-201ENST00000342192 UTP20O75691 2785 aaKnown RBP9.19□□□□□ -0.94
UBE2L3-201ENST00000342192 DUSP14O95147 198 aaKnown RBP9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 DEFB112Q30KQ8 113 aa9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 FLNCQ14315 2725 aa9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 TMEM89A2RUT3 159 aa9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 POLR2KP53803 58 aaKnown RBP9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 DSCR9P59020 149 aa9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 SRSF9Q13242 221 aaKnown RBP eCLIP9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 PPDPFLQ8WWR9 84 aa9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 LINC01549A6NIU2 74 aa9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 RHODO00212 210 aa9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 ZNF688P0C7X2 276 aa9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 C10orf99Q6UWK7 81 aa9.18□□□□□ -0.94
UBE2L3-201ENST00000342192 PRADC1Q9BSG0 188 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms