RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 AKR1C3P42330 323 aa13.64□□□□□ -0.23
SYNE2-201ENST00000341472 ERVFC1-1P60608 527 aa13.64□□□□□ -0.23
SYNE2-201ENST00000341472 OR10J3Q5JRS4 329 aa13.64□□□□□ -0.23
SYNE2-201ENST00000341472 DNLZQ5SXM8 178 aa13.64□□□□□ -0.23
SYNE2-201ENST00000341472 ATP6V0E2Q8NHE4 81 aa13.64□□□□□ -0.23
SYNE2-201ENST00000341472 PARLQ9H300 379 aa13.64□□□□□ -0.23
SYNE2-201ENST00000341472 GRIFINA4D1Z8 144 aa13.63□□□□□ -0.23
SYNE2-201ENST00000341472 TMEM250H0YL14 139 aa13.63□□□□□ -0.23
SYNE2-201ENST00000341472 DMRTA1Q5VZB9 504 aa13.63□□□□□ -0.23
SYNE2-201ENST00000341472 SYT8Q8NBV8 401 aa13.63□□□□□ -0.23
SYNE2-201ENST00000341472 GTSF1LQ9H1H1 148 aa13.63□□□□□ -0.23
SYNE2-201ENST00000341472 H3BVH4 76 aa13.62□□□□□ -0.23
SYNE2-201ENST00000341472 LTAP01374 205 aa13.62□□□□□ -0.23
SYNE2-201ENST00000341472 S100A9P06702 114 aaKnown RBP13.62□□□□□ -0.23
SYNE2-201ENST00000341472 ZNF674Q2M3X9 581 aa13.62□□□□□ -0.23
SYNE2-201ENST00000341472 UQCC3Q6UW78 93 aa13.62□□□□□ -0.23
SYNE2-201ENST00000341472 C11orf52Q96A22 123 aa13.62□□□□□ -0.23
SYNE2-201ENST00000341472 JPT2Q9H910 190 aa13.62□□□□□ -0.23
SYNE2-201ENST00000341472 A0A087WTM6 91 aa13.61□□□□□ -0.23
SYNE2-201ENST00000341472 NDUFA5Q16718 116 aa13.61□□□□□ -0.23
SYNE2-201ENST00000341472 LINC01556Q5JQF7 62 aa13.61□□□□□ -0.23
SYNE2-201ENST00000341472 LELP1Q5T871 98 aa13.61□□□□□ -0.23
SYNE2-201ENST00000341472 SAMD10Q9BYL1 202 aa13.61□□□□□ -0.23
SYNE2-201ENST00000341472 APOBP04114 4563 aaKnown RBP13.61□□□□□ -0.23
SYNE2-201ENST00000341472 TMSB15BA0A087X1C1 80 aa13.6□□□□□ -0.23
SYNE2-201ENST00000341472 GAGE12JA6NER3 117 aa13.6□□□□□ -0.23
SYNE2-201ENST00000341472 GAGE1Q13065 139 aa13.6□□□□□ -0.23
SYNE2-201ENST00000341472 GAGE4Q13068 117 aa13.6□□□□□ -0.23
SYNE2-201ENST00000341472 GAGE5Q13069 117 aa13.6□□□□□ -0.23
SYNE2-201ENST00000341472 GAGE13Q4V321 117 aa13.6□□□□□ -0.23
SYNE2-201ENST00000341472 COMMD7Q86VX2 200 aa13.6□□□□□ -0.23
SYNE2-201ENST00000341472 PHLDA3Q9Y5J5 127 aa13.6□□□□□ -0.23
SYNE2-201ENST00000341472 SCO2A0A1W2PP80 73 aa13.59□□□□□ -0.23
SYNE2-201ENST00000341472 SRP19P09132 144 aaKnown RBP13.59□□□□□ -0.23
SYNE2-201ENST00000341472 LINC01559Q495D7 138 aa13.59□□□□□ -0.23
SYNE2-201ENST00000341472 IBA57-AS1B1ANH7 110 aa13.58□□□□□ -0.24
SYNE2-201ENST00000341472 RHODO00212 210 aa13.58□□□□□ -0.24
SYNE2-201ENST00000341472 UFSP1Q6NVU6 142 aa13.58□□□□□ -0.24
SYNE2-201ENST00000341472 MAPKAPK5-AS1Q8N8E1 139 aa13.58□□□□□ -0.24
SYNE2-201ENST00000341472 KRTAP4-5Q9BYR2 181 aa13.58□□□□□ -0.24
SYNE2-201ENST00000341472 SCRT2Q9NQ03 307 aa13.58□□□□□ -0.24
SYNE2-201ENST00000341472 FUSP35637 526 aaKnown RBP eCLIP13.57□□□□□ -0.24
SYNE2-201ENST00000341472 SRSF3P84103 164 aaKnown RBP13.57□□□□□ -0.24
SYNE2-201ENST00000341472 BAGE2Q86Y30 109 aa13.57□□□□□ -0.24
SYNE2-201ENST00000341472 C14orf178Q8N769 122 aaPredicted RBP13.57□□□□□ -0.24
SYNE2-201ENST00000341472 ABCA13Q86UQ4 5058 aa13.57□□□□□ -0.24
SYNE2-201ENST00000341472 IGHV3-30P01768 117 aa13.56□□□□□ -0.24
SYNE2-201ENST00000341472 IGHV3-33P01772 117 aa13.56□□□□□ -0.24
SYNE2-201ENST00000341472 IGHV3-30-3P0DP02 117 aa13.56□□□□□ -0.24
SYNE2-201ENST00000341472 IGHV3-30-5P0DP03 117 aa13.56□□□□□ -0.24
SYNE2-201ENST00000341472 CDPF1Q6NVV7 123 aa13.56□□□□□ -0.24
SYNE2-201ENST00000341472 SFRP2Q96HF1 295 aa13.56□□□□□ -0.24
SYNE2-201ENST00000341472 Q9UF83 564 aa13.56□□□□□ -0.24
SYNE2-201ENST00000341472 M0R381 172 aa13.55□□□□□ -0.24
SYNE2-201ENST00000341472 PSCAO43653 123 aa13.55□□□□□ -0.24
SYNE2-201ENST00000341472 FAM74A4Q5TZK3 123 aa13.55□□□□□ -0.24
SYNE2-201ENST00000341472 ZFP82Q8N141 532 aa13.55□□□□□ -0.24
SYNE2-201ENST00000341472 A0A087WWL8 130 aa13.54□□□□□ -0.24
SYNE2-201ENST00000341472 RPL35P42766 123 aaKnown RBP13.54□□□□□ -0.24
SYNE2-201ENST00000341472 CEBPGP53567 150 aa13.54□□□□□ -0.24
SYNE2-201ENST00000341472 FAM74A3Q4VXF1 159 aa13.54□□□□□ -0.24
SYNE2-201ENST00000341472 MLST8Q9BVC4 326 aa13.54□□□□□ -0.24
SYNE2-201ENST00000341472 A0A087WWC5 75 aa13.53□□□□□ -0.24
SYNE2-201ENST00000341472 C9JQL5 133 aa13.53□□□□□ -0.24
SYNE2-201ENST00000341472 LINC00694P0DN24 101 aa13.53□□□□□ -0.24
SYNE2-201ENST00000341472 Q9HAA7 133 aa13.53□□□□□ -0.24
SYNE2-201ENST00000341472 ZNF727A8MUV8 499 aa13.51□□□□□ -0.25
SYNE2-201ENST00000341472 Q8N1X5 172 aa13.51□□□□□ -0.25
SYNE2-201ENST00000341472 SMIM12Q96EX1 92 aa13.51□□□□□ -0.25
SYNE2-201ENST00000341472 SMIM7Q9BQ49 75 aa13.51□□□□□ -0.25
SYNE2-201ENST00000341472 DERL1Q9BUN8 251 aa13.51□□□□□ -0.25
SYNE2-201ENST00000341472 TMEM218A2RU14 115 aa13.5□□□□□ -0.25
SYNE2-201ENST00000341472 CXCL1P09341 107 aa13.5□□□□□ -0.25
SYNE2-201ENST00000341472 GNG4P50150 75 aa13.5□□□□□ -0.25
SYNE2-201ENST00000341472 RPL19P84098 196 aaKnown RBP13.5□□□□□ -0.25
SYNE2-201ENST00000341472 CENPWQ5EE01 88 aa13.49□□□□□ -0.25
SYNE2-201ENST00000341472 PRR27Q6MZM9 219 aa13.49□□□□□ -0.25
SYNE2-201ENST00000341472 TM2D2Q9BX73 214 aa13.49□□□□□ -0.25
SYNE2-201ENST00000341472 TRBV10-1A0A0K0K1A3 114 aa13.48□□□□□ -0.25
SYNE2-201ENST00000341472 LRCOL1A6NCL2 159 aa13.48□□□□□ -0.25
SYNE2-201ENST00000341472 LAGE3Q14657 143 aa13.48□□□□□ -0.25
SYNE2-201ENST00000341472 TMEM241Q24JQ0 296 aa13.48□□□□□ -0.25
SYNE2-201ENST00000341472 BIN3Q9NQY0 253 aa13.48□□□□□ -0.25
SYNE2-201ENST00000341472 GCSHP23434 173 aa13.47□□□□□ -0.25
SYNE2-201ENST00000341472 KRTAP10-1P60331 282 aa13.47□□□□□ -0.25
SYNE2-201ENST00000341472 RPL36AP83881 106 aaKnown RBP13.47□□□□□ -0.25
SYNE2-201ENST00000341472 SLC7A5P1Q8MH63 180 aa13.47□□□□□ -0.25
SYNE2-201ENST00000341472 Q8N3U1 123 aa13.47□□□□□ -0.25
SYNE2-201ENST00000341472 OR10AG1Q8NH19 301 aa13.47□□□□□ -0.25
SYNE2-201ENST00000341472 RPL36ALQ969Q0 106 aaKnown RBP13.47□□□□□ -0.25
SYNE2-201ENST00000341472 SSBP4Q9BWG4 385 aaPredicted RBP13.47□□□□□ -0.25
SYNE2-201ENST00000341472 TRAV8-3A0A0A6YYJ7 113 aa13.46□□□□□ -0.25
SYNE2-201ENST00000341472 RAB4BP61018 213 aa13.46□□□□□ -0.25
SYNE2-201ENST00000341472 DAZ4Q86SG3 579 aaKnown RBP13.46□□□□□ -0.25
SYNE2-201ENST00000341472 SEC11CQ9BY50 192 aa13.46□□□□□ -0.25
SYNE2-201ENST00000341472 DAZ3Q9NR90 486 aaKnown RBP13.46□□□□□ -0.25
SYNE2-201ENST00000341472 NAT8Q9UHE5 227 aa13.46□□□□□ -0.25
SYNE2-201ENST00000341472 TRBV20OR9-2A0A075B6H5 130 aa13.45□□□□□ -0.26
SYNE2-201ENST00000341472 TRBV7-3A0A075B6L6 115 aa13.45□□□□□ -0.26
SYNE2-201ENST00000341472 MUC21A0A0G2JKD1 596 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms