RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 C9orf66Q5T8R8 295 aa12.52□□□□□ -0.4
RTL6-201ENST00000341255 TNCP24821 2201 aa12.52□□□□□ -0.41
RTL6-201ENST00000341255 PLXNB3Q9ULL4 1909 aa12.52□□□□□ -0.41
RTL6-201ENST00000341255 DAZAP2Q15038 168 aaPredicted RBP12.52□□□□□ -0.41
RTL6-201ENST00000341255 CSPG4Q6UVK1 2322 aa12.52□□□□□ -0.41
RTL6-201ENST00000341255 CHD3Q12873 2000 aaKnown RBP12.52□□□□□ -0.41
RTL6-201ENST00000341255 IGKV2D-24A0A075B6R9 120 aa12.52□□□□□ -0.41
RTL6-201ENST00000341255 TRAV4A0A0B4J268 109 aa12.52□□□□□ -0.41
RTL6-201ENST00000341255 PLA2G5P39877 138 aa12.52□□□□□ -0.41
RTL6-201ENST00000341255 Q6ZQT7 251 aa12.52□□□□□ -0.41
RTL6-201ENST00000341255 C16orf74Q96GX8 76 aa12.52□□□□□ -0.41
RTL6-201ENST00000341255 RBM3P98179 157 aaKnown RBP12.51□□□□□ -0.41
RTL6-201ENST00000341255 TOMM6Q96B49 74 aa12.51□□□□□ -0.41
RTL6-201ENST00000341255 hADV29S1A0JD25 119 aa12.51□□□□□ -0.41
RTL6-201ENST00000341255 CTRLP40313 264 aa12.51□□□□□ -0.41
RTL6-201ENST00000341255 FOXI1Q12951 378 aa12.51□□□□□ -0.41
RTL6-201ENST00000341255 DAND5Q8N907 189 aa12.51□□□□□ -0.41
RTL6-201ENST00000341255 ODF1Q14990 250 aa12.5□□□□□ -0.41
RTL6-201ENST00000341255 WNK1Q9H4A3 2382 aa12.5□□□□□ -0.41
RTL6-201ENST00000341255 E9PLD3 99 aa12.5□□□□□ -0.41
RTL6-201ENST00000341255 PIFOQ8TCI5 191 aa12.5□□□□□ -0.41
RTL6-201ENST00000341255 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
RTL6-201ENST00000341255 Q8N7P7 452 aa12.5□□□□□ -0.41
RTL6-201ENST00000341255 K7EMT4 169 aa12.49□□□□□ -0.41
RTL6-201ENST00000341255 C19orf71A6NCJ1 209 aa12.49□□□□□ -0.41
RTL6-201ENST00000341255 C2orf70A6NJV1 201 aa12.49□□□□□ -0.41
RTL6-201ENST00000341255 CGB7P0DN87 165 aa12.49□□□□□ -0.41
RTL6-201ENST00000341255 C9orf47Q6ZRZ4 202 aa12.49□□□□□ -0.41
RTL6-201ENST00000341255 ZFP36P26651 326 aaKnown RBP12.49□□□□□ -0.41
RTL6-201ENST00000341255 ZNF503Q96F45 646 aa12.49□□□□□ -0.41
RTL6-201ENST00000341255 C1orf43Q9BWL3 253 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 COL4A3Q01955 1670 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 SONP18583 2426 aaKnown RBP12.48□□□□□ -0.41
RTL6-201ENST00000341255 K7EQD1 137 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 PRB1P04280 392 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 ATP6V0E2Q8NHE4 81 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 G3V4G9 280 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 Q8N1Y9 231 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 SMIM20Q8N5G0 67 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 IGHV4OR15-8A0A075B7B6 117 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 A0A087WW49 117 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 GYPEP15421 78 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 MRPL23Q16540 153 aaKnown RBP12.48□□□□□ -0.41
RTL6-201ENST00000341255 TECTAO75443 2155 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 ATP5G1P05496 136 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 DAZ2Q13117 558 aaKnown RBP12.48□□□□□ -0.41
RTL6-201ENST00000341255 DAZ4Q86SG3 579 aaKnown RBP12.48□□□□□ -0.41
RTL6-201ENST00000341255 DEFB105AQ8NG35 78 aa12.48□□□□□ -0.41
RTL6-201ENST00000341255 DAZ3Q9NR90 486 aaKnown RBP12.48□□□□□ -0.41
RTL6-201ENST00000341255 A0A0B4J2C4 111 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 IGKV3D-7A0A0C4DH55 119 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 C11orf86A6NJI1 115 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 FBXL19-AS1Q494R0 122 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 SPANXCQ9NY87 97 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 SPART-AS1P0CW21 52 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 HIVEP2P31629 2446 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 IGHV4-4A0A075B6R2 117 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 FAM236AA0A1B0GUQ0 79 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 FAM236BA0A1B0GV22 79 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 H0YGX0 51 aa12.47□□□□□ -0.41
RTL6-201ENST00000341255 GPHB5Q86YW7 130 aa12.46□□□□□ -0.41
RTL6-201ENST00000341255 TRBV6-1A0A0K0K1D8 114 aa12.46□□□□□ -0.41
RTL6-201ENST00000341255 DEFB1P60022 68 aa12.46□□□□□ -0.41
RTL6-201ENST00000341255 FREM1Q5H8C1 2179 aa12.46□□□□□ -0.41
RTL6-201ENST00000341255 LOXL1Q08397 574 aaPredicted RBP12.46□□□□□ -0.41
RTL6-201ENST00000341255 MSMPQ1L6U9 139 aa12.46□□□□□ -0.41
RTL6-201ENST00000341255 NRGNQ92686 78 aa12.46□□□□□ -0.41
RTL6-201ENST00000341255 Q9HAA7 133 aa12.46□□□□□ -0.41
RTL6-201ENST00000341255 IGHG2P01859 326 aa12.46□□□□□ -0.42
RTL6-201ENST00000341255 TIMM17AQ99595 171 aa12.46□□□□□ -0.42
RTL6-201ENST00000341255 P0C879 139 aa12.45□□□□□ -0.42
RTL6-201ENST00000341255 TMEM89A2RUT3 159 aa12.45□□□□□ -0.42
RTL6-201ENST00000341255 UBE2BP63146 152 aa12.45□□□□□ -0.42
RTL6-201ENST00000341255 NCKAP5O14513 1909 aa12.45□□□□□ -0.42
RTL6-201ENST00000341255 SPATA12Q7Z6I5 190 aa12.45□□□□□ -0.42
RTL6-201ENST00000341255 HIST2H2BCQ6DN03 193 aa12.45□□□□□ -0.42
RTL6-201ENST00000341255 ARHGAP21Q5T5U3 1957 aa12.45□□□□□ -0.42
RTL6-201ENST00000341255 A0A1B0GXF2 115 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 TMEM258P61165 79 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 COX7B2Q8TF08 81 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 NACAE9PAV3 2078 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 IGLV2-8P01709 118 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 CLEC2BQ92478 149 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 SIRPDQ9H106 197 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 IGLV10-54A0A075B6I4 117 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 IGKV1D-37A0A075B6S9 117 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 A0A1B0GX51 115 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 Q6ZPA2 131 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 PTH2Q96A98 100 aa12.44□□□□□ -0.42
RTL6-201ENST00000341255 TRBV10-2A0A0K0K1G8 114 aa12.43□□□□□ -0.42
RTL6-201ENST00000341255 LGALS9O00182 355 aa12.43□□□□□ -0.42
RTL6-201ENST00000341255 LINC00322Q6ZN03 302 aaPredicted RBP12.43□□□□□ -0.42
RTL6-201ENST00000341255 MED14OSP0DP75 135 aa12.43□□□□□ -0.42
RTL6-201ENST00000341255 GDF5OSQ5U4N7 250 aa12.43□□□□□ -0.42
RTL6-201ENST00000341255 WISP2O76076 250 aa12.42□□□□□ -0.42
RTL6-201ENST00000341255 CAMK2N2Q96S95 79 aa12.42□□□□□ -0.42
RTL6-201ENST00000341255 ATOX1O00244 68 aa12.42□□□□□ -0.42
RTL6-201ENST00000341255 ZNF295-AS1Q8N0V1 137 aa12.42□□□□□ -0.42
RTL6-201ENST00000341255 COX7A2LO14548 114 aa12.42□□□□□ -0.42
RTL6-201ENST00000341255 TNRC6AQ8NDV7 1962 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms