RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 TNP2Q05952 138 aa10.49□□□□□ -0.73
VAPA-201ENST00000340541 SH2D6Q7Z4S9 175 aa10.49□□□□□ -0.73
VAPA-201ENST00000340541 WFDC10BQ8IUB3 73 aa10.49□□□□□ -0.73
VAPA-201ENST00000340541 ZFP82Q8N141 532 aa10.49□□□□□ -0.73
VAPA-201ENST00000340541 OR10AG1Q8NH19 301 aa10.49□□□□□ -0.73
VAPA-201ENST00000340541 Q9UF83 564 aa10.49□□□□□ -0.73
VAPA-201ENST00000340541 RBFOX3A6NFN3 312 aa10.48□□□□□ -0.73
VAPA-201ENST00000340541 C16orf90A8MZG2 172 aa10.48□□□□□ -0.73
VAPA-201ENST00000340541 RHODO00212 210 aa10.48□□□□□ -0.73
VAPA-201ENST00000340541 OR5AL1P0C617 328 aa10.48□□□□□ -0.73
VAPA-201ENST00000340541 C14orf178Q8N769 122 aaPredicted RBP10.48□□□□□ -0.73
VAPA-201ENST00000340541 DNAH11Q96DT5 4516 aa10.48□□□□□ -0.73
VAPA-201ENST00000340541 RYR1P21817 5038 aa10.47□□□□□ -0.73
VAPA-201ENST00000340541 A0A087WWL8 130 aa10.47□□□□□ -0.73
VAPA-201ENST00000340541 BTF3P20290 206 aaKnown RBP10.47□□□□□ -0.73
VAPA-201ENST00000340541 TMEM250H0YL14 139 aa10.46□□□□□ -0.73
VAPA-201ENST00000340541 IGLC6P0CF74 106 aa10.46□□□□□ -0.73
VAPA-201ENST00000340541 GZMBP10144 247 aa10.46□□□□□ -0.73
VAPA-201ENST00000340541 FAM74A4Q5TZK3 123 aa10.46□□□□□ -0.73
VAPA-201ENST00000340541 DYNC1H1Q14204 4646 aaKnown RBP10.45□□□□□ -0.74
VAPA-201ENST00000340541 MUC21A0A0G2JKD1 596 aa10.45□□□□□ -0.74
VAPA-201ENST00000340541 MUC21A0A140T8X8 626 aa10.45□□□□□ -0.74
VAPA-201ENST00000340541 K7EN84 100 aa10.45□□□□□ -0.74
VAPA-201ENST00000340541 DNAH10OSP0CZ25 163 aa10.45□□□□□ -0.74
VAPA-201ENST00000340541 OR2D3Q8NGH3 330 aa10.45□□□□□ -0.74
VAPA-201ENST00000340541 KRTAP4-5Q9BYR2 181 aa10.45□□□□□ -0.74
VAPA-201ENST00000340541 GAGE12JA6NER3 117 aa10.44□□□□□ -0.74
VAPA-201ENST00000340541 LINC00315P59091 139 aa10.44□□□□□ -0.74
VAPA-201ENST00000340541 GAGE1Q13065 139 aa10.44□□□□□ -0.74
VAPA-201ENST00000340541 GAGE4Q13068 117 aa10.44□□□□□ -0.74
VAPA-201ENST00000340541 GAGE5Q13069 117 aa10.44□□□□□ -0.74
VAPA-201ENST00000340541 GAGE13Q4V321 117 aa10.44□□□□□ -0.74
VAPA-201ENST00000340541 TOR2AQ5JU69 321 aa10.44□□□□□ -0.74
VAPA-201ENST00000340541 ATP6V0E2Q8NHE4 81 aa10.44□□□□□ -0.74
VAPA-201ENST00000340541 OCC1Q8TAD7 63 aa10.44□□□□□ -0.74
VAPA-201ENST00000340541 DAZAP1Q96EP5 407 aaKnown RBP10.44□□□□□ -0.74
VAPA-201ENST00000340541 LY96Q9Y6Y9 160 aa10.44□□□□□ -0.74
VAPA-201ENST00000340541 P01737 135 aa10.43□□□□□ -0.74
VAPA-201ENST00000340541 RPS20P60866 119 aaKnown RBP10.43□□□□□ -0.74
VAPA-201ENST00000340541 Q6ZRN7 208 aaPredicted RBP10.43□□□□□ -0.74
VAPA-201ENST00000340541 NUDT10Q8NFP7 164 aa10.43□□□□□ -0.74
VAPA-201ENST00000340541 NUDT11Q96G61 164 aa10.43□□□□□ -0.74
VAPA-201ENST00000340541 FAM210AQ96ND0 272 aa10.43□□□□□ -0.74
VAPA-201ENST00000340541 GTSF1LQ9H1H1 148 aa10.43□□□□□ -0.74
VAPA-201ENST00000340541 BIN3Q9NQY0 253 aa10.43□□□□□ -0.74
VAPA-201ENST00000340541 KIF25-AS1Q9Y6Z4 181 aa10.43□□□□□ -0.74
VAPA-201ENST00000340541 NDUFS6O75380 124 aaKnown RBP10.42□□□□□ -0.74
VAPA-201ENST00000340541 LELP1Q5T871 98 aa10.42□□□□□ -0.74
VAPA-201ENST00000340541 SPANXN1Q5VSR9 72 aa10.42□□□□□ -0.74
VAPA-201ENST00000340541 TEX261Q6UWH6 196 aa10.42□□□□□ -0.74
VAPA-201ENST00000340541 FER1L6-AS1Q8NA97 138 aa10.42□□□□□ -0.74
VAPA-201ENST00000340541 TNFRSF18Q9Y5U5 241 aa10.42□□□□□ -0.74
VAPA-201ENST00000340541 SSTP61278 116 aa10.41□□□□□ -0.74
VAPA-201ENST00000340541 EIF5A2Q9GZV4 153 aaKnown RBP10.41□□□□□ -0.74
VAPA-201ENST00000340541 RNASE7Q9H1E1 156 aaKnown RBP10.41□□□□□ -0.74
VAPA-201ENST00000340541 MSRB1Q9NZV6 116 aa10.41□□□□□ -0.74
VAPA-201ENST00000340541 IGHV3-38A0A0C4DH36 116 aa10.4□□□□□ -0.74
VAPA-201ENST00000340541 TRBV10-1A0A0K0K1A3 114 aa10.4□□□□□ -0.74
VAPA-201ENST00000340541 K7EP13 123 aa10.4□□□□□ -0.74
VAPA-201ENST00000340541 SRP19P09132 144 aaKnown RBP10.4□□□□□ -0.74
VAPA-201ENST00000340541 RAB4BP61018 213 aa10.4□□□□□ -0.74
VAPA-201ENST00000340541 LINC01556Q5JQF7 62 aa10.4□□□□□ -0.74
VAPA-201ENST00000340541 MAPKAPK5-AS1Q8N8E1 139 aa10.4□□□□□ -0.74
VAPA-201ENST00000340541 TPPP3Q9BW30 176 aa10.4□□□□□ -0.74
VAPA-201ENST00000340541 TRAV9-2A0A087WT02 112 aa10.39□□□□□ -0.75
VAPA-201ENST00000340541 TRAV8-6A0A0B4J262 113 aa10.39□□□□□ -0.75
VAPA-201ENST00000340541 XKRY2A2RUG3 117 aa10.39□□□□□ -0.75
VAPA-201ENST00000340541 EVI2AP22794 236 aa10.39□□□□□ -0.75
VAPA-201ENST00000340541 ZNF56Q15929 161 aa10.39□□□□□ -0.75
VAPA-201ENST00000340541 OR10J3Q5JRS4 329 aa10.39□□□□□ -0.75
VAPA-201ENST00000340541 Q8N1X5 172 aa10.39□□□□□ -0.75
VAPA-201ENST00000340541 OR10G8Q8NGN5 311 aa10.39□□□□□ -0.75
VAPA-201ENST00000340541 RPP21Q9H633 154 aaKnown RBP10.39□□□□□ -0.75
VAPA-201ENST00000340541 F2Z2F3 143 aa10.38□□□□□ -0.75
VAPA-201ENST00000340541 CTRLP40313 264 aa10.38□□□□□ -0.75
VAPA-201ENST00000340541 CEBPGP53567 150 aa10.38□□□□□ -0.75
VAPA-201ENST00000340541 UBE2D3P61077 147 aa10.38□□□□□ -0.75
VAPA-201ENST00000340541 UBE2D2P62837 147 aa10.38□□□□□ -0.75
VAPA-201ENST00000340541 CACNG7P62955 275 aa10.38□□□□□ -0.75
VAPA-201ENST00000340541 LYZL1Q6UWQ5 148 aa10.38□□□□□ -0.75
VAPA-201ENST00000340541 SPATA12Q7Z6I5 190 aa10.38□□□□□ -0.75
VAPA-201ENST00000340541 AP1S3Q96PC3 154 aa10.38□□□□□ -0.75
VAPA-201ENST00000340541 FAM231DQ6ZW35 169 aa10.37□□□□□ -0.75
VAPA-201ENST00000340541 Q8N3U1 123 aa10.37□□□□□ -0.75
VAPA-201ENST00000340541 NEXN-AS1Q8NBZ9 246 aa10.37□□□□□ -0.75
VAPA-201ENST00000340541 SMIM7Q9BQ49 75 aa10.37□□□□□ -0.75
VAPA-201ENST00000340541 CNFNQ9BYD5 112 aa10.37□□□□□ -0.75
VAPA-201ENST00000340541 TRBV7-3A0A075B6L6 115 aa10.36□□□□□ -0.75
VAPA-201ENST00000340541 C9JQL5 133 aa10.36□□□□□ -0.75
VAPA-201ENST00000340541 RPL36AP83881 106 aaKnown RBP10.36□□□□□ -0.75
VAPA-201ENST00000340541 LINC01551Q86U37 167 aa10.36□□□□□ -0.75
VAPA-201ENST00000340541 C10orf126Q8N4M7 172 aa10.36□□□□□ -0.75
VAPA-201ENST00000340541 GTSF1Q8WW33 167 aa10.36□□□□□ -0.75
VAPA-201ENST00000340541 RPL36ALQ969Q0 106 aaKnown RBP10.36□□□□□ -0.75
VAPA-201ENST00000340541 ABCA13Q86UQ4 5058 aa10.36□□□□□ -0.75
VAPA-201ENST00000340541 HSPG2P98160 4391 aa10.35□□□□□ -0.75
VAPA-201ENST00000340541 A0A087WWC5 75 aa10.35□□□□□ -0.75
VAPA-201ENST00000340541 IGHV3-30P01768 117 aa10.35□□□□□ -0.75
VAPA-201ENST00000340541 IGHV3-33P01772 117 aa10.35□□□□□ -0.75
VAPA-201ENST00000340541 IGHV3-30-3P0DP02 117 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms