RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 SMIM6P0DI80 62 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 IGLL1P15814 213 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 TMEM97Q5BJF2 176 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 HIST2H2BDQ6DRA6 164 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 NRACQ8N912 160 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 TMSB15BA0A087X1C1 80 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 CKS2P33552 79 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 RRN3P1Q2M238 152 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 NDUFA6P56556 154 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 RHOHQ15669 191 aa5.19□□□□□ -1.58
NUP43-201ENST00000340413 CRYGDP07320 174 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 DEFB1P60022 68 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 SMAGPQ0VAQ4 97 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 ORMDL2Q53FV1 153 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 TRAV12-2A0A075B6T6 113 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 IGHV3-53P01767 116 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 LINC00614P0C842 121 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 CRYBA4P53673 196 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 BAGE3Q86Y29 109 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 IGLV2-18A0A075B6J9 118 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 PLAC8L1A1L4L8 177 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 TNFRSF6BO95407 300 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 S100A2P29034 98 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 MUC21Q5SSG8 566 aa5.18□□□□□ -1.58
NUP43-201ENST00000340413 TIMM8BQ9Y5J9 83 aaPredicted RBP5.18□□□□□ -1.58
NUP43-201ENST00000340413 D6R8Y8 96 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 SNRPEP62304 92 aaKnown RBP5.17□□□□□ -1.58
NUP43-201ENST00000340413 SPATA12Q7Z6I5 190 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 TMEM208Q9BTX3 173 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 TRBV27A0A0K0K1C4 114 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 MDFICQ9P1T7 246 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 HSPB8Q9UJY1 196 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 X6R8D5 127 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 STAB1Q9NY15 2570 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 TRBV6-4A0A1B0GX49 114 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 ZNF876PQ49A33 203 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 PDZD11Q5EBL8 140 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 CFAP126Q5VTH2 177 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 FA2HQ7L5A8 372 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 NIT1Q86X76 327 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 SMIM2Q9BVW6 85 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 TPPP3Q9BW30 176 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 NIT2Q9NQR4 276 aa5.17□□□□□ -1.58
NUP43-201ENST00000340413 H3BNG1 76 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 H7C423 109 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 VCYO14598 125 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 POLR2KP53803 58 aaKnown RBP5.16□□□□□ -1.58
NUP43-201ENST00000340413 LINC00310P59036 64 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 SH2D6Q7Z4S9 175 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 XCL2Q9UBD3 114 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 M0QY20 66 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 IGKV3-20P01619 116 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 FRMD6-AS1P0C7T7 363 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 ZNF124Q15973 351 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 HIST1H2BLQ99880 126 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 ST20Q9HBF5 79 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 AP5S1Q9NUS5 200 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 NOTCH1P46531 2555 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 SERF1AO75920 110 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 IGHV4-30-4P0DP06 118 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 FCER1GP30273 86 aa5.16□□□□□ -1.58
NUP43-201ENST00000340413 SUMO2P61956 95 aaKnown RBP5.16□□□□□ -1.58
NUP43-201ENST00000340413 TRAV26-1A0A087WT03 109 aa5.15□□□□□ -1.58
NUP43-201ENST00000340413 LINC00694P0DN24 101 aa5.15□□□□□ -1.58
NUP43-201ENST00000340413 EVI2AP22794 236 aa5.15□□□□□ -1.58
NUP43-201ENST00000340413 SUMO4Q6EEV6 95 aa5.15□□□□□ -1.58
NUP43-201ENST00000340413 HSBP1O75506 76 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 PKIAP61925 76 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 GTSF1LQ9H1H1 148 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 MSRB1Q9NZV6 116 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 C20orf202A1L168 122 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 ATP5LO75964 103 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 NPYP01303 97 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 HBDP02042 147 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 GATA1P15976 413 aaPredicted RBP5.15□□□□□ -1.59
NUP43-201ENST00000340413 AZU1P20160 251 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 TIRAPP58753 221 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 KRTAP10-11P60412 298 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 ODF1Q14990 250 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 PET117Q6UWS5 81 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 PRSS3P2Q8NHM4 247 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 URB1-AS1Q96HZ7 61 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 TIMM21Q9BVV7 248 aa5.15□□□□□ -1.59
NUP43-201ENST00000340413 DNAH3Q8TD57 4116 aa5.14□□□□□ -1.59
NUP43-201ENST00000340413 LAGE3Q14657 143 aa5.14□□□□□ -1.59
NUP43-201ENST00000340413 JOSD1Q15040 202 aaPredicted RBP5.14□□□□□ -1.59
NUP43-201ENST00000340413 Q6ZQT7 251 aa5.14□□□□□ -1.59
NUP43-201ENST00000340413 RPL35AP18077 110 aaKnown RBP5.14□□□□□ -1.59
NUP43-201ENST00000340413 FXYD7P58549 80 aa5.14□□□□□ -1.59
NUP43-201ENST00000340413 DAZ4Q86SG3 579 aaKnown RBP5.14□□□□□ -1.59
NUP43-201ENST00000340413 C14orf178Q8N769 122 aaPredicted RBP5.14□□□□□ -1.59
NUP43-201ENST00000340413 TMEM141Q96I45 108 aa5.14□□□□□ -1.59
NUP43-201ENST00000340413 DAZ3Q9NR90 486 aaKnown RBP5.14□□□□□ -1.59
NUP43-201ENST00000340413 IFITM10A6NMD0 228 aa5.14□□□□□ -1.59
NUP43-201ENST00000340413 Q8NAQ8 132 aa5.14□□□□□ -1.59
NUP43-201ENST00000340413 NBEAL1Q6ZS30 2694 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 I3L3M4 83 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 OR4C5Q8NGB2 326 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 PYGO1Q9Y3Y4 419 aa5.13□□□□□ -1.59
NUP43-201ENST00000340413 ZFHX3Q15911 3703 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms