RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 STHQ8IWL8 128 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 C20orf144Q9BQM9 153 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 PPBPP02775 128 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 P0DMU3 169 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 FAM231AP0DMU4 169 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 FAM231CP0DMU5 169 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 GATD1Q8NB37 220 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 STAB1Q9NY15 2570 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 LY6G6DO95868 133 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 FCER1GP30273 86 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 KLK9Q2XQG4 91 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 C4orf3Q8WVX3 66 aa7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 NXT2Q9NPJ8 142 aaKnown RBP7.56□□□□□ -1.2
RBFOX1-202ENST00000340209 PROK1P58294 105 aa7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 SLC25A34Q6PIV7 304 aa7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 SCGB3A1Q96QR1 104 aa7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 MRPL16Q9NX20 251 aaKnown RBP7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 TRAV8-6A0A0B4J262 113 aa7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 LAGE3Q14657 143 aa7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 DNLZQ5SXM8 178 aa7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 PET117Q6UWS5 81 aa7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 DUSP14O95147 198 aaKnown RBP7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 LAMTOR2Q9Y2Q5 125 aa7.55□□□□□ -1.2
RBFOX1-202ENST00000340209 CD5LO43866 347 aa7.54□□□□□ -1.2
RBFOX1-202ENST00000340209 MPV17L2Q567V2 206 aa7.54□□□□□ -1.2
RBFOX1-202ENST00000340209 MAP6D1Q9H9H5 199 aa7.54□□□□□ -1.2
RBFOX1-202ENST00000340209 LENEPQ9Y5L5 61 aa7.54□□□□□ -1.2
RBFOX1-202ENST00000340209 NAA38Q9BRA0 125 aaKnown RBP7.54□□□□□ -1.2
RBFOX1-202ENST00000340209 IGHV3-38A0A0C4DH36 116 aa7.54□□□□□ -1.2
RBFOX1-202ENST00000340209 SUMO4Q6EEV6 95 aa7.54□□□□□ -1.2
RBFOX1-202ENST00000340209 FOXI2Q6ZQN5 318 aa7.54□□□□□ -1.2
RBFOX1-202ENST00000340209 RASL10AQ92737 203 aa7.54□□□□□ -1.2
RBFOX1-202ENST00000340209 SMIM2Q9BVW6 85 aa7.54□□□□□ -1.2
RBFOX1-202ENST00000340209 K7EMI3 77 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 RBMY1A1P0DJD3 496 aaKnown RBP7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 RBMY1CP0DJD4 496 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 RPL39P62891 51 aaKnown RBP7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 RBMY1FQ15415 496 aaKnown RBP7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 COX8CQ7Z4L0 72 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 SYT8Q8NBV8 401 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 PHLDA1Q8WV24 401 aaPredicted RBP7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 OR11H12B2RN74 326 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 DEFB114Q30KQ6 69 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 Q8N8P6 123 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 ST20Q9HBF5 79 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 KLLNB2CW77 178 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 KRTAP1-1Q07627 177 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 RNASE13Q5GAN3 156 aaKnown RBP7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 PCP2Q8IVA1 136 aa7.53□□□□□ -1.2
RBFOX1-202ENST00000340209 CIDEAO60543 219 aa7.52□□□□□ -1.2
RBFOX1-202ENST00000340209 NRACQ8N912 160 aa7.52□□□□□ -1.2
RBFOX1-202ENST00000340209 MRPL35Q9NZE8 188 aaKnown RBP7.52□□□□□ -1.2
RBFOX1-202ENST00000340209 TMEM89A2RUT3 159 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 RBMY1BA6NDE4 496 aaKnown RBP7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 RBMY1EA6NEQ0 496 aaKnown RBP7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 RBMY1DP0C7P1 496 aaKnown RBP7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 JMJD8Q96S16 334 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 U3KQK5 164 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 IGHV3-64A0A075B6Q5 118 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 SDHAF1A6NFY7 115 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 H3BMM0 161 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 TEX29Q8N6K0 151 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 AKAP9Q99996 3911 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 TRGV1A0A0A0MS02 117 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 LGALS9O00182 355 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 SCGB2A2Q13296 93 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 NOTCH1P46531 2555 aa7.52□□□□□ -1.21
RBFOX1-202ENST00000340209 C2orf66Q6UXQ4 117 aa7.51□□□□□ -1.21
RBFOX1-202ENST00000340209 RAB37Q96AX2 223 aa7.51□□□□□ -1.21
RBFOX1-202ENST00000340209 OPRPNQ99935 248 aaPredicted RBP7.51□□□□□ -1.21
RBFOX1-202ENST00000340209 CNFNQ9BYD5 112 aa7.51□□□□□ -1.21
RBFOX1-202ENST00000340209 TP53TG1Q9Y2A0 90 aa7.51□□□□□ -1.21
RBFOX1-202ENST00000340209 TSSC4Q9Y5U2 329 aaPredicted RBP7.51□□□□□ -1.21
RBFOX1-202ENST00000340209 BRI3O95415 125 aa7.51□□□□□ -1.21
RBFOX1-202ENST00000340209 SAMD13Q5VXD3 122 aa7.51□□□□□ -1.21
RBFOX1-202ENST00000340209 KIR2DL4Q99706 377 aa7.51□□□□□ -1.21
RBFOX1-202ENST00000340209 LINC01545Q5VT33 79 aa7.51□□□□□ -1.21
RBFOX1-202ENST00000340209 ODF3L2Q3SX64 289 aa7.5□□□□□ -1.21
RBFOX1-202ENST00000340209 MRAP2Q96G30 205 aa7.5□□□□□ -1.21
RBFOX1-202ENST00000340209 Q9UF83 564 aa7.5□□□□□ -1.21
RBFOX1-202ENST00000340209 HLA-DRB4P13762 266 aa7.49□□□□□ -1.21
RBFOX1-202ENST00000340209 ZNF580Q9UK33 172 aa7.49□□□□□ -1.21
RBFOX1-202ENST00000340209 HLA-DRB4X5D2U9 266 aa7.49□□□□□ -1.21
RBFOX1-202ENST00000340209 COL6A5A8TX70 2615 aa7.49□□□□□ -1.21
RBFOX1-202ENST00000340209 IGKCP01834 107 aa7.49□□□□□ -1.21
RBFOX1-202ENST00000340209 AZU1P20160 251 aa7.49□□□□□ -1.21
RBFOX1-202ENST00000340209 TRGV11A0A075B6L2 103 aa7.49□□□□□ -1.21
RBFOX1-202ENST00000340209 INSP01308 110 aa7.49□□□□□ -1.21
RBFOX1-202ENST00000340209 COL5A1-AS1Q5SY13 56 aa7.49□□□□□ -1.21
RBFOX1-202ENST00000340209 VPS25Q9BRG1 176 aa7.49□□□□□ -1.21
RBFOX1-202ENST00000340209 GCSHP23434 173 aa7.48□□□□□ -1.21
RBFOX1-202ENST00000340209 CEMP1Q6PRD7 247 aaPredicted RBP7.48□□□□□ -1.21
RBFOX1-202ENST00000340209 DPM2O94777 84 aa7.48□□□□□ -1.21
RBFOX1-202ENST00000340209 NUTF2P61970 127 aaKnown RBP7.48□□□□□ -1.21
RBFOX1-202ENST00000340209 VAMP3Q15836 100 aa7.48□□□□□ -1.21
RBFOX1-202ENST00000340209 FAM19A4Q96LR4 140 aa7.48□□□□□ -1.21
RBFOX1-202ENST00000340209 C2orf88Q9BSF0 95 aa7.48□□□□□ -1.21
RBFOX1-202ENST00000340209 IGKV2D-26A0A0A0MRZ7 120 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms