RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TCTAP57738 103 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 FAM74A4Q5TZK3 123 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 SAMD13Q5VXD3 122 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 KIR2DL5AQ8N109 375 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 TMEM160Q9NX00 188 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 HLA-DRB4X5D2U9 266 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 IGHV1OR15-1A0A075B7D0 117 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 LEPP41159 167 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 CACNG7P62955 275 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 SPATA45Q537H7 98 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 SMIM15Q7Z3B0 74 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 NDUFAF3Q9BU61 184 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 MAP1LC3AQ9H492 121 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 XCL2Q9UBD3 114 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 KIF25-AS1Q9Y6Z4 181 aa5.43□□□□□ -1.54
SRFBP1-201ENST00000339397 PPBPP02775 128 aa5.42□□□□□ -1.54
SRFBP1-201ENST00000339397 IGLL1P15814 213 aa5.42□□□□□ -1.54
SRFBP1-201ENST00000339397 Q9UF83 564 aa5.42□□□□□ -1.54
SRFBP1-201ENST00000339397 DUSP14O95147 198 aaKnown RBP5.42□□□□□ -1.54
SRFBP1-201ENST00000339397 ZNF705AQ6ZN79 300 aaPredicted RBP5.42□□□□□ -1.54
SRFBP1-201ENST00000339397 IGHV3OR16-12A0A075B7B8 117 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 IGHV3-73A0A0B4J1V6 119 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 CBY3A6NI87 242 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 TMEM158Q8WZ71 300 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 C9orf85Q96MD7 179 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 ODF3Q96PU9 254 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 SPAG8Q99932 426 aaPredicted RBP5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 MAP1LC3CQ9BXW4 147 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 DPH3P1Q9H4G8 78 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 AZU1P20160 251 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 TSPOP30536 169 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 ZNF876PQ49A33 203 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 F5H697 171 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 NXPH4O95158 308 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 CRYGDP07320 174 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 HSPB8Q9UJY1 196 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 ANK2Q01484 3957 aa5.41□□□□□ -1.54
SRFBP1-201ENST00000339397 NDUFA7O95182 113 aa5.4□□□□□ -1.54
SRFBP1-201ENST00000339397 HBDP02042 147 aa5.4□□□□□ -1.54
SRFBP1-201ENST00000339397 SCGB2A2Q13296 93 aa5.4□□□□□ -1.54
SRFBP1-201ENST00000339397 Q8N8P6 123 aa5.4□□□□□ -1.54
SRFBP1-201ENST00000339397 AP1S3Q96PC3 154 aa5.4□□□□□ -1.54
SRFBP1-201ENST00000339397 C20orf144Q9BQM9 153 aa5.4□□□□□ -1.54
SRFBP1-201ENST00000339397 DKK2Q9UBU2 259 aa5.4□□□□□ -1.54
SRFBP1-201ENST00000339397 A8MTW9 85 aa5.4□□□□□ -1.55
SRFBP1-201ENST00000339397 P0DMU3 169 aa5.4□□□□□ -1.55
SRFBP1-201ENST00000339397 FAM231AP0DMU4 169 aa5.4□□□□□ -1.55
SRFBP1-201ENST00000339397 FAM231CP0DMU5 169 aa5.4□□□□□ -1.55
SRFBP1-201ENST00000339397 SUMO2P61956 95 aaKnown RBP5.4□□□□□ -1.55
SRFBP1-201ENST00000339397 SUMO4Q6EEV6 95 aa5.4□□□□□ -1.55
SRFBP1-201ENST00000339397 LINC01587Q99440 93 aa5.4□□□□□ -1.55
SRFBP1-201ENST00000339397 TRAV9-2A0A087WT02 112 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 IGLC3P0DOY3 106 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 MED14OSP0DP75 135 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 LINC01545Q5VT33 79 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 STPG4Q8N801 248 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 IFI27L1Q96BM0 104 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 NXT2Q9NPJ8 142 aaKnown RBP5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 TRAV2A0A0B4J234 112 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 LINC01546A6NGU7 62 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 OR11H12B2RN74 326 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 IGLV1-51P01701 117 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 GIG44P09565 113 aaPredicted RBP5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 SMIM17P0DL12 118 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 RPL35AP18077 110 aaKnown RBP5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 FCER1GP30273 86 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 NUTF2P61970 127 aaKnown RBP5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 MORN3Q6PF18 240 aaPredicted RBP5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 STHQ8IWL8 128 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 MRAP2Q96G30 205 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 MIEN1Q9BRT3 115 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 SMIM2Q9BVW6 85 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 SNHG12Q9BXW3 62 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 CSTL1Q9H114 145 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 C19orf73Q9NVV2 129 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 LAMTOR2Q9Y2Q5 125 aa5.39□□□□□ -1.55
SRFBP1-201ENST00000339397 Q6ZSN1 163 aa5.38□□□□□ -1.55
SRFBP1-201ENST00000339397 C1orf158Q8N1D5 194 aa5.38□□□□□ -1.55
SRFBP1-201ENST00000339397 COL6A5A8TX70 2615 aa5.38□□□□□ -1.55
SRFBP1-201ENST00000339397 CRLF1O75462 422 aa5.38□□□□□ -1.55
SRFBP1-201ENST00000339397 LAGE3Q14657 143 aa5.38□□□□□ -1.55
SRFBP1-201ENST00000339397 PET117Q6UWS5 81 aa5.38□□□□□ -1.55
SRFBP1-201ENST00000339397 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.38□□□□□ -1.55
SRFBP1-201ENST00000339397 JMJD8Q96S16 334 aa5.38□□□□□ -1.55
SRFBP1-201ENST00000339397 M0R143 59 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 NUDT3O95989 172 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 ZNF56Q15929 161 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 TRPT1Q86TN4 253 aaKnown RBP5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 C11orf72Q8NBR9 251 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 TRAV25A0A0B4J276 109 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 M0QY20 66 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 PRSS1P07477 247 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 ZC2HC1BQ5TFG8 222 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 POM121L12Q8N7R1 296 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 MRPL16Q9NX20 251 aaKnown RBP5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 RPL39P62891 51 aaKnown RBP5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 ANKRD39Q53RE8 183 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 Q6ZN92 141 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 DEFB125Q8N687 156 aa5.37□□□□□ -1.55
SRFBP1-201ENST00000339397 LINC00482Q8N8I6 264 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms