RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 TRAV12-3A0A0B4J271 114 aa9.63□□□□□ -0.87
CDK5RAP1-201ENST00000339269 TAX1BP3O14907 124 aa9.63□□□□□ -0.87
CDK5RAP1-201ENST00000339269 SUMO2P61956 95 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP1-201ENST00000339269 AMTNQ6UX39 209 aa9.63□□□□□ -0.87
CDK5RAP1-201ENST00000339269 FN1P02751 2386 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP1-201ENST00000339269 AGRNO00468 2067 aa9.62□□□□□ -0.87
CDK5RAP1-201ENST00000339269 CBY3A6NI87 242 aa9.62□□□□□ -0.87
CDK5RAP1-201ENST00000339269 DEFB136Q30KP8 78 aa9.62□□□□□ -0.87
CDK5RAP1-201ENST00000339269 C9orf85Q96MD7 179 aa9.62□□□□□ -0.87
CDK5RAP1-201ENST00000339269 AP1S3Q96PC3 154 aa9.62□□□□□ -0.87
CDK5RAP1-201ENST00000339269 C20orf78Q9BR46 151 aa9.62□□□□□ -0.87
CDK5RAP1-201ENST00000339269 TRAV12-2A0A075B6T6 113 aa9.62□□□□□ -0.87
CDK5RAP1-201ENST00000339269 IGHV3-16A0A0C4DH30 117 aa9.62□□□□□ -0.87
CDK5RAP1-201ENST00000339269 SLURP1P55000 103 aa9.62□□□□□ -0.87
CDK5RAP1-201ENST00000339269 HIST2H2BDQ6DRA6 164 aa9.62□□□□□ -0.87
CDK5RAP1-201ENST00000339269 INAFM1C9JVW0 142 aa9.61□□□□□ -0.87
CDK5RAP1-201ENST00000339269 IGKV3-20P01619 116 aa9.61□□□□□ -0.87
CDK5RAP1-201ENST00000339269 MGPP08493 103 aa9.61□□□□□ -0.87
CDK5RAP1-201ENST00000339269 ATP5LO75964 103 aa9.6□□□□□ -0.87
CDK5RAP1-201ENST00000339269 RBMY1A1P0DJD3 496 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP1-201ENST00000339269 RBMY1CP0DJD4 496 aa9.6□□□□□ -0.87
CDK5RAP1-201ENST00000339269 RBMY1FQ15415 496 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP1-201ENST00000339269 C12orf54Q6X4T0 127 aa9.6□□□□□ -0.87
CDK5RAP1-201ENST00000339269 MRPL35Q9NZE8 188 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP1-201ENST00000339269 MDFICQ9P1T7 246 aa9.6□□□□□ -0.87
CDK5RAP1-201ENST00000339269 SORL1Q92673 2214 aa9.6□□□□□ -0.87
CDK5RAP1-201ENST00000339269 IGKCP01834 107 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 PRSS1P07477 247 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 SNRPD3P62318 126 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 SPINK13Q1W4C9 94 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 FAM159AQ6UWV7 190 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 TOMM6Q96B49 74 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 TTTY13Q9BZ97 58 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 A8MTW9 85 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 CCL25O15444 150 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 CD7P09564 240 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 SUMO4Q6EEV6 95 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 NEGR1Q7Z3B1 354 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 NF1P21359 2839 aa9.59□□□□□ -0.87
CDK5RAP1-201ENST00000339269 CUBNO60494 3623 aa9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 A0A087WX48 190 aa9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 RBMY1BA6NDE4 496 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 RBMY1EA6NEQ0 496 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 DPM2O94777 84 aa9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 RBMY1DP0C7P1 496 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 PTTG1IPP53801 180 aa9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 FOXI2Q6ZQN5 318 aa9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 Q8N1Y9 231 aa9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 DUX3Q96PT4 197 aa9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 C2CD3Q4AC94 2353 aa9.58□□□□□ -0.88
CDK5RAP1-201ENST00000339269 A0A087WWL8 130 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 NMUP48645 174 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 RPL32P62910 135 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 TMEM97Q5BJF2 176 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 MORN3Q6PF18 240 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 SIVA1O15304 175 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 POLR2KP53803 58 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 ORMDL2Q53FV1 153 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 ERASQ7Z444 233 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 GTSCR1Q86UQ5 136 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 OR9G4Q8NGQ1 327 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 C4orf3Q8WVX3 66 aa9.57□□□□□ -0.88
CDK5RAP1-201ENST00000339269 IGHV1OR15-1A0A075B7D0 117 aa9.56□□□□□ -0.88
CDK5RAP1-201ENST00000339269 TRAV12-1A0A0B4J245 112 aa9.56□□□□□ -0.88
CDK5RAP1-201ENST00000339269 K7EMI3 77 aa9.56□□□□□ -0.88
CDK5RAP1-201ENST00000339269 CRYGDP07320 174 aa9.56□□□□□ -0.88
CDK5RAP1-201ENST00000339269 RNF151Q2KHN1 245 aa9.56□□□□□ -0.88
CDK5RAP1-201ENST00000339269 Q6ZSV7 163 aa9.56□□□□□ -0.88
CDK5RAP1-201ENST00000339269 NEXN-AS1Q8NBZ9 246 aa9.56□□□□□ -0.88
CDK5RAP1-201ENST00000339269 LINC01619G3V211 115 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 ZC2HC1BQ5TFG8 222 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 TMEM160Q9NX00 188 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 JMJD1CQ15652 2540 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 DUSP14O95147 198 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 TSHBP01222 138 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 C2orf66Q6UXQ4 117 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 TMEM61Q8N0U2 210 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 TMEM86BQ8N661 226 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 BAALCQ8WXS3 180 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 DLX4Q92988 240 aaPredicted RBP9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 ESM1Q9NQ30 184 aa9.55□□□□□ -0.88
CDK5RAP1-201ENST00000339269 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP1-201ENST00000339269 CRLF1O75462 422 aa9.54□□□□□ -0.88
CDK5RAP1-201ENST00000339269 HLA-DRB4P13762 266 aa9.54□□□□□ -0.88
CDK5RAP1-201ENST00000339269 HSD52Q0P140 79 aa9.54□□□□□ -0.88
CDK5RAP1-201ENST00000339269 UBE2V1Q13404 147 aa9.54□□□□□ -0.88
CDK5RAP1-201ENST00000339269 MAPKAPK5-AS1Q8N8E1 139 aa9.54□□□□□ -0.88
CDK5RAP1-201ENST00000339269 SCGB3A1Q96QR1 104 aa9.54□□□□□ -0.88
CDK5RAP1-201ENST00000339269 CITED2Q99967 270 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP1-201ENST00000339269 HLA-DRB4X5D2U9 266 aa9.54□□□□□ -0.88
CDK5RAP1-201ENST00000339269 TRBV6-5A0A0K0K1A5 114 aa9.53□□□□□ -0.88
CDK5RAP1-201ENST00000339269 DNAJC9-AS1A6NH13 148 aa9.53□□□□□ -0.88
CDK5RAP1-201ENST00000339269 H3BMM0 161 aa9.53□□□□□ -0.88
CDK5RAP1-201ENST00000339269 DEFB131AP59861 70 aa9.53□□□□□ -0.88
CDK5RAP1-201ENST00000339269 SEC11AP67812 179 aa9.53□□□□□ -0.88
CDK5RAP1-201ENST00000339269 TRAV2A0A0B4J234 112 aa9.53□□□□□ -0.88
CDK5RAP1-201ENST00000339269 F8VRH5 84 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms