RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 RHOHQ15669 191 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 TMEM61Q8N0U2 210 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 OR10AG1Q8NH19 301 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 LINC00527Q9UJ94 153 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 PRKDCP78527 4128 aaKnown RBP3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 NACAE9PAV3 2078 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 FBN1P35555 2871 aaKnown RBP3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 M0QY20 66 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 FGF6P10767 208 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 SYNJ2BPP57105 145 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 C1orf158Q8N1D5 194 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 NAGKQ9UJ70 344 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 CSDC2Q9Y534 153 aaKnown RBP3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 CBY3A6NI87 242 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 SIVA1O15304 175 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 SNCGO76070 127 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 EVI2AP22794 236 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 SMIM9A6NGZ8 99 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 C3orf79P0CE67 100 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 KRTAP24-1Q3LI83 254 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 MAPK1IP1LQ8NDC0 245 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 TIMM17AQ99595 171 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 GTSF1LQ9H1H1 148 aa3.88□□□□□ -1.79
PRPF4B-201ENST00000337659 IGIPA6NJ69 53 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 PLXNB1O43157 2135 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 TNFRSF6BO95407 300 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 NPYP01303 97 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 S100A4P26447 101 aaKnown RBP3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 MRPL54Q6P161 138 aaKnown RBP3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 Q8N1Y9 231 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 ST20Q9HBF5 79 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 MUC4Q99102 2169 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 SYS1-DBNDD2H3BUS1 97 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 IGHV3-11P01762 117 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 CD300EQ496F6 205 aaPredicted RBP3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 DGAT2L7PQ6IED9 249 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 Q6ZQT7 251 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 OR10D4PQ8NGN7 298 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 SMIM2Q9BVW6 85 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 H7C423 109 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 FABP4P15090 132 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 TFPI2P48307 235 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 MRPS36P82909 103 aaKnown RBP3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 PRELID3AQ96N28 172 aa3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 MRPS16Q9Y3D3 137 aaKnown RBP3.87□□□□□ -1.79
PRPF4B-201ENST00000337659 IGLV5-45A0A087WSX0 123 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 D6R8Y8 96 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 DEFB121Q5J5C9 76 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 IGFL4Q6B9Z1 124 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 KLHL30-AS1Q8NEE0 82 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 DYNLRB2Q8TF09 96 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 MCRIP2Q9BUT9 160 aaKnown RBP3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 HSPB8Q9UJY1 196 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 TP53TG1Q9Y2A0 90 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 PF4P02776 101 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 NFE4Q86UQ8 179 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 NEXN-AS1Q8NBZ9 246 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 AMELXQ99217 191 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 C2orf88Q9BSF0 95 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 YAE1D1Q9NRH1 226 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 HHLA3Q9XRX5 114 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 HUWE1Q7Z6Z7 4374 aaKnown RBP3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 SETD2Q9BYW2 2564 aaPredicted RBP3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 GRIFINA4D1Z8 144 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 A8MWV9 139 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 INAFM1C9JVW0 142 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 M0R2P5 195 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 IGHV3-53P01767 116 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 TMEM263Q8WUH6 116 aaKnown RBP3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 TRBV10-1A0A0K0K1A3 114 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 RHODO00212 210 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 HBDP02042 147 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 TIRAPP58753 221 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 PMCHL2Q9BQD1 86 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 MSRB1Q9NZV6 116 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 HIGD1BQ9P298 99 aa3.86□□□□□ -1.79
PRPF4B-201ENST00000337659 CD33P20138 364 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 TMEM141Q96I45 108 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 TMEM70Q9BUB7 260 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 ATRQ13535 2644 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 CSMD3Q7Z407 3707 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 TRAV9-2A0A087WT02 112 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 TRAV26-1A0A087WT03 109 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 ORMDL2Q53FV1 153 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 C9orf66Q5T8R8 295 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 MIEN1Q9BRT3 115 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 MAP1LC3AQ9H492 121 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 MDFICQ9P1T7 246 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 TRAV4A0A0B4J268 109 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 TSHBP01222 138 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 CFAP126Q5VTH2 177 aa3.85□□□□□ -1.79
PRPF4B-201ENST00000337659 HSBP1L1C9JCN9 74 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 F5H697 171 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 ZNF207O43670 478 aaKnown RBP3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 ATP5LO75964 103 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 INSP01308 110 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 IGLC3P0DOY3 106 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 LINC01561Q8N1V8 128 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 C16orf74Q96GX8 76 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 AP5S1Q9NUS5 200 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms