RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 HIST1H2BAQ96A08 127 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 URGCP-MRPS24S4R325 110 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 ARL2-SNX15V9GYD0 113 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 IGKV3D-20A0A0C4DH25 116 aa7.13□□□□□ -1.27
CAPN3-202ENST00000337571 A0A0D9SG52 128 aa7.13□□□□□ -1.27
CAPN3-202ENST00000337571 PEX7O00628 323 aa7.13□□□□□ -1.27
CAPN3-202ENST00000337571 UBE2G1P62253 170 aa7.13□□□□□ -1.27
CAPN3-202ENST00000337571 TMEM70Q9BUB7 260 aa7.13□□□□□ -1.27
CAPN3-202ENST00000337571 PARLQ9H300 379 aa7.13□□□□□ -1.27
CAPN3-202ENST00000337571 IL36BQ9NZH7 164 aa7.13□□□□□ -1.27
CAPN3-202ENST00000337571 ZFP30Q9Y2G7 519 aa7.13□□□□□ -1.27
CAPN3-202ENST00000337571 RHODO00212 210 aa7.12□□□□□ -1.27
CAPN3-202ENST00000337571 BCL2L11O43521 198 aa7.12□□□□□ -1.27
CAPN3-202ENST00000337571 TEX261Q6UWH6 196 aa7.12□□□□□ -1.27
CAPN3-202ENST00000337571 Q6ZSN1 163 aa7.12□□□□□ -1.27
CAPN3-202ENST00000337571 STOML3Q8TAV4 291 aa7.12□□□□□ -1.27
CAPN3-202ENST00000337571 PHLDA3Q9Y5J5 127 aa7.12□□□□□ -1.27
CAPN3-202ENST00000337571 COX11Q9Y6N1 276 aa7.12□□□□□ -1.27
CAPN3-202ENST00000337571 SRRM2Q9UQ35 2752 aaKnown RBP7.11□□□□□ -1.27
CAPN3-202ENST00000337571 FAM74A7A6NL05 159 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 KRBOX1C9JBD0 128 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 H3BVH4 76 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 M0R036 132 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 ARMS2P0C7Q2 107 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 SEC11BP0C7V7 166 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 ZNF726P1Q15940 193 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 FAM162BQ5T6X4 162 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 FAM74A4Q5TZK3 123 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 KCNIP4Q6PIL6 250 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 RMI2Q96E14 147 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 FMC1Q96HJ9 113 aa7.11□□□□□ -1.27
CAPN3-202ENST00000337571 GRIFINA4D1Z8 144 aa7.1□□□□□ -1.27
CAPN3-202ENST00000337571 MAP1LC3B2A6NCE7 125 aa7.1□□□□□ -1.27
CAPN3-202ENST00000337571 TPT1P13693 172 aaKnown RBP7.1□□□□□ -1.27
CAPN3-202ENST00000337571 CST9LP1Q5W188 147 aa7.1□□□□□ -1.27
CAPN3-202ENST00000337571 DAZ4Q86SG3 579 aaKnown RBP7.1□□□□□ -1.27
CAPN3-202ENST00000337571 Q86TA4 180 aa7.1□□□□□ -1.27
CAPN3-202ENST00000337571 SLC51BQ86UW2 128 aa7.1□□□□□ -1.27
CAPN3-202ENST00000337571 ZC2HC1AQ96GY0 325 aa7.1□□□□□ -1.27
CAPN3-202ENST00000337571 SAMD10Q9BYL1 202 aa7.1□□□□□ -1.27
CAPN3-202ENST00000337571 MAP1LC3BQ9GZQ8 125 aa7.1□□□□□ -1.27
CAPN3-202ENST00000337571 JPT2Q9H910 190 aa7.1□□□□□ -1.27
CAPN3-202ENST00000337571 DAZ3Q9NR90 486 aaKnown RBP7.1□□□□□ -1.27
CAPN3-202ENST00000337571 A0A087WX48 190 aa7.09□□□□□ -1.27
CAPN3-202ENST00000337571 M0R381 172 aa7.09□□□□□ -1.27
CAPN3-202ENST00000337571 SH2D1AO60880 128 aa7.09□□□□□ -1.27
CAPN3-202ENST00000337571 CRIP1P50238 77 aa7.09□□□□□ -1.27
CAPN3-202ENST00000337571 HAMPP81172 84 aa7.09□□□□□ -1.27
CAPN3-202ENST00000337571 ELOBQ15370 118 aa7.09□□□□□ -1.27
CAPN3-202ENST00000337571 DNLZQ5SXM8 178 aa7.09□□□□□ -1.27
CAPN3-202ENST00000337571 C14orf178Q8N769 122 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-202ENST00000337571 SFRP2Q96HF1 295 aa7.09□□□□□ -1.27
CAPN3-202ENST00000337571 TCEAL7Q9BRU2 100 aa7.09□□□□□ -1.27
CAPN3-202ENST00000337571 TMSB15BA0A087X1C1 80 aa7.08□□□□□ -1.28
CAPN3-202ENST00000337571 LECT2O14960 151 aa7.08□□□□□ -1.28
CAPN3-202ENST00000337571 FHITP49789 147 aa7.08□□□□□ -1.28
CAPN3-202ENST00000337571 COX8CQ7Z4L0 72 aa7.08□□□□□ -1.28
CAPN3-202ENST00000337571 ZFP82Q8N141 532 aa7.08□□□□□ -1.28
CAPN3-202ENST00000337571 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-202ENST00000337571 A0A087WWL8 130 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 KANTRA0A1W2PQU2 76 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 S100A9P06702 114 aaKnown RBP7.07□□□□□ -1.28
CAPN3-202ENST00000337571 LINC00694P0DN24 101 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 RPL36AP83881 106 aaKnown RBP7.07□□□□□ -1.28
CAPN3-202ENST00000337571 ZNF674Q2M3X9 581 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 UFSP1Q6NVU6 142 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 ALKAL2Q6UX46 152 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 SLC7A5P1Q8MH63 180 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 Q8N976 141 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-202ENST00000337571 BAALCQ8WXS3 180 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 RPL36ALQ969Q0 106 aaKnown RBP7.07□□□□□ -1.28
CAPN3-202ENST00000337571 ZNF471Q9BX82 626 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-202ENST00000337571 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 Q9UF83 564 aa7.07□□□□□ -1.28
CAPN3-202ENST00000337571 VPS13BQ7Z7G8 4022 aa7.06□□□□□ -1.28
CAPN3-202ENST00000337571 IGKV2D-24A0A075B6R9 120 aa7.06□□□□□ -1.28
CAPN3-202ENST00000337571 TRBV10-1A0A0K0K1A3 114 aa7.06□□□□□ -1.28
CAPN3-202ENST00000337571 TRBV6-1A0A0K0K1D8 114 aa7.06□□□□□ -1.28
CAPN3-202ENST00000337571 RBFOX3A6NFN3 312 aa7.06□□□□□ -1.28
CAPN3-202ENST00000337571 TMEM262E9PQX1 116 aa7.06□□□□□ -1.28
CAPN3-202ENST00000337571 LTAP01374 205 aa7.06□□□□□ -1.28
CAPN3-202ENST00000337571 PLA2G1BP04054 148 aaKnown RBP7.06□□□□□ -1.28
CAPN3-202ENST00000337571 AKR1C3P42330 323 aa7.06□□□□□ -1.28
CAPN3-202ENST00000337571 KLK12Q9UKR0 248 aa7.06□□□□□ -1.28
CAPN3-202ENST00000337571 HERC1Q15751 4861 aa7.06□□□□□ -1.28
CAPN3-202ENST00000337571 TRBV7-3A0A075B6L6 115 aa7.05□□□□□ -1.28
CAPN3-202ENST00000337571 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-202ENST00000337571 PAGE4O60829 102 aa7.05□□□□□ -1.28
CAPN3-202ENST00000337571 Q0VG73 95 aa7.05□□□□□ -1.28
CAPN3-202ENST00000337571 CLLU1Q5K131 121 aa7.05□□□□□ -1.28
CAPN3-202ENST00000337571 NIT1Q86X76 327 aa7.05□□□□□ -1.28
CAPN3-202ENST00000337571 SFT2D1Q8WV19 159 aa7.05□□□□□ -1.28
CAPN3-202ENST00000337571 UBE2WQ96B02 151 aa7.05□□□□□ -1.28
CAPN3-202ENST00000337571 CHCHD7Q9BUK0 85 aa7.05□□□□□ -1.28
CAPN3-202ENST00000337571 FAM30AQ9NZY2 134 aa7.05□□□□□ -1.28
CAPN3-202ENST00000337571 LINC00862A6NCI5 91 aa7.04□□□□□ -1.28
CAPN3-202ENST00000337571 UMAD1C9J7I0 102 aa7.04□□□□□ -1.28
CAPN3-202ENST00000337571 H3BS24 57 aa7.04□□□□□ -1.28
CAPN3-202ENST00000337571 RAB4BP61018 213 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms