RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 RPL39LQ96EH5 51 aaKnown RBP9.41□□□□□ -0.9
LIMK1-201ENST00000336180 PHLDA3Q9Y5J5 127 aa9.41□□□□□ -0.9
LIMK1-201ENST00000336180 TEX48A0A1B0GUV7 120 aa9.4□□□□□ -0.9
LIMK1-201ENST00000336180 SYS1-DBNDD2H3BUS1 97 aa9.4□□□□□ -0.9
LIMK1-201ENST00000336180 OVOL1O14753 267 aa9.4□□□□□ -0.9
LIMK1-201ENST00000336180 TNFRSF6BO95407 300 aa9.4□□□□□ -0.9
LIMK1-201ENST00000336180 OR5AL1P0C617 328 aa9.4□□□□□ -0.9
LIMK1-201ENST00000336180 CD28P10747 220 aa9.4□□□□□ -0.9
LIMK1-201ENST00000336180 DEFB131AP59861 70 aa9.4□□□□□ -0.9
LIMK1-201ENST00000336180 MUC4Q99102 2169 aa9.4□□□□□ -0.9
LIMK1-201ENST00000336180 GAGE5Q13069 117 aa9.4□□□□□ -0.91
LIMK1-201ENST00000336180 GAGE6Q13070 117 aa9.4□□□□□ -0.91
LIMK1-201ENST00000336180 FAM74A4Q5TZK3 123 aa9.4□□□□□ -0.91
LIMK1-201ENST00000336180 ZNF493Q6ZR52 646 aa9.4□□□□□ -0.91
LIMK1-201ENST00000336180 COX8CQ7Z4L0 72 aa9.4□□□□□ -0.91
LIMK1-201ENST00000336180 CD300EQ496F6 205 aaPredicted RBP9.39□□□□□ -0.91
LIMK1-201ENST00000336180 VWFP04275 2813 aa9.39□□□□□ -0.91
LIMK1-201ENST00000336180 TRAV21A0A0B4J279 112 aa9.39□□□□□ -0.91
LIMK1-201ENST00000336180 KRTAP1-1Q07627 177 aa9.39□□□□□ -0.91
LIMK1-201ENST00000336180 TMEM61Q8N0U2 210 aa9.39□□□□□ -0.91
LIMK1-201ENST00000336180 MTURNQ8N3F0 131 aa9.39□□□□□ -0.91
LIMK1-201ENST00000336180 TMEM191AQ9H0A3 160 aa9.39□□□□□ -0.91
LIMK1-201ENST00000336180 MDFICQ9P1T7 246 aa9.39□□□□□ -0.91
LIMK1-201ENST00000336180 ELANEP08246 267 aa9.39□□□□□ -0.91
LIMK1-201ENST00000336180 C5orf47Q569G3 176 aa9.39□□□□□ -0.91
LIMK1-201ENST00000336180 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
LIMK1-201ENST00000336180 UBE2E2Q96LR5 201 aa9.39□□□□□ -0.91
LIMK1-201ENST00000336180 NUDT3O95989 172 aa9.38□□□□□ -0.91
LIMK1-201ENST00000336180 MRPL53Q96EL3 112 aaKnown RBP9.38□□□□□ -0.91
LIMK1-201ENST00000336180 LEPP41159 167 aa9.38□□□□□ -0.91
LIMK1-201ENST00000336180 ASIPP42127 132 aa9.38□□□□□ -0.91
LIMK1-201ENST00000336180 CACNG7P62955 275 aa9.38□□□□□ -0.91
LIMK1-201ENST00000336180 MAP1LC3CQ9BXW4 147 aa9.38□□□□□ -0.91
LIMK1-201ENST00000336180 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
LIMK1-201ENST00000336180 IGHV3-73A0A0B4J1V6 119 aa9.37□□□□□ -0.91
LIMK1-201ENST00000336180 NBEAL2Q6ZNJ1 2754 aa9.37□□□□□ -0.91
LIMK1-201ENST00000336180 RNASE3P12724 160 aaKnown RBP9.37□□□□□ -0.91
LIMK1-201ENST00000336180 SNRPD3P62318 126 aaKnown RBP9.37□□□□□ -0.91
LIMK1-201ENST00000336180 FAM159AQ6UWV7 190 aa9.37□□□□□ -0.91
LIMK1-201ENST00000336180 DEFB125Q8N687 156 aa9.37□□□□□ -0.91
LIMK1-201ENST00000336180 ZNF747Q9BV97 191 aa9.37□□□□□ -0.91
LIMK1-201ENST00000336180 MRPL16Q9NX20 251 aaKnown RBP9.37□□□□□ -0.91
LIMK1-201ENST00000336180 IGHV3OR16-12A0A075B7B8 117 aa9.36□□□□□ -0.91
LIMK1-201ENST00000336180 F5H697 171 aa9.36□□□□□ -0.91
LIMK1-201ENST00000336180 K7EMT4 169 aa9.36□□□□□ -0.91
LIMK1-201ENST00000336180 K7EQG2 157 aa9.36□□□□□ -0.91
LIMK1-201ENST00000336180 DYNLRB2Q8TF09 96 aa9.36□□□□□ -0.91
LIMK1-201ENST00000336180 MAP1LC3AQ9H492 121 aa9.36□□□□□ -0.91
LIMK1-201ENST00000336180 HIVEP1P15822 2718 aa9.36□□□□□ -0.91
LIMK1-201ENST00000336180 TEP1Q99973 2627 aaKnown RBP9.36□□□□□ -0.91
LIMK1-201ENST00000336180 LINC01619G3V211 115 aa9.36□□□□□ -0.91
LIMK1-201ENST00000336180 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.36□□□□□ -0.91
LIMK1-201ENST00000336180 TENM1Q9UKZ4 2725 aa9.35□□□□□ -0.91
LIMK1-201ENST00000336180 NSUN5P1Q3KNT7 163 aa9.35□□□□□ -0.91
LIMK1-201ENST00000336180 OR2K2Q8NGT1 345 aa9.35□□□□□ -0.91
LIMK1-201ENST00000336180 TMEM158Q8WZ71 300 aa9.35□□□□□ -0.91
LIMK1-201ENST00000336180 A0A0J9YX75 114 aa9.35□□□□□ -0.91
LIMK1-201ENST00000336180 UFSP1Q6NVU6 142 aa9.35□□□□□ -0.91
LIMK1-201ENST00000336180 DKK2Q9UBU2 259 aa9.35□□□□□ -0.91
LIMK1-201ENST00000336180 RBMY1A1P0DJD3 496 aaKnown RBP9.35□□□□□ -0.91
LIMK1-201ENST00000336180 RBMY1CP0DJD4 496 aa9.35□□□□□ -0.91
LIMK1-201ENST00000336180 RBMY1FQ15415 496 aaKnown RBP9.35□□□□□ -0.91
LIMK1-201ENST00000336180 U3KQK5 164 aa9.35□□□□□ -0.91
LIMK1-201ENST00000336180 Q8N1Y9 231 aa9.34□□□□□ -0.91
LIMK1-201ENST00000336180 OR9G4Q8NGQ1 327 aa9.34□□□□□ -0.91
LIMK1-201ENST00000336180 RAX2Q96IS3 184 aa9.34□□□□□ -0.91
LIMK1-201ENST00000336180 ATRQ13535 2644 aa9.34□□□□□ -0.91
LIMK1-201ENST00000336180 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
LIMK1-201ENST00000336180 BVES-AS1Q5T3Y7 98 aa9.34□□□□□ -0.91
LIMK1-201ENST00000336180 GATD1Q8NB37 220 aa9.34□□□□□ -0.91
LIMK1-201ENST00000336180 TTTY13Q9BZ97 58 aa9.34□□□□□ -0.91
LIMK1-201ENST00000336180 WFDC10AQ9H1F0 79 aa9.34□□□□□ -0.91
LIMK1-201ENST00000336180 ERG28Q9UKR5 140 aa9.34□□□□□ -0.91
LIMK1-201ENST00000336180 PET117Q6UWS5 81 aa9.33□□□□□ -0.92
LIMK1-201ENST00000336180 MYOZ3Q8TDC0 251 aa9.33□□□□□ -0.92
LIMK1-201ENST00000336180 ZNF580Q9UK33 172 aa9.33□□□□□ -0.92
LIMK1-201ENST00000336180 ANAPC13Q9BS18 74 aa9.33□□□□□ -0.92
LIMK1-201ENST00000336180 RBMY1BA6NDE4 496 aaKnown RBP9.33□□□□□ -0.92
LIMK1-201ENST00000336180 RBMY1EA6NEQ0 496 aaKnown RBP9.33□□□□□ -0.92
LIMK1-201ENST00000336180 RBMY1DP0C7P1 496 aaKnown RBP9.33□□□□□ -0.92
LIMK1-201ENST00000336180 FAM19A4Q96LR4 140 aa9.33□□□□□ -0.92
LIMK1-201ENST00000336180 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
LIMK1-201ENST00000336180 CSDC2Q9Y534 153 aaKnown RBP9.33□□□□□ -0.92
LIMK1-201ENST00000336180 C7orf71A4D174 169 aa9.32□□□□□ -0.92
LIMK1-201ENST00000336180 HBDP02042 147 aa9.32□□□□□ -0.92
LIMK1-201ENST00000336180 SMIM17P0DL12 118 aa9.32□□□□□ -0.92
LIMK1-201ENST00000336180 NRACQ8N912 160 aa9.32□□□□□ -0.92
LIMK1-201ENST00000336180 PRSS1P07477 247 aa9.32□□□□□ -0.92
LIMK1-201ENST00000336180 ZC2HC1BQ5TFG8 222 aa9.32□□□□□ -0.92
LIMK1-201ENST00000336180 C1QTNF4Q9BXJ3 329 aa9.32□□□□□ -0.92
LIMK1-201ENST00000336180 KLLNB2CW77 178 aa9.31□□□□□ -0.92
LIMK1-201ENST00000336180 LINC01006Q8NI28 216 aa9.31□□□□□ -0.92
LIMK1-201ENST00000336180 IFI27L1Q96BM0 104 aa9.31□□□□□ -0.92
LIMK1-201ENST00000336180 ZNF418Q8TF45 676 aaPredicted RBP9.31□□□□□ -0.92
LIMK1-201ENST00000336180 RASL10AQ92737 203 aa9.31□□□□□ -0.92
LIMK1-201ENST00000336180 PROK1P58294 105 aa9.31□□□□□ -0.92
LIMK1-201ENST00000336180 JMJD8Q96S16 334 aa9.31□□□□□ -0.92
LIMK1-201ENST00000336180 XCL2Q9UBD3 114 aa9.31□□□□□ -0.92
LIMK1-201ENST00000336180 CD5LO43866 347 aa9.3□□□□□ -0.92
LIMK1-201ENST00000336180 PTH2Q96A98 100 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms