RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.34□□□□□ -0.43
CHGA-202ENST00000334654 WWC2-AS2Q96NR7 200 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 SAMD10Q9BYL1 202 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 URGCP-MRPS24S4R325 110 aa12.34□□□□□ -0.43
CHGA-202ENST00000334654 ATP5G1P05496 136 aa12.33□□□□□ -0.44
CHGA-202ENST00000334654 CRYGDP07320 174 aa12.33□□□□□ -0.44
CHGA-202ENST00000334654 HOXA5P20719 270 aa12.33□□□□□ -0.44
CHGA-202ENST00000334654 FAM3BP58499 235 aaPredicted RBP12.33□□□□□ -0.44
CHGA-202ENST00000334654 RASL11AQ6T310 242 aa12.33□□□□□ -0.44
CHGA-202ENST00000334654 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
CHGA-202ENST00000334654 A8MWV9 139 aa12.32□□□□□ -0.44
CHGA-202ENST00000334654 IGHV3-53P01767 116 aa12.32□□□□□ -0.44
CHGA-202ENST00000334654 OR4C5Q8NGB2 326 aa12.32□□□□□ -0.44
CHGA-202ENST00000334654 A0A1B0GUT8 65 aa12.31□□□□□ -0.44
CHGA-202ENST00000334654 FHL2Q14192 279 aa12.31□□□□□ -0.44
CHGA-202ENST00000334654 PHLDA1Q8WV24 401 aaPredicted RBP12.31□□□□□ -0.44
CHGA-202ENST00000334654 DEFB131BA0A096LNP1 70 aa12.3□□□□□ -0.44
CHGA-202ENST00000334654 TRAV10A0A0B4J240 114 aa12.3□□□□□ -0.44
CHGA-202ENST00000334654 LINC00315P59091 139 aa12.3□□□□□ -0.44
CHGA-202ENST00000334654 A0A087WWL8 130 aa12.29□□□□□ -0.44
CHGA-202ENST00000334654 TGIF2-C20orf24A0A0A6YYL0 155 aa12.29□□□□□ -0.44
CHGA-202ENST00000334654 HTN3P15516 51 aa12.29□□□□□ -0.44
CHGA-202ENST00000334654 TWIST1Q15672 202 aa12.29□□□□□ -0.44
CHGA-202ENST00000334654 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
CHGA-202ENST00000334654 IGHV3-73A0A0B4J1V6 119 aa12.28□□□□□ -0.44
CHGA-202ENST00000334654 C1orf196B1AJZ1 125 aa12.28□□□□□ -0.44
CHGA-202ENST00000334654 EVI2AP22794 236 aa12.28□□□□□ -0.44
CHGA-202ENST00000334654 ZFP2Q6ZN57 461 aa12.28□□□□□ -0.44
CHGA-202ENST00000334654 Q6ZSN1 163 aa12.28□□□□□ -0.44
CHGA-202ENST00000334654 C14orf178Q8N769 122 aaPredicted RBP12.28□□□□□ -0.44
CHGA-202ENST00000334654 MUC7Q8TAX7 377 aa12.28□□□□□ -0.44
CHGA-202ENST00000334654 A0A1B0GXF2 115 aa12.27□□□□□ -0.44
CHGA-202ENST00000334654 F5H768 121 aa12.27□□□□□ -0.44
CHGA-202ENST00000334654 CIDEAO60543 219 aa12.27□□□□□ -0.44
CHGA-202ENST00000334654 RPS10P46783 165 aaKnown RBP12.27□□□□□ -0.44
CHGA-202ENST00000334654 AP1S3Q96PC3 154 aa12.27□□□□□ -0.44
CHGA-202ENST00000334654 DYNC2H1Q8NCM8 4307 aaKnown RBP12.27□□□□□ -0.45
CHGA-202ENST00000334654 MT-ND6P03923 174 aa12.27□□□□□ -0.45
CHGA-202ENST00000334654 GATA1P15976 413 aaPredicted RBP12.27□□□□□ -0.45
CHGA-202ENST00000334654 RAB5BP61020 215 aa12.27□□□□□ -0.45
CHGA-202ENST00000334654 RIGQ13278 110 aa12.27□□□□□ -0.45
CHGA-202ENST00000334654 MRPL54Q6P161 138 aaKnown RBP12.27□□□□□ -0.45
CHGA-202ENST00000334654 BORCS7Q96B45 105 aa12.27□□□□□ -0.45
CHGA-202ENST00000334654 TENM2Q9NT68 2774 aa12.26□□□□□ -0.45
CHGA-202ENST00000334654 STARD9Q9P2P6 4700 aa12.26□□□□□ -0.45
CHGA-202ENST00000334654 A0A1B0GW15 77 aa12.26□□□□□ -0.45
CHGA-202ENST00000334654 TRGC1P0CF51 173 aa12.26□□□□□ -0.45
CHGA-202ENST00000334654 FAM74A4Q5TZK3 123 aa12.26□□□□□ -0.45
CHGA-202ENST00000334654 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
CHGA-202ENST00000334654 VSIG2Q96IQ7 327 aa12.26□□□□□ -0.45
CHGA-202ENST00000334654 GNB1LQ9BYB4 327 aa12.26□□□□□ -0.45
CHGA-202ENST00000334654 TRGV4A0A0C4DH28 118 aa12.25□□□□□ -0.45
CHGA-202ENST00000334654 RHODO00212 210 aa12.25□□□□□ -0.45
CHGA-202ENST00000334654 CRYBA4P53673 196 aa12.25□□□□□ -0.45
CHGA-202ENST00000334654 S100A8P05109 93 aa12.24□□□□□ -0.45
CHGA-202ENST00000334654 ZFAND6Q6FIF0 208 aa12.24□□□□□ -0.45
CHGA-202ENST00000334654 TMEM191AQ9H0A3 160 aa12.24□□□□□ -0.45
CHGA-202ENST00000334654 DPH3P1Q9H4G8 78 aa12.24□□□□□ -0.45
CHGA-202ENST00000334654 PRO0255Q9UI72 69 aa12.24□□□□□ -0.45
CHGA-202ENST00000334654 HHLA3Q9XRX5 114 aa12.24□□□□□ -0.45
CHGA-202ENST00000334654 TRAV26-1A0A087WT03 109 aa12.23□□□□□ -0.45
CHGA-202ENST00000334654 SLC25A29Q8N8R3 303 aa12.23□□□□□ -0.45
CHGA-202ENST00000334654 GATD1Q8NB37 220 aa12.23□□□□□ -0.45
CHGA-202ENST00000334654 Q9UF83 564 aa12.23□□□□□ -0.45
CHGA-202ENST00000334654 CAMPP49913 170 aa12.22□□□□□ -0.45
CHGA-202ENST00000334654 HBBP68871 147 aa12.22□□□□□ -0.45
CHGA-202ENST00000334654 SLAQ13239 276 aa12.22□□□□□ -0.45
CHGA-202ENST00000334654 A0A0J9YY99 117 aa12.21□□□□□ -0.45
CHGA-202ENST00000334654 TRBV6-4A0A1B0GX49 114 aa12.21□□□□□ -0.45
CHGA-202ENST00000334654 NUPR2A6NF83 97 aa12.21□□□□□ -0.45
CHGA-202ENST00000334654 HLA-DQA1P01909 254 aa12.21□□□□□ -0.45
CHGA-202ENST00000334654 SMIM17P0DL12 118 aa12.21□□□□□ -0.45
CHGA-202ENST00000334654 RAB4BP61018 213 aa12.21□□□□□ -0.45
CHGA-202ENST00000334654 RNF185Q96GF1 192 aa12.21□□□□□ -0.45
CHGA-202ENST00000334654 PAX4O43316 350 aa12.21□□□□□ -0.46
CHGA-202ENST00000334654 TMA7Q9Y2S6 64 aaKnown RBP12.21□□□□□ -0.46
CHGA-202ENST00000334654 LOC100131303A0A0U1RQF7 123 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 IGLL5B9A064 214 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 H3BNG1 76 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 TRGC2P03986 189 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 MGPP08493 103 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 P0DMU3 169 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 RAB4AP20338 218 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 ZNF56Q15929 161 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 SMIM15Q7Z3B0 74 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 AMN1Q8IY45 258 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 TRAPPC1Q9Y5R8 145 aa12.2□□□□□ -0.46
CHGA-202ENST00000334654 C3orf84H3BNL1 204 aa12.19□□□□□ -0.46
CHGA-202ENST00000334654 K7EQD1 137 aa12.19□□□□□ -0.46
CHGA-202ENST00000334654 CASC10Q5T4H9 136 aa12.19□□□□□ -0.46
CHGA-202ENST00000334654 FAM104BQ5XKR9 115 aa12.19□□□□□ -0.46
CHGA-202ENST00000334654 SUMO4Q6EEV6 95 aa12.19□□□□□ -0.46
CHGA-202ENST00000334654 F5H697 171 aa12.18□□□□□ -0.46
CHGA-202ENST00000334654 M0QY20 66 aa12.18□□□□□ -0.46
CHGA-202ENST00000334654 PHOX2AO14813 284 aa12.18□□□□□ -0.46
CHGA-202ENST00000334654 APLNQ9ULZ1 77 aa12.18□□□□□ -0.46
CHGA-202ENST00000334654 TRAV26-2A0A0B4J265 109 aa12.17□□□□□ -0.46
CHGA-202ENST00000334654 GAS8-AS1O95177 125 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms