RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 IGKV1D-12P01611 117 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 IGLC6P0CF74 106 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 PCSK5Q92824 1860 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 ABCA12Q86UK0 2595 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 K7EM74 188 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 DEFB131AP59861 70 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 TEX36Q5VZQ5 186 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 TRAV23DV6A0A075B6W5 121 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 Q8N1Y9 231 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 CRIPAKQ8N1N5 446 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 LINC00473A8K010 186 aa8.22□□□□□ -1.09
SPTBN1-201ENST00000333896 SLC25A45Q8N413 288 aa8.21□□□□□ -1.09
SPTBN1-201ENST00000333896 NDUFA4L2Q9NRX3 87 aa8.21□□□□□ -1.09
SPTBN1-201ENST00000333896 UPK3BQ9BT76 320 aa8.21□□□□□ -1.1
SPTBN1-201ENST00000333896 POLQO75417 2590 aa8.21□□□□□ -1.1
SPTBN1-201ENST00000333896 IGKV1OR2-108A0A075B7D4 117 aa8.21□□□□□ -1.1
SPTBN1-201ENST00000333896 C11orf86A6NJI1 115 aa8.21□□□□□ -1.1
SPTBN1-201ENST00000333896 C5orf24Q7Z6I8 188 aa8.21□□□□□ -1.1
SPTBN1-201ENST00000333896 TRAV4A0A0B4J268 109 aa8.21□□□□□ -1.1
SPTBN1-201ENST00000333896 TEX49A0A1B0GTD5 131 aa8.21□□□□□ -1.1
SPTBN1-201ENST00000333896 C2orf70A6NJV1 201 aa8.21□□□□□ -1.1
SPTBN1-201ENST00000333896 PRR4Q16378 134 aa8.21□□□□□ -1.1
SPTBN1-201ENST00000333896 NUPR1O60356 82 aa8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 IGHV1-8P0DP01 117 aa8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 H3BUX3 64 aa8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 TIRAPP58753 221 aa8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 A0A0G2JRQ6 117 aa8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 Q9HAA7 133 aa8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 LINC01619G3V211 115 aa8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 LINC00694P0DN24 101 aa8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 TRBV12-3P01733 135 aa8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 ZFP36L1Q07352 338 aaKnown RBP8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 SP5Q6BEB4 398 aaPredicted RBP8.2□□□□□ -1.1
SPTBN1-201ENST00000333896 BUB1B-PAK6H3BSN5 160 aa8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 TIMM17BO60830 172 aa8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 GATA4P43694 442 aa8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 APOC4P55056 127 aa8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 TOMM6Q96B49 74 aa8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 USP17L23D6RBM5 183 aa8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 GNLYP22749 145 aa8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 BRD3OSQ6XYD6 125 aa8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 RNASE6Q93091 150 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 FAM19A5Q7Z5A7 132 aaPredicted RBP8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 CCDC179H3BU77 68 aa8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 OPRPNQ99935 248 aaPredicted RBP8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 ASPHD1Q5U4P2 390 aa8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 MRPL53Q96EL3 112 aaKnown RBP8.19□□□□□ -1.1
SPTBN1-201ENST00000333896 ZNF524Q96C55 264 aa8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 Q6ZQT7 251 aa8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 VPREB3Q9UKI3 123 aa8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 MINOS1Q5TGZ0 78 aa8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 RNF114Q9Y508 228 aa8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 MINOS1-NBL1R4GNA1 71 aa8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 ZNF134P52741 427 aa8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 BLCAPP62952 87 aa8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 IGKV2-29A2NJV5 120 aaPredicted RBP8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 CSRP2Q16527 193 aa8.18□□□□□ -1.1
SPTBN1-201ENST00000333896 C9orf106Q8NAJ2 232 aa8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 MBD3L4A6NDZ8 208 aaPredicted RBP8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 MBD3L3A6NE82 208 aaPredicted RBP8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 MBD3L5A6NJ08 208 aaPredicted RBP8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 RPS28P62857 69 aaKnown RBP8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 MBD3L2Q8NHZ7 208 aaPredicted RBP8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 LY6DQ14210 128 aa8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 WISP1O95388 367 aa8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 TRBV6-1A0A0K0K1D8 114 aa8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 IGHV4-59P01825 116 aa8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 PRORYQ9H606 182 aa8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 IGHV1-18A0A0C4DH31 117 aa8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 LINC00526Q96FQ7 95 aa8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 NCR3O14931 201 aa8.17□□□□□ -1.1
SPTBN1-201ENST00000333896 H3BRN7 92 aa8.16□□□□□ -1.1
SPTBN1-201ENST00000333896 LMO1P25800 156 aa8.16□□□□□ -1.1
SPTBN1-201ENST00000333896 SND1-IT1Q9HBX3 110 aa8.16□□□□□ -1.1
SPTBN1-201ENST00000333896 PSPNO60542 156 aa8.16□□□□□ -1.1
SPTBN1-201ENST00000333896 IGHV1-46P01743 117 aa8.16□□□□□ -1.1
SPTBN1-201ENST00000333896 WI2-2373I1.2A0A1W2PRP0 233 aa8.16□□□□□ -1.1
SPTBN1-201ENST00000333896 NANOS2P60321 138 aaKnown RBP8.16□□□□□ -1.1
SPTBN1-201ENST00000333896 OVOL3O00110 214 aa8.16□□□□□ -1.1
SPTBN1-201ENST00000333896 HIST2H2BCQ6DN03 193 aa8.16□□□□□ -1.1
SPTBN1-201ENST00000333896 CFAP126Q5VTH2 177 aa8.16□□□□□ -1.1
SPTBN1-201ENST00000333896 LINC00205P59089 165 aa8.15□□□□□ -1.1
SPTBN1-201ENST00000333896 CXCL6P80162 114 aa8.15□□□□□ -1.1
SPTBN1-201ENST00000333896 PRR20EP86478 221 aa8.15□□□□□ -1.1
SPTBN1-201ENST00000333896 PRR20CP86479 221 aa8.15□□□□□ -1.1
SPTBN1-201ENST00000333896 PRR20DP86480 221 aa8.15□□□□□ -1.1
SPTBN1-201ENST00000333896 PRR20BP86481 221 aa8.15□□□□□ -1.1
SPTBN1-201ENST00000333896 PRR20AP86496 221 aa8.15□□□□□ -1.1
SPTBN1-201ENST00000333896 MLANAQ16655 118 aa8.15□□□□□ -1.1
SPTBN1-201ENST00000333896 IGHV1-69P01742 117 aa8.15□□□□□ -1.1
SPTBN1-201ENST00000333896 UFSP1Q6NVU6 142 aa8.15□□□□□ -1.11
SPTBN1-201ENST00000333896 C20orf197Q8N268 126 aa8.15□□□□□ -1.11
SPTBN1-201ENST00000333896 TRBV30A0A0K0K1B3 111 aa8.15□□□□□ -1.11
SPTBN1-201ENST00000333896 MRPL36Q9P0J6 103 aaKnown RBP8.15□□□□□ -1.11
SPTBN1-201ENST00000333896 FAM120AOSQ5T036 256 aa8.14□□□□□ -1.11
SPTBN1-201ENST00000333896 EFNA2O43921 213 aa8.14□□□□□ -1.11
SPTBN1-201ENST00000333896 HOXB4P17483 251 aaPredicted RBP8.14□□□□□ -1.11
SPTBN1-201ENST00000333896 DAND5Q8N907 189 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms