RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 DUX5Q96PT3 197 aa10.02□□□□□ -0.81
TUBA1B-201ENST00000332858 SPCS1Q9Y6A9 102 aa10.02□□□□□ -0.81
TUBA1B-201ENST00000332858 EPG5Q9HCE0 2579 aa10.02□□□□□ -0.81
TUBA1B-201ENST00000332858 CD7P09564 240 aa10.02□□□□□ -0.81
TUBA1B-201ENST00000332858 PLNP26678 52 aa10.02□□□□□ -0.81
TUBA1B-201ENST00000332858 SAMD5Q5TGI4 173 aa10.02□□□□□ -0.81
TUBA1B-201ENST00000332858 GTF2H5Q6ZYL4 71 aa10.02□□□□□ -0.81
TUBA1B-201ENST00000332858 NIPBLQ6KC79 2804 aaeCLIP10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 PRSS29PA6NIE9 313 aa10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 PSMG4Q5JS54 123 aa10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 FAM159AQ6UWV7 190 aa10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 TM2D2Q9BX73 214 aa10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 HLA-DRB4P13762 266 aa10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 EMP1P54849 157 aa10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 MDFICQ9P1T7 246 aa10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 HLA-DRB4X5D2U9 266 aa10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 CHD6Q8TD26 2715 aa10.01□□□□□ -0.81
TUBA1B-201ENST00000332858 TSHBP01222 138 aa10□□□□□ -0.81
TUBA1B-201ENST00000332858 MED14OSP0DP75 135 aa10□□□□□ -0.81
TUBA1B-201ENST00000332858 RIPPLY3P57055 190 aa10□□□□□ -0.81
TUBA1B-201ENST00000332858 SONP18583 2426 aaKnown RBP10□□□□□ -0.81
TUBA1B-201ENST00000332858 K7EMT4 169 aa10□□□□□ -0.81
TUBA1B-201ENST00000332858 NXPH4O95158 308 aa10□□□□□ -0.81
TUBA1B-201ENST00000332858 CRYGDP07320 174 aa10□□□□□ -0.81
TUBA1B-201ENST00000332858 RPL39P62891 51 aaKnown RBP10□□□□□ -0.81
TUBA1B-201ENST00000332858 SUMO4Q6EEV6 95 aa10□□□□□ -0.81
TUBA1B-201ENST00000332858 SETD2Q9BYW2 2564 aaPredicted RBP9.99□□□□□ -0.81
TUBA1B-201ENST00000332858 TRBV7-9A0A0J9YWB2 115 aa9.99□□□□□ -0.81
TUBA1B-201ENST00000332858 FAM74A4Q5TZK3 123 aa9.99□□□□□ -0.81
TUBA1B-201ENST00000332858 SYNJ2BPP57105 145 aa9.99□□□□□ -0.81
TUBA1B-201ENST00000332858 POM121L12Q8N7R1 296 aa9.99□□□□□ -0.81
TUBA1B-201ENST00000332858 F5H697 171 aa9.98□□□□□ -0.81
TUBA1B-201ENST00000332858 SLC25A16P16260 332 aa9.98□□□□□ -0.81
TUBA1B-201ENST00000332858 ID1P41134 155 aa9.98□□□□□ -0.81
TUBA1B-201ENST00000332858 FABP2P12104 132 aa9.98□□□□□ -0.81
TUBA1B-201ENST00000332858 POLR2KP53803 58 aaKnown RBP9.98□□□□□ -0.81
TUBA1B-201ENST00000332858 HIST1H4GQ99525 98 aa9.98□□□□□ -0.81
TUBA1B-201ENST00000332858 TP53TG1Q9Y2A0 90 aa9.98□□□□□ -0.81
TUBA1B-201ENST00000332858 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 IGHV4OR15-8A0A075B7B6 117 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 A0A087WW49 117 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 OR11H12B2RN74 326 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 SPINK13Q1W4C9 94 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 KLHL30-AS1Q8NEE0 82 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 OR11H1Q8NG94 326 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 OR11H2Q8NH07 326 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 PRB1P04280 392 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 ZFP2Q6ZN57 461 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 Q8N1Y9 231 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 PRADC1Q9BSG0 188 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 CYSLTR1Q9Y271 337 aa9.97□□□□□ -0.81
TUBA1B-201ENST00000332858 A0A096LNT2 108 aa9.96□□□□□ -0.81
TUBA1B-201ENST00000332858 A0A0J9YX75 114 aa9.96□□□□□ -0.81
TUBA1B-201ENST00000332858 MYMXA0A1B0GTQ4 84 aa9.96□□□□□ -0.81
TUBA1B-201ENST00000332858 ZNF580Q9UK33 172 aa9.96□□□□□ -0.81
TUBA1B-201ENST00000332858 TRBV7-3A0A075B6L6 115 aa9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 IGHV3-16A0A0C4DH30 117 aa9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 C12orf74Q32Q52 190 aa9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 CD300EQ496F6 205 aaPredicted RBP9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 APCP25054 2843 aa9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 SDHAF1A6NFY7 115 aa9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 IGIPA6NJ69 53 aa9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 LGALS1P09382 135 aaKnown RBP9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 HIST2H2BDQ6DRA6 164 aa9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 MORN3Q6PF18 240 aaPredicted RBP9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 PLEKHB2Q96CS7 222 aa9.96□□□□□ -0.82
TUBA1B-201ENST00000332858 IGLL5B9A064 214 aa9.95□□□□□ -0.82
TUBA1B-201ENST00000332858 GEMIN7Q9H840 131 aaKnown RBP9.95□□□□□ -0.82
TUBA1B-201ENST00000332858 IGLV4-69A0A075B6H9 119 aa9.95□□□□□ -0.82
TUBA1B-201ENST00000332858 C11orf86A6NJI1 115 aa9.95□□□□□ -0.82
TUBA1B-201ENST00000332858 K7EQG2 157 aa9.95□□□□□ -0.82
TUBA1B-201ENST00000332858 K7ERU9 68 aa9.95□□□□□ -0.82
TUBA1B-201ENST00000332858 LINC01356Q8N9X3 169 aa9.95□□□□□ -0.82
TUBA1B-201ENST00000332858 ZNF256Q9Y2P7 627 aaPredicted RBP9.95□□□□□ -0.82
TUBA1B-201ENST00000332858 PRM2P04554 102 aa9.94□□□□□ -0.82
TUBA1B-201ENST00000332858 CRYBA4P53673 196 aa9.94□□□□□ -0.82
TUBA1B-201ENST00000332858 C18orf65Q6ZTR6 163 aa9.94□□□□□ -0.82
TUBA1B-201ENST00000332858 OPRPNQ99935 248 aaPredicted RBP9.94□□□□□ -0.82
TUBA1B-201ENST00000332858 E9PLD3 99 aa9.94□□□□□ -0.82
TUBA1B-201ENST00000332858 NOTCH3Q9UM47 2321 aa9.94□□□□□ -0.82
TUBA1B-201ENST00000332858 WNK1Q9H4A3 2382 aa9.94□□□□□ -0.82
TUBA1B-201ENST00000332858 DEFB136Q30KP8 78 aa9.93□□□□□ -0.82
TUBA1B-201ENST00000332858 OR5A1Q8NGJ0 315 aa9.93□□□□□ -0.82
TUBA1B-201ENST00000332858 C9orf85Q96MD7 179 aa9.93□□□□□ -0.82
TUBA1B-201ENST00000332858 BEX4Q9NWD9 120 aaPredicted RBP9.93□□□□□ -0.82
TUBA1B-201ENST00000332858 CCDC168Q8NDH2 2452 aa9.93□□□□□ -0.82
TUBA1B-201ENST00000332858 PPP1R17O96001 155 aa9.93□□□□□ -0.82
TUBA1B-201ENST00000332858 GATA3P23771 443 aa9.93□□□□□ -0.82
TUBA1B-201ENST00000332858 AMTNQ6UX39 209 aa9.93□□□□□ -0.82
TUBA1B-201ENST00000332858 HOXD3P31249 432 aaPredicted RBP9.93□□□□□ -0.82
TUBA1B-201ENST00000332858 SNRPD3P62318 126 aaKnown RBP9.93□□□□□ -0.82
TUBA1B-201ENST00000332858 TRAV26-1A0A087WT03 109 aa9.92□□□□□ -0.82
TUBA1B-201ENST00000332858 ZNF815PA8K554 130 aa9.92□□□□□ -0.82
TUBA1B-201ENST00000332858 VCYO14598 125 aa9.92□□□□□ -0.82
TUBA1B-201ENST00000332858 COX6B1P14854 86 aa9.92□□□□□ -0.82
TUBA1B-201ENST00000332858 M0QY20 66 aa9.92□□□□□ -0.82
TUBA1B-201ENST00000332858 RBMY1A1P0DJD3 496 aaKnown RBP9.92□□□□□ -0.82
TUBA1B-201ENST00000332858 RBMY1CP0DJD4 496 aa9.92□□□□□ -0.82
TUBA1B-201ENST00000332858 HTN1P15515 57 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms