RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 LOC107984640A0A0U1RRK4 108 aa13.78□□□□□ -0.2
SOCS3-201ENST00000330871 TMEM126AQ9H061 195 aa13.77□□□□□ -0.2
SOCS3-201ENST00000330871 BUB3O43684 328 aa13.77□□□□□ -0.21
SOCS3-201ENST00000330871 ABCA4P78363 2273 aa13.77□□□□□ -0.21
SOCS3-201ENST00000330871 IGIPA6NJ69 53 aa13.77□□□□□ -0.21
SOCS3-201ENST00000330871 PAPPA-AS1Q5QFB9 102 aa13.77□□□□□ -0.21
SOCS3-201ENST00000330871 PHLDA3Q9Y5J5 127 aa13.77□□□□□ -0.21
SOCS3-201ENST00000330871 A0A0B4J2C4 111 aa13.76□□□□□ -0.21
SOCS3-201ENST00000330871 H7C423 109 aa13.76□□□□□ -0.21
SOCS3-201ENST00000330871 LY6G5BQ8NDX9 201 aa13.76□□□□□ -0.21
SOCS3-201ENST00000330871 CD3EP07766 207 aa13.76□□□□□ -0.21
SOCS3-201ENST00000330871 ZNF22P17026 224 aaPredicted RBP13.76□□□□□ -0.21
SOCS3-201ENST00000330871 SPANXA1Q9NS26 97 aa13.76□□□□□ -0.21
SOCS3-201ENST00000330871 OTOGLQ3ZCN5 2332 aa13.75□□□□□ -0.21
SOCS3-201ENST00000330871 FAM236AA0A1B0GUQ0 79 aa13.75□□□□□ -0.21
SOCS3-201ENST00000330871 FAM236BA0A1B0GV22 79 aa13.75□□□□□ -0.21
SOCS3-201ENST00000330871 CEMP1Q6PRD7 247 aaPredicted RBP13.75□□□□□ -0.21
SOCS3-201ENST00000330871 GPHB5Q86YW7 130 aa13.75□□□□□ -0.21
SOCS3-201ENST00000330871 OOSP1A8MZH6 123 aa13.75□□□□□ -0.21
SOCS3-201ENST00000330871 OPRPNQ99935 248 aaPredicted RBP13.75□□□□□ -0.21
SOCS3-201ENST00000330871 ZNF580Q9UK33 172 aa13.75□□□□□ -0.21
SOCS3-201ENST00000330871 CSDC2Q9Y534 153 aaKnown RBP13.75□□□□□ -0.21
SOCS3-201ENST00000330871 TRGV11A0A075B6L2 103 aa13.74□□□□□ -0.21
SOCS3-201ENST00000330871 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.74□□□□□ -0.21
SOCS3-201ENST00000330871 DEFB1P60022 68 aa13.73□□□□□ -0.21
SOCS3-201ENST00000330871 Q6ZSV7 163 aa13.73□□□□□ -0.21
SOCS3-201ENST00000330871 CLEC2BQ92478 149 aa13.73□□□□□ -0.21
SOCS3-201ENST00000330871 ADARB2-AS1A8MUL3 147 aa13.73□□□□□ -0.21
SOCS3-201ENST00000330871 MRPL23Q16540 153 aaKnown RBP13.72□□□□□ -0.21
SOCS3-201ENST00000330871 NRGNQ92686 78 aa13.72□□□□□ -0.21
SOCS3-201ENST00000330871 KLK5Q9Y337 293 aaPredicted RBP13.72□□□□□ -0.21
SOCS3-201ENST00000330871 GNRH2O43555 120 aa13.71□□□□□ -0.21
SOCS3-201ENST00000330871 UBE2E1P51965 193 aa13.71□□□□□ -0.21
SOCS3-201ENST00000330871 ZNF876PQ49A33 203 aa13.71□□□□□ -0.21
SOCS3-201ENST00000330871 ZFAND3Q9H8U3 227 aa13.71□□□□□ -0.21
SOCS3-201ENST00000330871 C9orf153Q5TBE3 101 aa13.7□□□□□ -0.22
SOCS3-201ENST00000330871 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.7□□□□□ -0.22
SOCS3-201ENST00000330871 TRBV30A0A0K0K1B3 111 aa13.7□□□□□ -0.22
SOCS3-201ENST00000330871 PRSS2P07478 247 aa13.7□□□□□ -0.22
SOCS3-201ENST00000330871 C9orf47Q6ZRZ4 202 aa13.7□□□□□ -0.22
SOCS3-201ENST00000330871 JPT2Q9H910 190 aa13.7□□□□□ -0.22
SOCS3-201ENST00000330871 IGHV1-69DA0A0B4J2H0 117 aa13.7□□□□□ -0.22
SOCS3-201ENST00000330871 NPC2P61916 151 aa13.7□□□□□ -0.22
SOCS3-201ENST00000330871 C15orf32Q32M92 178 aa13.7□□□□□ -0.22
SOCS3-201ENST00000330871 APC2O95996 2303 aa13.69□□□□□ -0.22
SOCS3-201ENST00000330871 CLPSL1A2RUU4 121 aa13.69□□□□□ -0.22
SOCS3-201ENST00000330871 ODF3BA8MYP8 253 aa13.69□□□□□ -0.22
SOCS3-201ENST00000330871 TRBV7-7A0A0K0K1E9 115 aa13.69□□□□□ -0.22
SOCS3-201ENST00000330871 ICOSQ9Y6W8 199 aa13.69□□□□□ -0.22
SOCS3-201ENST00000330871 NBASA2RRP1 2371 aa13.68□□□□□ -0.22
SOCS3-201ENST00000330871 Q8NA96 180 aa13.68□□□□□ -0.22
SOCS3-201ENST00000330871 CELSR1Q9NYQ6 3014 aa13.68□□□□□ -0.22
SOCS3-201ENST00000330871 M0R1W7 72 aa13.68□□□□□ -0.22
SOCS3-201ENST00000330871 M0R2P5 195 aa13.68□□□□□ -0.22
SOCS3-201ENST00000330871 LEPROTO15243 131 aa13.68□□□□□ -0.22
SOCS3-201ENST00000330871 EBI3Q14213 229 aa13.68□□□□□ -0.22
SOCS3-201ENST00000330871 TMEM101Q96IK0 257 aa13.68□□□□□ -0.22
SOCS3-201ENST00000330871 DNAJC30Q96LL9 226 aa13.68□□□□□ -0.22
SOCS3-201ENST00000330871 LINC01600Q96MT4 127 aa13.68□□□□□ -0.22
SOCS3-201ENST00000330871 MUC4Q99102 2169 aa13.67□□□□□ -0.22
SOCS3-201ENST00000330871 TMEM223A0PJW6 202 aa13.67□□□□□ -0.22
SOCS3-201ENST00000330871 C16orf92Q96LL3 132 aa13.67□□□□□ -0.22
SOCS3-201ENST00000330871 CLEC19AQ6UXS0 136 aa13.67□□□□□ -0.22
SOCS3-201ENST00000330871 TMEM141Q96I45 108 aa13.67□□□□□ -0.22
SOCS3-201ENST00000330871 C20orf173Q96LM9 149 aa13.67□□□□□ -0.22
SOCS3-201ENST00000330871 BSNQ9UPA5 3926 aa13.67□□□□□ -0.22
SOCS3-201ENST00000330871 MAP1AP78559 2803 aaPredicted RBP13.66□□□□□ -0.22
SOCS3-201ENST00000330871 AKAP13Q12802 2813 aa13.66□□□□□ -0.22
SOCS3-201ENST00000330871 POM121L12Q8N7R1 296 aa13.66□□□□□ -0.22
SOCS3-201ENST00000330871 EEF1AKMT3Q96AZ1 226 aa13.66□□□□□ -0.22
SOCS3-201ENST00000330871 A0A087WWL8 130 aa13.66□□□□□ -0.22
SOCS3-201ENST00000330871 NDUFA7O95182 113 aa13.66□□□□□ -0.22
SOCS3-201ENST00000330871 Q8N6K4 173 aa13.66□□□□□ -0.22
SOCS3-201ENST00000330871 LINC01560Q8TB33 94 aa13.66□□□□□ -0.22
SOCS3-201ENST00000330871 METTL26Q96S19 204 aa13.66□□□□□ -0.22
SOCS3-201ENST00000330871 ZNF256Q9Y2P7 627 aaPredicted RBP13.66□□□□□ -0.22
SOCS3-201ENST00000330871 A0A0J9YXY3 114 aa13.65□□□□□ -0.22
SOCS3-201ENST00000330871 F5H697 171 aa13.65□□□□□ -0.22
SOCS3-201ENST00000330871 HERVK_113P63121 156 aa13.65□□□□□ -0.22
SOCS3-201ENST00000330871 ZFAND2AQ8N6M9 145 aa13.65□□□□□ -0.22
SOCS3-201ENST00000330871 TIMM17AQ99595 171 aa13.65□□□□□ -0.22
SOCS3-201ENST00000330871 ACACAQ13085 2346 aa13.65□□□□□ -0.22
SOCS3-201ENST00000330871 NPFFO15130 113 aa13.65□□□□□ -0.22
SOCS3-201ENST00000330871 ECSCRQ19T08 205 aa13.65□□□□□ -0.22
SOCS3-201ENST00000330871 TRAV8-3A0A0A6YYJ7 113 aa13.64□□□□□ -0.23
SOCS3-201ENST00000330871 H3BT86 120 aa13.64□□□□□ -0.23
SOCS3-201ENST00000330871 RNASE4P34096 147 aaKnown RBP13.64□□□□□ -0.23
SOCS3-201ENST00000330871 POLR2KP53803 58 aaKnown RBP13.64□□□□□ -0.23
SOCS3-201ENST00000330871 CUBNO60494 3623 aa13.64□□□□□ -0.23
SOCS3-201ENST00000330871 ANKRD11Q6UB99 2663 aaPredicted RBP13.64□□□□□ -0.23
SOCS3-201ENST00000330871 IGHV7-81A0A0B4J1V7 117 aa13.64□□□□□ -0.23
SOCS3-201ENST00000330871 FAM240AA0A1B0GVK7 77 aa13.64□□□□□ -0.23
SOCS3-201ENST00000330871 SDHAF1A6NFY7 115 aa13.64□□□□□ -0.23
SOCS3-201ENST00000330871 RNASE3P12724 160 aaKnown RBP13.64□□□□□ -0.23
SOCS3-201ENST00000330871 C3orf22Q8N5N4 141 aa13.64□□□□□ -0.23
SOCS3-201ENST00000330871 TRAV21A0A0B4J279 112 aa13.63□□□□□ -0.23
SOCS3-201ENST00000330871 LY6HO94772 140 aa13.63□□□□□ -0.23
SOCS3-201ENST00000330871 PPP1R17O96001 155 aa13.63□□□□□ -0.23
SOCS3-201ENST00000330871 SUMO4Q6EEV6 95 aa13.63□□□□□ -0.23
SOCS3-201ENST00000330871 VMO1Q7Z5L0 202 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 258.5 ms