RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SMKR1H3BMG3 65 aa10.88□□□□□ -0.67
PRPF3-201ENST00000324862 WDR73Q6P4I2 378 aa10.88□□□□□ -0.67
PRPF3-201ENST00000324862 ZNF479Q96JC4 524 aa10.88□□□□□ -0.67
PRPF3-201ENST00000324862 SPATA25Q9BR10 227 aa10.88□□□□□ -0.67
PRPF3-201ENST00000324862 GNB1LQ9BYB4 327 aa10.88□□□□□ -0.67
PRPF3-201ENST00000324862 A0A0J9YWU9 116 aa10.87□□□□□ -0.67
PRPF3-201ENST00000324862 MGPP08493 103 aa10.87□□□□□ -0.67
PRPF3-201ENST00000324862 LINC00315P59091 139 aa10.87□□□□□ -0.67
PRPF3-201ENST00000324862 CFAP126Q5VTH2 177 aa10.87□□□□□ -0.67
PRPF3-201ENST00000324862 AP1S3Q96PC3 154 aa10.87□□□□□ -0.67
PRPF3-201ENST00000324862 TMEM191AQ9H0A3 160 aa10.87□□□□□ -0.67
PRPF3-201ENST00000324862 DKK2Q9UBU2 259 aa10.87□□□□□ -0.67
PRPF3-201ENST00000324862 NCR2O95944 276 aa10.87□□□□□ -0.67
PRPF3-201ENST00000324862 GATA1P15976 413 aaPredicted RBP10.87□□□□□ -0.67
PRPF3-201ENST00000324862 STAB2Q8WWQ8 2551 aa10.86□□□□□ -0.67
PRPF3-201ENST00000324862 TRGV2A0A075B6R0 118 aa10.86□□□□□ -0.67
PRPF3-201ENST00000324862 RAB4AP20338 218 aa10.86□□□□□ -0.67
PRPF3-201ENST00000324862 FAM104BQ5XKR9 115 aa10.86□□□□□ -0.67
PRPF3-201ENST00000324862 Q6ZSN1 163 aa10.86□□□□□ -0.67
PRPF3-201ENST00000324862 PHOX2AO14813 284 aa10.86□□□□□ -0.67
PRPF3-201ENST00000324862 RASL11AQ6T310 242 aa10.86□□□□□ -0.67
PRPF3-201ENST00000324862 B9D2Q9BPU9 175 aa10.86□□□□□ -0.67
PRPF3-201ENST00000324862 Q9UF83 564 aa10.86□□□□□ -0.67
PRPF3-201ENST00000324862 APCSP02743 223 aa10.85□□□□□ -0.67
PRPF3-201ENST00000324862 TRGC1P0CF51 173 aa10.85□□□□□ -0.67
PRPF3-201ENST00000324862 MRPL51Q4U2R6 128 aaKnown RBP10.85□□□□□ -0.67
PRPF3-201ENST00000324862 GATD1Q8NB37 220 aa10.85□□□□□ -0.67
PRPF3-201ENST00000324862 A0A1B0GW15 77 aa10.85□□□□□ -0.67
PRPF3-201ENST00000324862 HLA-DQA1P01909 254 aa10.85□□□□□ -0.67
PRPF3-201ENST00000324862 LGALS9BQ3B8N2 356 aa10.85□□□□□ -0.67
PRPF3-201ENST00000324862 NACAE9PAV3 2078 aa10.85□□□□□ -0.67
PRPF3-201ENST00000324862 UFSP1Q6NVU6 142 aa10.84□□□□□ -0.67
PRPF3-201ENST00000324862 DPH3P1Q9H4G8 78 aa10.84□□□□□ -0.67
PRPF3-201ENST00000324862 F5H697 171 aa10.84□□□□□ -0.67
PRPF3-201ENST00000324862 SMIM17P0DL12 118 aa10.84□□□□□ -0.67
PRPF3-201ENST00000324862 OR4C5Q8NGB2 326 aa10.84□□□□□ -0.67
PRPF3-201ENST00000324862 D6R8Y8 96 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 RS1O15537 224 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 S100A8P05109 93 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 P0DMU3 169 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 FAM231AP0DMU4 169 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 FAM231CP0DMU5 169 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 ZNF56Q15929 161 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 SMIM15Q7Z3B0 74 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 A8MWV9 139 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 LINC00612Q8N6U2 182 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 PTH2Q96A98 100 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 ZMAT4Q9H898 229 aa10.83□□□□□ -0.68
PRPF3-201ENST00000324862 TMA7Q9Y2S6 64 aaKnown RBP10.83□□□□□ -0.68
PRPF3-201ENST00000324862 SUMO4Q6EEV6 95 aa10.82□□□□□ -0.68
PRPF3-201ENST00000324862 MT-ND6P03923 174 aa10.82□□□□□ -0.68
PRPF3-201ENST00000324862 RPL39LQ96EH5 51 aaKnown RBP10.82□□□□□ -0.68
PRPF3-201ENST00000324862 LYRM9A8MSI8 78 aa10.81□□□□□ -0.68
PRPF3-201ENST00000324862 SPART-AS1P0CW21 52 aa10.81□□□□□ -0.68
PRPF3-201ENST00000324862 SRIP30626 198 aa10.81□□□□□ -0.68
PRPF3-201ENST00000324862 DEFB104AQ8WTQ1 72 aa10.81□□□□□ -0.68
PRPF3-201ENST00000324862 HOXA5P20719 270 aa10.8□□□□□ -0.68
PRPF3-201ENST00000324862 NANOS2P60321 138 aaKnown RBP10.8□□□□□ -0.68
PRPF3-201ENST00000324862 DAD1P61803 113 aa10.8□□□□□ -0.68
PRPF3-201ENST00000324862 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
PRPF3-201ENST00000324862 TRAV4A0A0B4J268 109 aa10.8□□□□□ -0.68
PRPF3-201ENST00000324862 CKS2P33552 79 aa10.8□□□□□ -0.68
PRPF3-201ENST00000324862 COX19Q49B96 90 aa10.8□□□□□ -0.68
PRPF3-201ENST00000324862 HTN3P15516 51 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 IQCJQ1A5X6 159 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 PIK3CD-AS1Q5SR53 167 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST1H2BKO60814 126 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 NPYP01303 97 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST1H2BJP06899 126 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST1H2BOP23527 126 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST1H2BBP33778 126 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST1H2BDP58876 126 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST1H2BCP62807 126 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST2H2BEQ16778 126 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST1H2BHQ93079 126 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST1H2BNQ99877 126 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 HIST1H2BMQ99879 126 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 ALKBH7Q9BT30 221 aaPredicted RBP10.79□□□□□ -0.68
PRPF3-201ENST00000324862 TGP01266 2768 aa10.79□□□□□ -0.68
PRPF3-201ENST00000324862 FHL2Q14192 279 aa10.78□□□□□ -0.68
PRPF3-201ENST00000324862 Q6ZTC4 211 aa10.78□□□□□ -0.68
PRPF3-201ENST00000324862 M0QY20 66 aa10.78□□□□□ -0.68
PRPF3-201ENST00000324862 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.68
PRPF3-201ENST00000324862 ORMDL3Q8N138 153 aa10.77□□□□□ -0.68
PRPF3-201ENST00000324862 NRACQ8N912 160 aa10.77□□□□□ -0.68
PRPF3-201ENST00000324862 C1orf196B1AJZ1 125 aa10.77□□□□□ -0.69
PRPF3-201ENST00000324862 SLC25A29Q8N8R3 303 aa10.77□□□□□ -0.69
PRPF3-201ENST00000324862 PRELID3AQ96N28 172 aa10.77□□□□□ -0.69
PRPF3-201ENST00000324862 U3KQK5 164 aa10.77□□□□□ -0.69
PRPF3-201ENST00000324862 TRGV4A0A0C4DH28 118 aa10.76□□□□□ -0.69
PRPF3-201ENST00000324862 LOC389332A0A1B0GUA5 103 aa10.76□□□□□ -0.69
PRPF3-201ENST00000324862 C11orf45Q8TAV5 145 aa10.76□□□□□ -0.69
PRPF3-201ENST00000324862 TNFRSF6BO95407 300 aa10.76□□□□□ -0.69
PRPF3-201ENST00000324862 ZFP2Q6ZN57 461 aa10.76□□□□□ -0.69
PRPF3-201ENST00000324862 NEGR1Q7Z3B1 354 aa10.76□□□□□ -0.69
PRPF3-201ENST00000324862 NDUFAF3Q9BU61 184 aa10.76□□□□□ -0.69
PRPF3-201ENST00000324862 C18orf15Q96N68 181 aa10.75□□□□□ -0.69
PRPF3-201ENST00000324862 CSMD3Q7Z407 3707 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms