RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 SRSF1Q07955 248 aaKnown RBP eCLIP9.19□□□□□ -0.94
NLRC3-201ENST00000324659 GAGE4Q13068 117 aa9.19□□□□□ -0.94
NLRC3-201ENST00000324659 TEN1Q86WV5 123 aa9.19□□□□□ -0.94
NLRC3-201ENST00000324659 SCGB3A1Q96QR1 104 aa9.19□□□□□ -0.94
NLRC3-201ENST00000324659 SRD5A1P18405 259 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 RAX2Q96IS3 184 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 PSMG3-AS1Q96PY0 264 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 A0A087WX48 190 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 NPFFO15130 113 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 ANKRD29Q8N6D5 301 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 EEF1AKMT3Q96AZ1 226 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 C20orf173Q96LM9 149 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 IGHV4-61A0A0C4DH41 118 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 IGHV4-39P01824 125 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 RPL32P62910 135 aaKnown RBP9.18□□□□□ -0.94
NLRC3-201ENST00000324659 C11orf71Q6IPW1 123 aa9.18□□□□□ -0.94
NLRC3-201ENST00000324659 BEX4Q9NWD9 120 aaPredicted RBP9.18□□□□□ -0.94
NLRC3-201ENST00000324659 TRBV12-3P01733 135 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 TAL2Q16559 108 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 TRBV7-3A0A075B6L6 115 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 C9JAW5 83 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 TCL1BO95988 128 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 SLC25A16P16260 332 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 PSMG4Q5JS54 123 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 DUX5Q96PT3 197 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 TRAV4A0A0B4J268 109 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 MINOS1Q5TGZ0 78 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 SMIM2Q9BVW6 85 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 PHLDA3Q9Y5J5 127 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 MINOS1-NBL1R4GNA1 71 aa9.17□□□□□ -0.94
NLRC3-201ENST00000324659 H3BUX3 64 aa9.16□□□□□ -0.94
NLRC3-201ENST00000324659 RNASE4P34096 147 aaKnown RBP9.16□□□□□ -0.94
NLRC3-201ENST00000324659 SRSF2Q01130 221 aaKnown RBP9.16□□□□□ -0.94
NLRC3-201ENST00000324659 UNQ9165/PRO28630Q6UXU0 137 aa9.16□□□□□ -0.94
NLRC3-201ENST00000324659 PRADC1Q9BSG0 188 aa9.16□□□□□ -0.94
NLRC3-201ENST00000324659 PIMREGQ9BSJ6 248 aa9.16□□□□□ -0.94
NLRC3-201ENST00000324659 EBI3Q14213 229 aa9.16□□□□□ -0.94
NLRC3-201ENST00000324659 PLEKHB2Q96CS7 222 aa9.16□□□□□ -0.94
NLRC3-201ENST00000324659 AJUBAQ96IF1 538 aa9.16□□□□□ -0.94
NLRC3-201ENST00000324659 SIRPDQ9H106 197 aa9.16□□□□□ -0.94
NLRC3-201ENST00000324659 PRRC2AP48634 2157 aaKnown RBP9.15□□□□□ -0.94
NLRC3-201ENST00000324659 RBAKDNA6NC62 111 aa9.15□□□□□ -0.94
NLRC3-201ENST00000324659 LGALS1P09382 135 aaKnown RBP9.15□□□□□ -0.94
NLRC3-201ENST00000324659 LINC01546A6NGU7 62 aa9.15□□□□□ -0.94
NLRC3-201ENST00000324659 GNRH2O43555 120 aa9.15□□□□□ -0.94
NLRC3-201ENST00000324659 UBE2E1P51965 193 aa9.15□□□□□ -0.94
NLRC3-201ENST00000324659 Q1RN00 199 aa9.15□□□□□ -0.94
NLRC3-201ENST00000324659 F8VRH5 84 aa9.15□□□□□ -0.95
NLRC3-201ENST00000324659 H7C1H1 209 aa9.15□□□□□ -0.95
NLRC3-201ENST00000324659 CRLF1O75462 422 aa9.15□□□□□ -0.95
NLRC3-201ENST00000324659 IGHV4-38-2P0DP08 117 aa9.15□□□□□ -0.95
NLRC3-201ENST00000324659 NDUFV3P56181 108 aaKnown RBP9.15□□□□□ -0.95
NLRC3-201ENST00000324659 SUMO2P61956 95 aaKnown RBP9.15□□□□□ -0.95
NLRC3-201ENST00000324659 LMO4P61968 165 aa9.15□□□□□ -0.95
NLRC3-201ENST00000324659 FAM159AQ6UWV7 190 aa9.15□□□□□ -0.95
NLRC3-201ENST00000324659 PIFOQ8TCI5 191 aa9.15□□□□□ -0.95
NLRC3-201ENST00000324659 PLNP26678 52 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 ATP6V0E2Q8NHE4 81 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 RASL10AQ92737 203 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 ZANQ9Y493 2812 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 CENPVL3A0A0U1RRI6 287 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 OOSP1A8MZH6 123 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 TMEM262E9PQX1 116 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 KHDC1LQ5JSQ8 128 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 IGHV4-30-2A0A087WSY4 118 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 NHLRC4P0CG21 123 aaPredicted RBP9.14□□□□□ -0.95
NLRC3-201ENST00000324659 IFITM1P13164 125 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 ID1P41134 155 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 LYRM7Q5U5X0 104 aa9.14□□□□□ -0.95
NLRC3-201ENST00000324659 C2orf66Q6UXQ4 117 aa9.13□□□□□ -0.95
NLRC3-201ENST00000324659 C9orf47Q6ZRZ4 202 aa9.13□□□□□ -0.95
NLRC3-201ENST00000324659 TRPT1Q86TN4 253 aaKnown RBP9.13□□□□□ -0.95
NLRC3-201ENST00000324659 IGKV3-20P01619 116 aa9.13□□□□□ -0.95
NLRC3-201ENST00000324659 OR10J6PQ8NGY7 276 aa9.13□□□□□ -0.95
NLRC3-201ENST00000324659 BLCAPP62952 87 aa9.12□□□□□ -0.95
NLRC3-201ENST00000324659 TRAV41A0A0B4J266 112 aa9.12□□□□□ -0.95
NLRC3-201ENST00000324659 SLC25A20O43772 301 aa9.12□□□□□ -0.95
NLRC3-201ENST00000324659 ASIPP42127 132 aa9.12□□□□□ -0.95
NLRC3-201ENST00000324659 MEIG1Q5JSS6 88 aa9.12□□□□□ -0.95
NLRC3-201ENST00000324659 NTN5Q8WTR8 489 aaPredicted RBP9.12□□□□□ -0.95
NLRC3-201ENST00000324659 JPT2Q9H910 190 aa9.12□□□□□ -0.95
NLRC3-201ENST00000324659 TRBV7-1A0A0A6YYK4 115 aa9.12□□□□□ -0.95
NLRC3-201ENST00000324659 CRIP2P52943 208 aaPredicted RBP9.11□□□□□ -0.95
NLRC3-201ENST00000324659 BAALCQ8WXS3 180 aa9.11□□□□□ -0.95
NLRC3-201ENST00000324659 F5H697 171 aa9.11□□□□□ -0.95
NLRC3-201ENST00000324659 DUSP14O95147 198 aaKnown RBP9.11□□□□□ -0.95
NLRC3-201ENST00000324659 ORMDL2Q53FV1 153 aa9.11□□□□□ -0.95
NLRC3-201ENST00000324659 ZFAND2AQ8N6M9 145 aa9.11□□□□□ -0.95
NLRC3-201ENST00000324659 C5orf56Q8N8D9 126 aa9.11□□□□□ -0.95
NLRC3-201ENST00000324659 A0A087WWL8 130 aa9.11□□□□□ -0.95
NLRC3-201ENST00000324659 DPH3P1Q9H4G8 78 aa9.11□□□□□ -0.95
NLRC3-201ENST00000324659 TRAV21A0A0B4J279 112 aa9.1□□□□□ -0.95
NLRC3-201ENST00000324659 FAM74A4Q5TZK3 123 aa9.1□□□□□ -0.95
NLRC3-201ENST00000324659 PRORYQ9H606 182 aa9.1□□□□□ -0.95
NLRC3-201ENST00000324659 EDN2P20800 178 aa9.1□□□□□ -0.95
NLRC3-201ENST00000324659 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
NLRC3-201ENST00000324659 MUC4Q99102 2169 aa9.1□□□□□ -0.95
NLRC3-201ENST00000324659 FASNP49327 2511 aaKnown RBP9.1□□□□□ -0.95
NLRC3-201ENST00000324659 NACAE9PAV3 2078 aa9.09□□□□□ -0.95
NLRC3-201ENST00000324659 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms