RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 ZNF688P0C7X2 276 aa11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 DEFB113Q30KQ7 82 aa11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 MAPK1IP1LQ8NDC0 245 aa11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 SCGB3A1Q96QR1 104 aa11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 TRAV12-3A0A0B4J271 114 aa11.75□□□□□ -0.53
SMARCD2-202ENST00000323347 SYNJ2BPP57105 145 aa11.75□□□□□ -0.53
SMARCD2-202ENST00000323347 GTSCR1Q86UQ5 136 aa11.75□□□□□ -0.53
SMARCD2-202ENST00000323347 TMEM160Q9NX00 188 aa11.75□□□□□ -0.53
SMARCD2-202ENST00000323347 CRYBG3Q68DQ2 2970 aa11.75□□□□□ -0.53
SMARCD2-202ENST00000323347 SPG11Q96JI7 2443 aa11.75□□□□□ -0.53
SMARCD2-202ENST00000323347 TRBV6-5A0A0K0K1A5 114 aa11.74□□□□□ -0.53
SMARCD2-202ENST00000323347 HOXD3P31249 432 aaPredicted RBP11.74□□□□□ -0.53
SMARCD2-202ENST00000323347 FOXI2Q6ZQN5 318 aa11.74□□□□□ -0.53
SMARCD2-202ENST00000323347 GAGE10A6NGK3 116 aa11.74□□□□□ -0.53
SMARCD2-202ENST00000323347 C9orf118A6NHY6 69 aa11.74□□□□□ -0.53
SMARCD2-202ENST00000323347 HOXA3O43365 443 aaPredicted RBP11.74□□□□□ -0.53
SMARCD2-202ENST00000323347 CD7P09564 240 aa11.74□□□□□ -0.53
SMARCD2-202ENST00000323347 KRTAP10-9P60411 292 aa11.74□□□□□ -0.53
SMARCD2-202ENST00000323347 C2orf66Q6UXQ4 117 aa11.74□□□□□ -0.53
SMARCD2-202ENST00000323347 ERASQ7Z444 233 aa11.74□□□□□ -0.53
SMARCD2-202ENST00000323347 TRAV8-6A0A0B4J262 113 aa11.73□□□□□ -0.53
SMARCD2-202ENST00000323347 A0A1B0GV72 72 aa11.73□□□□□ -0.53
SMARCD2-202ENST00000323347 A8MTW9 85 aa11.73□□□□□ -0.53
SMARCD2-202ENST00000323347 SAP30O75446 220 aa11.73□□□□□ -0.53
SMARCD2-202ENST00000323347 TCTAP57738 103 aa11.73□□□□□ -0.53
SMARCD2-202ENST00000323347 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
SMARCD2-202ENST00000323347 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
SMARCD2-202ENST00000323347 TRAV2A0A0B4J234 112 aa11.72□□□□□ -0.53
SMARCD2-202ENST00000323347 SUMO4Q6EEV6 95 aa11.72□□□□□ -0.53
SMARCD2-202ENST00000323347 UFSP1Q6NVU6 142 aa11.72□□□□□ -0.53
SMARCD2-202ENST00000323347 MUC4Q99102 2169 aa11.72□□□□□ -0.53
SMARCD2-202ENST00000323347 FBN2P35556 2912 aa11.72□□□□□ -0.53
SMARCD2-202ENST00000323347 IGHV1OR15-1A0A075B7D0 117 aa11.72□□□□□ -0.53
SMARCD2-202ENST00000323347 BAALCQ8WXS3 180 aa11.72□□□□□ -0.53
SMARCD2-202ENST00000323347 LINC01619G3V211 115 aa11.71□□□□□ -0.53
SMARCD2-202ENST00000323347 VCYO14598 125 aa11.71□□□□□ -0.53
SMARCD2-202ENST00000323347 TAL2Q16559 108 aa11.71□□□□□ -0.53
SMARCD2-202ENST00000323347 Q5PR19 223 aa11.71□□□□□ -0.53
SMARCD2-202ENST00000323347 SYT8Q8NBV8 401 aa11.71□□□□□ -0.53
SMARCD2-202ENST00000323347 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
SMARCD2-202ENST00000323347 TM2D2Q9BX73 214 aa11.71□□□□□ -0.53
SMARCD2-202ENST00000323347 JPT2Q9H910 190 aa11.71□□□□□ -0.53
SMARCD2-202ENST00000323347 CR1P17927 2039 aa11.71□□□□□ -0.54
SMARCD2-202ENST00000323347 NEGR1Q7Z3B1 354 aa11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 WFDC12Q8WWY7 111 aa11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 CLUHP3Q96NS8 147 aa11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 PRRC2AP48634 2157 aaKnown RBP11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 CELSR2Q9HCU4 2923 aa11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 TRBV27A0A0K0K1C4 114 aa11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 TCTEX1D4Q5JR98 221 aa11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 Q8N1Y9 231 aa11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 TTTY13Q9BZ97 58 aa11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 MDFICQ9P1T7 246 aa11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 ZNF256Q9Y2P7 627 aaPredicted RBP11.7□□□□□ -0.54
SMARCD2-202ENST00000323347 IGIPA6NJ69 53 aa11.69□□□□□ -0.54
SMARCD2-202ENST00000323347 CRYGDP07320 174 aa11.69□□□□□ -0.54
SMARCD2-202ENST00000323347 ZFP2Q6ZN57 461 aa11.69□□□□□ -0.54
SMARCD2-202ENST00000323347 KRTAP1-3Q8IUG1 177 aa11.69□□□□□ -0.54
SMARCD2-202ENST00000323347 MAPKAPK5-AS1Q8N8E1 139 aa11.69□□□□□ -0.54
SMARCD2-202ENST00000323347 CYSLTR1Q9Y271 337 aa11.69□□□□□ -0.54
SMARCD2-202ENST00000323347 PRSS29PA6NIE9 313 aa11.68□□□□□ -0.54
SMARCD2-202ENST00000323347 TMEM86BQ8N661 226 aa11.68□□□□□ -0.54
SMARCD2-202ENST00000323347 TRAV12-2A0A075B6T6 113 aa11.68□□□□□ -0.54
SMARCD2-202ENST00000323347 SPINK13Q1W4C9 94 aa11.68□□□□□ -0.54
SMARCD2-202ENST00000323347 TMEM141Q96I45 108 aa11.68□□□□□ -0.54
SMARCD2-202ENST00000323347 POLQO75417 2590 aa11.68□□□□□ -0.54
SMARCD2-202ENST00000323347 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
SMARCD2-202ENST00000323347 M0QY20 66 aa11.67□□□□□ -0.54
SMARCD2-202ENST00000323347 DUX5Q96PT3 197 aa11.67□□□□□ -0.54
SMARCD2-202ENST00000323347 TIMM17AQ99595 171 aa11.67□□□□□ -0.54
SMARCD2-202ENST00000323347 EDA2RQ9HAV5 297 aa11.67□□□□□ -0.54
SMARCD2-202ENST00000323347 CSPG4Q6UVK1 2322 aa11.67□□□□□ -0.54
SMARCD2-202ENST00000323347 ITPR3Q14573 2671 aa11.67□□□□□ -0.54
SMARCD2-202ENST00000323347 A0A087WWL8 130 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 E9PLD3 99 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 K7EP34 96 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 TSHBP01222 138 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 CEND1Q8N111 149 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 OR5A1Q8NGJ0 315 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 C4orf3Q8WVX3 66 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 Q96MF0 132 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 JMJD8Q96S16 334 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 KIR2DL4Q99706 377 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 MAP1AP78559 2803 aaPredicted RBP11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 SDHAF1A6NFY7 115 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 IGKV3-20P01619 116 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 SMIM13P0DJ93 91 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 FXYD2P54710 66 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 SCGB2A2Q13296 93 aa11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 MORN3Q6PF18 240 aaPredicted RBP11.66□□□□□ -0.54
SMARCD2-202ENST00000323347 SLURP1P55000 103 aa11.65□□□□□ -0.54
SMARCD2-202ENST00000323347 KRTAP21-3Q3LHN1 58 aa11.65□□□□□ -0.54
SMARCD2-202ENST00000323347 PAPPA-AS1Q5QFB9 102 aa11.65□□□□□ -0.54
SMARCD2-202ENST00000323347 PHLDA1Q8WV24 401 aaPredicted RBP11.65□□□□□ -0.54
SMARCD2-202ENST00000323347 F5H697 171 aa11.64□□□□□ -0.55
SMARCD2-202ENST00000323347 GCSHP23434 173 aa11.64□□□□□ -0.55
SMARCD2-202ENST00000323347 RHOHQ15669 191 aa11.64□□□□□ -0.55
SMARCD2-202ENST00000323347 TRPT1Q86TN4 253 aaKnown RBP11.64□□□□□ -0.55
SMARCD2-202ENST00000323347 TEX29Q8N6K0 151 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms