RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 DYNLRB2Q8TF09 96 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 A0A087WWL8 130 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 PRSS1P07477 247 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 SUMO2P61956 95 aaKnown RBP5.61□□□□□ -1.51
IFT88-201ENST00000319980 NUTF2P61970 127 aaKnown RBP5.61□□□□□ -1.51
IFT88-201ENST00000319980 LGALS9BQ3B8N2 356 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 LGALS9CQ6DKI2 356 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 AMTNQ6UX39 209 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 MRPL52Q86TS9 123 aaKnown RBP5.61□□□□□ -1.51
IFT88-201ENST00000319980 DEFB125Q8N687 156 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 J3QL48 77 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 CD28P10747 220 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 STPG4Q8N801 248 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 SMIM2Q9BVW6 85 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 DKK2Q9UBU2 259 aa5.61□□□□□ -1.51
IFT88-201ENST00000319980 IGHV1OR15-1A0A075B7D0 117 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 IGHV3-16A0A0C4DH30 117 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 F5H697 171 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 HINT1P49773 126 aaPredicted RBP5.6□□□□□ -1.51
IFT88-201ENST00000319980 CD300EQ496F6 205 aaPredicted RBP5.6□□□□□ -1.51
IFT88-201ENST00000319980 FAM74A4Q5TZK3 123 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 SLC25A34Q6PIV7 304 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 MRPS16Q9Y3D3 137 aaKnown RBP5.6□□□□□ -1.51
IFT88-201ENST00000319980 CHTOPQ9Y3Y2 248 aaKnown RBP5.6□□□□□ -1.51
IFT88-201ENST00000319980 HIVEP2P31629 2446 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 NXPH4O95158 308 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 NUDT3O95989 172 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 DEFB114Q30KQ6 69 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 LINC01006Q8NI28 216 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 SMR3AQ99954 134 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 KIF25-AS1Q9Y6Z4 181 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 MUC4Q99102 2169 aa5.6□□□□□ -1.51
IFT88-201ENST00000319980 H3BMM0 161 aa5.59□□□□□ -1.51
IFT88-201ENST00000319980 CCL24O00175 119 aa5.59□□□□□ -1.51
IFT88-201ENST00000319980 LINC00315P59091 139 aa5.59□□□□□ -1.51
IFT88-201ENST00000319980 LINC00528Q8N1L1 170 aa5.59□□□□□ -1.51
IFT88-201ENST00000319980 C20orf78Q9BR46 151 aa5.59□□□□□ -1.51
IFT88-201ENST00000319980 HLA-DRB4P13762 266 aa5.59□□□□□ -1.51
IFT88-201ENST00000319980 DEFB104AQ8WTQ1 72 aa5.59□□□□□ -1.51
IFT88-201ENST00000319980 C9orf85Q96MD7 179 aa5.59□□□□□ -1.51
IFT88-201ENST00000319980 HLA-DRB4X5D2U9 266 aa5.59□□□□□ -1.51
IFT88-201ENST00000319980 CBY3A6NI87 242 aa5.59□□□□□ -1.52
IFT88-201ENST00000319980 RBMY1A1P0DJD3 496 aaKnown RBP5.59□□□□□ -1.52
IFT88-201ENST00000319980 RBMY1CP0DJD4 496 aa5.59□□□□□ -1.52
IFT88-201ENST00000319980 RBMY1FQ15415 496 aaKnown RBP5.59□□□□□ -1.52
IFT88-201ENST00000319980 CSTL1Q9H114 145 aa5.59□□□□□ -1.52
IFT88-201ENST00000319980 ATP5LO75964 103 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 PRM2P04554 102 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 RNASE1P07998 156 aaKnown RBP5.58□□□□□ -1.52
IFT88-201ENST00000319980 ZNF876PQ49A33 203 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 COL5A1-AS1Q5SY13 56 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 NEGR1Q7Z3B1 354 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 MAP6D1Q9H9H5 199 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 PPP1R17O96001 155 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 COX8AP10176 69 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 ORMDL2Q53FV1 153 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 SUMO4Q6EEV6 95 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 SYT8Q8NBV8 401 aa5.58□□□□□ -1.52
IFT88-201ENST00000319980 NIPBLQ6KC79 2804 aaeCLIP5.57□□□□□ -1.52
IFT88-201ENST00000319980 TRAV2A0A0B4J234 112 aa5.57□□□□□ -1.52
IFT88-201ENST00000319980 RBMY1BA6NDE4 496 aaKnown RBP5.57□□□□□ -1.52
IFT88-201ENST00000319980 RBMY1EA6NEQ0 496 aaKnown RBP5.57□□□□□ -1.52
IFT88-201ENST00000319980 RBMY1DP0C7P1 496 aaKnown RBP5.57□□□□□ -1.52
IFT88-201ENST00000319980 FHL3Q13643 280 aa5.57□□□□□ -1.52
IFT88-201ENST00000319980 MPV17L2Q567V2 206 aa5.57□□□□□ -1.52
IFT88-201ENST00000319980 ZNF418Q8TF45 676 aaPredicted RBP5.57□□□□□ -1.52
IFT88-201ENST00000319980 SPAG8Q99932 426 aaPredicted RBP5.57□□□□□ -1.52
IFT88-201ENST00000319980 ZNF256Q9Y2P7 627 aaPredicted RBP5.57□□□□□ -1.52
IFT88-201ENST00000319980 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.57□□□□□ -1.52
IFT88-201ENST00000319980 ZNF56Q15929 161 aa5.57□□□□□ -1.52
IFT88-201ENST00000319980 POM121L12Q8N7R1 296 aa5.57□□□□□ -1.52
IFT88-201ENST00000319980 LINC00469Q8N7U9 141 aa5.57□□□□□ -1.52
IFT88-201ENST00000319980 TSSC4Q9Y5U2 329 aaPredicted RBP5.57□□□□□ -1.52
IFT88-201ENST00000319980 TRGV11A0A075B6L2 103 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 CRYGDP07320 174 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 NMUP48645 174 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 SCGB2A2Q13296 93 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 SCGB3A1Q96QR1 104 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 HHLA3Q9XRX5 114 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 IGKCP01834 107 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 G0S2P27469 103 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 HILS1P60008 231 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 C2orf66Q6UXQ4 117 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 MRPL35Q9NZE8 188 aaKnown RBP5.56□□□□□ -1.52
IFT88-201ENST00000319980 SDHAF1A6NFY7 115 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 K7EMI3 77 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 ZNF25P17030 456 aaPredicted RBP5.56□□□□□ -1.52
IFT88-201ENST00000319980 TOMM6Q96B49 74 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 C16orf95Q9H693 158 aa5.56□□□□□ -1.52
IFT88-201ENST00000319980 NOTCH3Q9UM47 2321 aa5.55□□□□□ -1.52
IFT88-201ENST00000319980 A8MTW9 85 aa5.55□□□□□ -1.52
IFT88-201ENST00000319980 DPM2O94777 84 aa5.55□□□□□ -1.52
IFT88-201ENST00000319980 POLR2KP53803 58 aaKnown RBP5.55□□□□□ -1.52
IFT88-201ENST00000319980 ODF3L2Q3SX64 289 aa5.55□□□□□ -1.52
IFT88-201ENST00000319980 PCP2Q8IVA1 136 aa5.55□□□□□ -1.52
IFT88-201ENST00000319980 M0QY20 66 aa5.55□□□□□ -1.52
IFT88-201ENST00000319980 FGF6P10767 208 aa5.55□□□□□ -1.52
IFT88-201ENST00000319980 ZC2HC1BQ5TFG8 222 aa5.55□□□□□ -1.52
IFT88-201ENST00000319980 LINC01587Q99440 93 aa5.55□□□□□ -1.52
IFT88-201ENST00000319980 KIR2DL4Q99706 377 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms