RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 SPG11Q96JI7 2443 aa9.52□□□□□ -0.89
FARP1-201ENST00000319562 PTPRQQ9UMZ3 2332 aa9.52□□□□□ -0.89
FARP1-201ENST00000319562 IGLV3-9A0A075B6K5 115 aa9.52□□□□□ -0.89
FARP1-201ENST00000319562 COL4A1P02462 1669 aa9.52□□□□□ -0.89
FARP1-201ENST00000319562 E9PLD3 99 aa9.52□□□□□ -0.89
FARP1-201ENST00000319562 Q6ZUT4 128 aa9.52□□□□□ -0.89
FARP1-201ENST00000319562 FGF23Q9GZV9 251 aaPredicted RBP9.51□□□□□ -0.89
FARP1-201ENST00000319562 SP5Q6BEB4 398 aaPredicted RBP9.51□□□□□ -0.89
FARP1-201ENST00000319562 LECT2O14960 151 aa9.51□□□□□ -0.89
FARP1-201ENST00000319562 SPART-AS1P0CW21 52 aa9.51□□□□□ -0.89
FARP1-201ENST00000319562 TOMM6Q96B49 74 aa9.51□□□□□ -0.89
FARP1-201ENST00000319562 C17orf77Q96MU5 243 aa9.51□□□□□ -0.89
FARP1-201ENST00000319562 KAAG1Q9UBP8 84 aa9.51□□□□□ -0.89
FARP1-201ENST00000319562 FXYD2P54710 66 aa9.51□□□□□ -0.89
FARP1-201ENST00000319562 CASC2Q6XLA1 102 aa9.51□□□□□ -0.89
FARP1-201ENST00000319562 PRR15LQ9BU68 103 aa9.51□□□□□ -0.89
FARP1-201ENST00000319562 FAM240AA0A1B0GVK7 77 aa9.5□□□□□ -0.89
FARP1-201ENST00000319562 UPK3BQ9BT76 320 aa9.5□□□□□ -0.89
FARP1-201ENST00000319562 COL4A5P29400 1685 aa9.5□□□□□ -0.89
FARP1-201ENST00000319562 RNF183Q96D59 192 aa9.5□□□□□ -0.89
FARP1-201ENST00000319562 NUP210Q8TEM1 1887 aaPredicted RBP9.5□□□□□ -0.89
FARP1-201ENST00000319562 IGLV10-54A0A075B6I4 117 aa9.5□□□□□ -0.89
FARP1-201ENST00000319562 C11orf86A6NJI1 115 aa9.5□□□□□ -0.89
FARP1-201ENST00000319562 V9GYY9 64 aa9.5□□□□□ -0.89
FARP1-201ENST00000319562 ADAMTS9Q9P2N4 1935 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 UQCRQO14949 82 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 ANKRD39Q53RE8 183 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 TM2D2Q9BX73 214 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 VPREB3Q9UKI3 123 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 UNQ6494/PRO21346Q6UXR6 183 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 Q6ZR03 302 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 C9orf66Q5T8R8 295 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 DSCAMO60469 2012 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 C1orf147Q96MC9 270 aaPredicted RBP9.49□□□□□ -0.89
FARP1-201ENST00000319562 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 NDUFC2-KCTD14E9PQ53 114 aa9.49□□□□□ -0.89
FARP1-201ENST00000319562 GATA1P15976 413 aaPredicted RBP9.49□□□□□ -0.89
FARP1-201ENST00000319562 FHL1Q13642 323 aa9.48□□□□□ -0.89
FARP1-201ENST00000319562 FAM110AQ9BQ89 295 aa9.48□□□□□ -0.89
FARP1-201ENST00000319562 PIFOQ8TCI5 191 aa9.48□□□□□ -0.89
FARP1-201ENST00000319562 NCR3O14931 201 aa9.48□□□□□ -0.89
FARP1-201ENST00000319562 Q8N1Y9 231 aa9.48□□□□□ -0.89
FARP1-201ENST00000319562 A0A0J9YXV3 536 aa9.48□□□□□ -0.89
FARP1-201ENST00000319562 RNASE8Q8TDE3 154 aaKnown RBP9.48□□□□□ -0.89
FARP1-201ENST00000319562 IGHV1-58A0A0C4DH39 117 aa9.48□□□□□ -0.89
FARP1-201ENST00000319562 HOXB4P17483 251 aaPredicted RBP9.48□□□□□ -0.89
FARP1-201ENST00000319562 CLEC2BQ92478 149 aa9.48□□□□□ -0.89
FARP1-201ENST00000319562 WI2-2373I1.2A0A1W2PRP0 233 aa9.48□□□□□ -0.89
FARP1-201ENST00000319562 BPY2O14599 106 aa9.48□□□□□ -0.89
FARP1-201ENST00000319562 NDUFV3P56181 108 aaKnown RBP9.47□□□□□ -0.89
FARP1-201ENST00000319562 TRAV23DV6A0A075B6W5 121 aa9.47□□□□□ -0.89
FARP1-201ENST00000319562 CDPF1Q6NVV7 123 aa9.47□□□□□ -0.89
FARP1-201ENST00000319562 MPLKIPQ8TAP9 179 aa9.47□□□□□ -0.89
FARP1-201ENST00000319562 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
FARP1-201ENST00000319562 ARTNQ5T4W7 220 aa9.47□□□□□ -0.89
FARP1-201ENST00000319562 MAPK1IP1LQ8NDC0 245 aa9.47□□□□□ -0.89
FARP1-201ENST00000319562 HHLA3Q9XRX5 114 aa9.47□□□□□ -0.89
FARP1-201ENST00000319562 IGLV1-44P01699 117 aa9.47□□□□□ -0.89
FARP1-201ENST00000319562 USP17L23D6RBM5 183 aa9.47□□□□□ -0.89
FARP1-201ENST00000319562 SPANXB1Q9NS25 103 aaPredicted RBP9.47□□□□□ -0.89
FARP1-201ENST00000319562 CSPG4Q6UVK1 2322 aa9.47□□□□□ -0.89
FARP1-201ENST00000319562 DAND5Q8N907 189 aa9.47□□□□□ -0.89
FARP1-201ENST00000319562 ZNF106Q9H2Y7 1883 aaKnown RBP9.46□□□□□ -0.89
FARP1-201ENST00000319562 FAM236DA0A1B0GTK5 79 aa9.46□□□□□ -0.9
FARP1-201ENST00000319562 FAM236CP0DP71 79 aa9.46□□□□□ -0.9
FARP1-201ENST00000319562 TDRG1Q3Y452 100 aa9.46□□□□□ -0.9
FARP1-201ENST00000319562 B9D2Q9BPU9 175 aa9.45□□□□□ -0.9
FARP1-201ENST00000319562 MED14OSP0DP75 135 aa9.45□□□□□ -0.9
FARP1-201ENST00000319562 ATP5EP2Q5VTU8 51 aa9.45□□□□□ -0.9
FARP1-201ENST00000319562 OTOGLQ3ZCN5 2332 aa9.45□□□□□ -0.9
FARP1-201ENST00000319562 KIAA1671Q9BY89 1806 aa9.45□□□□□ -0.9
FARP1-201ENST00000319562 C16orf54Q6UWD8 224 aa9.45□□□□□ -0.9
FARP1-201ENST00000319562 IGLV2-23P01705 113 aa9.45□□□□□ -0.9
FARP1-201ENST00000319562 COX7BP24311 80 aa9.45□□□□□ -0.9
FARP1-201ENST00000319562 K7ENP7 123 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 NDUFC1O43677 76 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 IGHV3-33P01772 117 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 IGHV3-30-3P0DP02 117 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 C3orf22Q8N5N4 141 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 IGFL3Q6UXB1 125 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 WISP1O95388 367 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 GP9P14770 177 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 NPBQ8NG41 125 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 SPAG11BQ08648 103 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 DIAPH2-AS1Q14236 149 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 MIR7-3HGQ8N6C7 128 aa9.44□□□□□ -0.9
FARP1-201ENST00000319562 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
FARP1-201ENST00000319562 RPL39P62891 51 aaKnown RBP9.43□□□□□ -0.9
FARP1-201ENST00000319562 KIAA1549LQ6ZVL6 1849 aa9.43□□□□□ -0.9
FARP1-201ENST00000319562 ALPK3Q96L96 1907 aa9.43□□□□□ -0.9
FARP1-201ENST00000319562 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
FARP1-201ENST00000319562 LINC00173Q6ZV60 143 aa9.43□□□□□ -0.9
FARP1-201ENST00000319562 NDUFA11Q86Y39 141 aa9.43□□□□□ -0.9
FARP1-201ENST00000319562 ODF1Q14990 250 aa9.43□□□□□ -0.9
FARP1-201ENST00000319562 TEX22C9J3V5 150 aa9.43□□□□□ -0.9
FARP1-201ENST00000319562 PCNX3Q9H6A9 2034 aa9.43□□□□□ -0.9
FARP1-201ENST00000319562 MIAQ16674 131 aa9.43□□□□□ -0.9
FARP1-201ENST00000319562 CTRLP40313 264 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms