RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 RASL10AQ92737 203 aa13.62□□□□□ -0.23
SHISA3-201ENST00000319234 CHAC1Q9BUX1 264 aa13.62□□□□□ -0.23
SHISA3-201ENST00000319234 FLNAP21333 2647 aaKnown RBP13.62□□□□□ -0.23
SHISA3-201ENST00000319234 GAGE12BA1L429 117 aa13.62□□□□□ -0.23
SHISA3-201ENST00000319234 J3KRW8 73 aa13.62□□□□□ -0.23
SHISA3-201ENST00000319234 KLHL30-AS1Q8NEE0 82 aa13.62□□□□□ -0.23
SHISA3-201ENST00000319234 TOMM6Q96B49 74 aa13.62□□□□□ -0.23
SHISA3-201ENST00000319234 PEMTQ9UBM1 199 aa13.62□□□□□ -0.23
SHISA3-201ENST00000319234 NXPH4O95158 308 aa13.61□□□□□ -0.23
SHISA3-201ENST00000319234 ZNF688P0C7X2 276 aa13.61□□□□□ -0.23
SHISA3-201ENST00000319234 RNASE4P34096 147 aaKnown RBP13.61□□□□□ -0.23
SHISA3-201ENST00000319234 POM121L12Q8N7R1 296 aa13.61□□□□□ -0.23
SHISA3-201ENST00000319234 TLN2Q9Y4G6 2542 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 TRBV25-1A0A075B6N4 114 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 H3BUT2 72 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 H7C1H1 209 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 K7EP34 96 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 OCIAD2Q56VL3 154 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 UNC79Q9P2D8 2635 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 F8VRH5 84 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 SMIM13P0DJ93 91 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 JMJD8Q96S16 334 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 C16orf95Q9H693 158 aa13.6□□□□□ -0.23
SHISA3-201ENST00000319234 TAL2Q16559 108 aa13.59□□□□□ -0.23
SHISA3-201ENST00000319234 ZNF418Q8TF45 676 aaPredicted RBP13.59□□□□□ -0.23
SHISA3-201ENST00000319234 DUX3Q96PT4 197 aa13.59□□□□□ -0.23
SHISA3-201ENST00000319234 KLLNB2CW77 178 aa13.58□□□□□ -0.24
SHISA3-201ENST00000319234 RNASE3P12724 160 aaKnown RBP13.58□□□□□ -0.24
SHISA3-201ENST00000319234 C14orf178Q8N769 122 aaPredicted RBP13.58□□□□□ -0.24
SHISA3-201ENST00000319234 SCGB3A1Q96QR1 104 aa13.58□□□□□ -0.24
SHISA3-201ENST00000319234 TM2D2Q9BX73 214 aa13.58□□□□□ -0.24
SHISA3-201ENST00000319234 SONP18583 2426 aaKnown RBP13.58□□□□□ -0.24
SHISA3-201ENST00000319234 A0A0J9YX75 114 aa13.58□□□□□ -0.24
SHISA3-201ENST00000319234 A0A1W2PPM0 123 aa13.58□□□□□ -0.24
SHISA3-201ENST00000319234 GCSHP23434 173 aa13.58□□□□□ -0.24
SHISA3-201ENST00000319234 RPL32P62910 135 aaKnown RBP13.58□□□□□ -0.24
SHISA3-201ENST00000319234 OR5A1Q8NGJ0 315 aa13.58□□□□□ -0.24
SHISA3-201ENST00000319234 ODF3Q96PU9 254 aa13.58□□□□□ -0.24
SHISA3-201ENST00000319234 ANK3Q12955 4377 aaKnown RBP13.58□□□□□ -0.24
SHISA3-201ENST00000319234 AKAP9Q99996 3911 aa13.57□□□□□ -0.24
SHISA3-201ENST00000319234 LINC01549A6NIU2 74 aa13.57□□□□□ -0.24
SHISA3-201ENST00000319234 DLX4Q92988 240 aaPredicted RBP13.57□□□□□ -0.24
SHISA3-201ENST00000319234 TTTY13Q9BZ97 58 aa13.57□□□□□ -0.24
SHISA3-201ENST00000319234 HILS1P60008 231 aa13.56□□□□□ -0.24
SHISA3-201ENST00000319234 ITPR2Q14571 2701 aa13.56□□□□□ -0.24
SHISA3-201ENST00000319234 K7ERU9 68 aa13.56□□□□□ -0.24
SHISA3-201ENST00000319234 GNRH2O43555 120 aa13.56□□□□□ -0.24
SHISA3-201ENST00000319234 MGPP08493 103 aa13.56□□□□□ -0.24
SHISA3-201ENST00000319234 FXYD2P54710 66 aa13.56□□□□□ -0.24
SHISA3-201ENST00000319234 CEND1Q8N111 149 aa13.56□□□□□ -0.24
SHISA3-201ENST00000319234 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
SHISA3-201ENST00000319234 LINC01006Q8NI28 216 aa13.56□□□□□ -0.24
SHISA3-201ENST00000319234 RPL39LQ96EH5 51 aaKnown RBP13.56□□□□□ -0.24
SHISA3-201ENST00000319234 SMR3AQ99954 134 aa13.56□□□□□ -0.24
SHISA3-201ENST00000319234 CHTOPQ9Y3Y2 248 aaKnown RBP13.56□□□□□ -0.24
SHISA3-201ENST00000319234 CD28P10747 220 aa13.55□□□□□ -0.24
SHISA3-201ENST00000319234 FABP2P12104 132 aa13.55□□□□□ -0.24
SHISA3-201ENST00000319234 HIST2H2BDQ6DRA6 164 aa13.55□□□□□ -0.24
SHISA3-201ENST00000319234 RAB37Q96AX2 223 aa13.55□□□□□ -0.24
SHISA3-201ENST00000319234 TRAV2A0A0B4J234 112 aa13.54□□□□□ -0.24
SHISA3-201ENST00000319234 DUSP14O95147 198 aaKnown RBP13.54□□□□□ -0.24
SHISA3-201ENST00000319234 FAM159AQ6UWV7 190 aa13.54□□□□□ -0.24
SHISA3-201ENST00000319234 KIF25-AS1Q9Y6Z4 181 aa13.54□□□□□ -0.24
SHISA3-201ENST00000319234 LY6G6DO95868 133 aa13.54□□□□□ -0.24
SHISA3-201ENST00000319234 PCP4P48539 62 aa13.54□□□□□ -0.24
SHISA3-201ENST00000319234 C2orf66Q6UXQ4 117 aa13.54□□□□□ -0.24
SHISA3-201ENST00000319234 FOXI2Q6ZQN5 318 aa13.54□□□□□ -0.24
SHISA3-201ENST00000319234 RAX2Q96IS3 184 aa13.54□□□□□ -0.24
SHISA3-201ENST00000319234 SAMD5Q5TGI4 173 aa13.53□□□□□ -0.24
SHISA3-201ENST00000319234 C11orf44Q8N8P7 122 aa13.53□□□□□ -0.24
SHISA3-201ENST00000319234 SPCS1Q9Y6A9 102 aa13.53□□□□□ -0.24
SHISA3-201ENST00000319234 MAPKAPK5-AS1Q8N8E1 139 aa13.52□□□□□ -0.24
SHISA3-201ENST00000319234 OR11H12B2RN74 326 aa13.52□□□□□ -0.25
SHISA3-201ENST00000319234 SPRY2O43597 315 aa13.52□□□□□ -0.25
SHISA3-201ENST00000319234 LINC00315P59091 139 aa13.52□□□□□ -0.25
SHISA3-201ENST00000319234 FHL3Q13643 280 aa13.52□□□□□ -0.25
SHISA3-201ENST00000319234 RNF151Q2KHN1 245 aa13.52□□□□□ -0.25
SHISA3-201ENST00000319234 OR11H2Q8NH07 326 aa13.52□□□□□ -0.25
SHISA3-201ENST00000319234 DYNLRB2Q8TF09 96 aa13.52□□□□□ -0.25
SHISA3-201ENST00000319234 PHLDA1Q8WV24 401 aaPredicted RBP13.52□□□□□ -0.25
SHISA3-201ENST00000319234 CSTL1Q9H114 145 aa13.52□□□□□ -0.25
SHISA3-201ENST00000319234 TSSC4Q9Y5U2 329 aaPredicted RBP13.52□□□□□ -0.25
SHISA3-201ENST00000319234 ACANP16112 2415 aa13.51□□□□□ -0.25
SHISA3-201ENST00000319234 A0A1W2PRX2 142 aa13.51□□□□□ -0.25
SHISA3-201ENST00000319234 BAALCQ8WXS3 180 aa13.51□□□□□ -0.25
SHISA3-201ENST00000319234 NDUFA7O95182 113 aa13.51□□□□□ -0.25
SHISA3-201ENST00000319234 DEFB114Q30KQ6 69 aa13.51□□□□□ -0.25
SHISA3-201ENST00000319234 TMEM61Q8N0U2 210 aa13.51□□□□□ -0.25
SHISA3-201ENST00000319234 CITED2Q99967 270 aaPredicted RBP13.51□□□□□ -0.25
SHISA3-201ENST00000319234 NAA38Q9BRA0 125 aaKnown RBP13.51□□□□□ -0.25
SHISA3-201ENST00000319234 CCL24O00175 119 aa13.5□□□□□ -0.25
SHISA3-201ENST00000319234 IGKV3-20P01619 116 aa13.5□□□□□ -0.25
SHISA3-201ENST00000319234 TRAV12-3A0A0B4J271 114 aa13.49□□□□□ -0.25
SHISA3-201ENST00000319234 MYMXA0A1B0GTQ4 84 aa13.49□□□□□ -0.25
SHISA3-201ENST00000319234 CYSLTR1Q9Y271 337 aa13.49□□□□□ -0.25
SHISA3-201ENST00000319234 MUC4Q99102 2169 aa13.49□□□□□ -0.25
SHISA3-201ENST00000319234 MYO9AB2RTY4 2548 aa13.49□□□□□ -0.25
SHISA3-201ENST00000319234 E9PLD3 99 aa13.49□□□□□ -0.25
SHISA3-201ENST00000319234 NHP2Q9NX24 153 aaKnown RBP13.49□□□□□ -0.25
SHISA3-201ENST00000319234 POLR2KP53803 58 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms