RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 IGHV3-38A0A0C4DH36 116 aa10.92□□□□□ -0.66
HDDC2-201ENST00000318787 MUC21A0A0G2JKD1 596 aa10.92□□□□□ -0.66
HDDC2-201ENST00000318787 MUC21A0A140T8X8 626 aa10.92□□□□□ -0.66
HDDC2-201ENST00000318787 CENPWQ5EE01 88 aa10.92□□□□□ -0.66
HDDC2-201ENST00000318787 DNLZQ5SXM8 178 aa10.92□□□□□ -0.66
HDDC2-201ENST00000318787 C14orf178Q8N769 122 aaPredicted RBP10.92□□□□□ -0.66
HDDC2-201ENST00000318787 RHODO00212 210 aa10.91□□□□□ -0.66
HDDC2-201ENST00000318787 IGHV3-30P01768 117 aa10.91□□□□□ -0.66
HDDC2-201ENST00000318787 IGHV3-33P01772 117 aa10.91□□□□□ -0.66
HDDC2-201ENST00000318787 IGHV3-30-3P0DP02 117 aa10.91□□□□□ -0.66
HDDC2-201ENST00000318787 IGHV3-30-5P0DP03 117 aa10.91□□□□□ -0.66
HDDC2-201ENST00000318787 MED14OSP0DP75 135 aa10.91□□□□□ -0.66
HDDC2-201ENST00000318787 MEF2BQ02080 365 aaPredicted RBP10.91□□□□□ -0.66
HDDC2-201ENST00000318787 PIK3CD-AS1Q5SR53 167 aa10.91□□□□□ -0.66
HDDC2-201ENST00000318787 C9orf62Q8N4C0 152 aa10.91□□□□□ -0.66
HDDC2-201ENST00000318787 MSRB1Q9NZV6 116 aa10.91□□□□□ -0.66
HDDC2-201ENST00000318787 RAB19A4D1S5 217 aa10.9□□□□□ -0.66
HDDC2-201ENST00000318787 DNAH10OSP0CZ25 163 aa10.9□□□□□ -0.66
HDDC2-201ENST00000318787 NFE4Q86UQ8 179 aa10.9□□□□□ -0.66
HDDC2-201ENST00000318787 OR10AG1Q8NH19 301 aa10.9□□□□□ -0.66
HDDC2-201ENST00000318787 SFRP2Q96HF1 295 aa10.9□□□□□ -0.66
HDDC2-201ENST00000318787 MLST8Q9BVC4 326 aa10.9□□□□□ -0.66
HDDC2-201ENST00000318787 TPPP3Q9BW30 176 aa10.9□□□□□ -0.66
HDDC2-201ENST00000318787 GTSF1LQ9H1H1 148 aa10.9□□□□□ -0.66
HDDC2-201ENST00000318787 MED9Q9NWA0 146 aa10.9□□□□□ -0.66
HDDC2-201ENST00000318787 Q9UF83 564 aa10.9□□□□□ -0.66
HDDC2-201ENST00000318787 BTF3P20290 206 aaKnown RBP10.9□□□□□ -0.67
HDDC2-201ENST00000318787 GNG4P50150 75 aa10.9□□□□□ -0.67
HDDC2-201ENST00000318787 ZNF56Q15929 161 aa10.9□□□□□ -0.67
HDDC2-201ENST00000318787 SPANXN1Q5VSR9 72 aa10.9□□□□□ -0.67
HDDC2-201ENST00000318787 ALKAL2Q6UX46 152 aa10.9□□□□□ -0.67
HDDC2-201ENST00000318787 C11orf52Q96A22 123 aa10.9□□□□□ -0.67
HDDC2-201ENST00000318787 DAZAP1Q96EP5 407 aaKnown RBP10.9□□□□□ -0.67
HDDC2-201ENST00000318787 SCRT2Q9NQ03 307 aa10.9□□□□□ -0.67
HDDC2-201ENST00000318787 EREGO14944 169 aa10.89□□□□□ -0.67
HDDC2-201ENST00000318787 PDE6DO43924 150 aa10.89□□□□□ -0.67
HDDC2-201ENST00000318787 BCL2P10415 239 aa10.89□□□□□ -0.67
HDDC2-201ENST00000318787 TIRAPP58753 221 aa10.89□□□□□ -0.67
HDDC2-201ENST00000318787 ERVFC1-1P60608 527 aa10.89□□□□□ -0.67
HDDC2-201ENST00000318787 LELP1Q5T871 98 aa10.89□□□□□ -0.67
HDDC2-201ENST00000318787 UFSP1Q6NVU6 142 aa10.89□□□□□ -0.67
HDDC2-201ENST00000318787 Q6ZRN7 208 aaPredicted RBP10.89□□□□□ -0.67
HDDC2-201ENST00000318787 C10orf126Q8N4M7 172 aa10.89□□□□□ -0.67
HDDC2-201ENST00000318787 Q9HAA7 133 aa10.89□□□□□ -0.67
HDDC2-201ENST00000318787 PCLOQ9Y6V0 5065 aa10.88□□□□□ -0.67
HDDC2-201ENST00000318787 FUSP35637 526 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDDC2-201ENST00000318787 NKX2-5P52952 324 aaPredicted RBP10.88□□□□□ -0.67
HDDC2-201ENST00000318787 VAX2Q9UIW0 290 aa10.88□□□□□ -0.67
HDDC2-201ENST00000318787 PSCAO43653 123 aa10.87□□□□□ -0.67
HDDC2-201ENST00000318787 GZMBP10144 247 aa10.87□□□□□ -0.67
HDDC2-201ENST00000318787 KRTAP10-2P60368 255 aa10.87□□□□□ -0.67
HDDC2-201ENST00000318787 OR2D3Q8NGH3 330 aa10.87□□□□□ -0.67
HDDC2-201ENST00000318787 A0A1B0GVG6 124 aa10.86□□□□□ -0.67
HDDC2-201ENST00000318787 F5H697 171 aa10.86□□□□□ -0.67
HDDC2-201ENST00000318787 K7EP13 123 aa10.86□□□□□ -0.67
HDDC2-201ENST00000318787 LINC01556Q5JQF7 62 aa10.86□□□□□ -0.67
HDDC2-201ENST00000318787 CXCL1P09341 107 aa10.85□□□□□ -0.67
HDDC2-201ENST00000318787 Q8N3U1 123 aa10.85□□□□□ -0.67
HDDC2-201ENST00000318787 RYR1P21817 5038 aa10.84□□□□□ -0.67
HDDC2-201ENST00000318787 RBFOX3A6NFN3 312 aa10.84□□□□□ -0.67
HDDC2-201ENST00000318787 SNAI2O43623 268 aa10.84□□□□□ -0.67
HDDC2-201ENST00000318787 IGLV2-8P01709 118 aa10.84□□□□□ -0.67
HDDC2-201ENST00000318787 P01737 135 aa10.84□□□□□ -0.67
HDDC2-201ENST00000318787 OR5AL1P0C617 328 aa10.84□□□□□ -0.67
HDDC2-201ENST00000318787 SMIM17P0DL12 118 aa10.84□□□□□ -0.67
HDDC2-201ENST00000318787 LINC00694P0DN24 101 aa10.84□□□□□ -0.67
HDDC2-201ENST00000318787 CEBPGP53567 150 aa10.84□□□□□ -0.67
HDDC2-201ENST00000318787 RPL36AP83881 106 aaKnown RBP10.84□□□□□ -0.67
HDDC2-201ENST00000318787 RPL36ALQ969Q0 106 aaKnown RBP10.84□□□□□ -0.67
HDDC2-201ENST00000318787 TAGLN2P37802 199 aaKnown RBP10.83□□□□□ -0.68
HDDC2-201ENST00000318787 BLOC1S1P78537 153 aa10.83□□□□□ -0.68
HDDC2-201ENST00000318787 FER1L6-AS1Q8NA97 138 aa10.83□□□□□ -0.68
HDDC2-201ENST00000318787 URGCP-MRPS24S4R325 110 aa10.83□□□□□ -0.68
HDDC2-201ENST00000318787 LRP1BQ9NZR2 4599 aa10.82□□□□□ -0.68
HDDC2-201ENST00000318787 TRBV20OR9-2A0A075B6H5 130 aa10.82□□□□□ -0.68
HDDC2-201ENST00000318787 MGPP08493 103 aa10.82□□□□□ -0.68
HDDC2-201ENST00000318787 RPS20P60866 119 aaKnown RBP10.82□□□□□ -0.68
HDDC2-201ENST00000318787 AP1S3Q96PC3 154 aa10.82□□□□□ -0.68
HDDC2-201ENST00000318787 A0A087WTM6 91 aa10.81□□□□□ -0.68
HDDC2-201ENST00000318787 A0A087WWC5 75 aa10.81□□□□□ -0.68
HDDC2-201ENST00000318787 XKRY2A2RUG3 117 aa10.81□□□□□ -0.68
HDDC2-201ENST00000318787 IBA57-AS1B1ANH7 110 aa10.81□□□□□ -0.68
HDDC2-201ENST00000318787 RAB4BP61018 213 aa10.81□□□□□ -0.68
HDDC2-201ENST00000318787 SMIM12Q96EX1 92 aa10.81□□□□□ -0.68
HDDC2-201ENST00000318787 SSBP4Q9BWG4 385 aaPredicted RBP10.81□□□□□ -0.68
HDDC2-201ENST00000318787 BIN3Q9NQY0 253 aa10.81□□□□□ -0.68
HDDC2-201ENST00000318787 TRBV7-3A0A075B6L6 115 aa10.8□□□□□ -0.68
HDDC2-201ENST00000318787 TRBV10-1A0A0K0K1A3 114 aa10.8□□□□□ -0.68
HDDC2-201ENST00000318787 C19orf71A6NCJ1 209 aa10.8□□□□□ -0.68
HDDC2-201ENST00000318787 DAZ4Q86SG3 579 aaKnown RBP10.8□□□□□ -0.68
HDDC2-201ENST00000318787 DAZ3Q9NR90 486 aaKnown RBP10.8□□□□□ -0.68
HDDC2-201ENST00000318787 HSPG2P98160 4391 aa10.8□□□□□ -0.68
HDDC2-201ENST00000318787 UBE2D3P61077 147 aa10.78□□□□□ -0.68
HDDC2-201ENST00000318787 UBE2D2P62837 147 aa10.78□□□□□ -0.68
HDDC2-201ENST00000318787 TOR2AQ5JU69 321 aa10.78□□□□□ -0.68
HDDC2-201ENST00000318787 KCNIP4Q6PIL6 250 aa10.78□□□□□ -0.68
HDDC2-201ENST00000318787 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.78□□□□□ -0.68
HDDC2-201ENST00000318787 NEXN-AS1Q8NBZ9 246 aa10.78□□□□□ -0.68
HDDC2-201ENST00000318787 EIF5A2Q9GZV4 153 aaKnown RBP10.78□□□□□ -0.68
HDDC2-201ENST00000318787 RNASE7Q9H1E1 156 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 289 ms