RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CFAP126Q5VTH2 177 aa10.94□□□□□ -0.66
PDLIM5-202ENST00000318007 OR4C5Q8NGB2 326 aa10.94□□□□□ -0.66
PDLIM5-202ENST00000318007 YPEL4Q96NS1 127 aa10.94□□□□□ -0.66
PDLIM5-202ENST00000318007 A0A1B0GXF2 115 aa10.94□□□□□ -0.66
PDLIM5-202ENST00000318007 F5H697 171 aa10.94□□□□□ -0.66
PDLIM5-202ENST00000318007 ZNF56Q15929 161 aa10.94□□□□□ -0.66
PDLIM5-202ENST00000318007 Q6ZTC4 211 aa10.94□□□□□ -0.66
PDLIM5-202ENST00000318007 FRZBQ92765 325 aa10.94□□□□□ -0.66
PDLIM5-202ENST00000318007 LYRM9A8MSI8 78 aa10.93□□□□□ -0.66
PDLIM5-202ENST00000318007 NXPH4O95158 308 aa10.93□□□□□ -0.66
PDLIM5-202ENST00000318007 LGALS9BQ3B8N2 356 aa10.93□□□□□ -0.66
PDLIM5-202ENST00000318007 C11orf45Q8TAV5 145 aa10.93□□□□□ -0.66
PDLIM5-202ENST00000318007 C11orf68Q9H3H3 251 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-202ENST00000318007 NACAE9PAV3 2078 aa10.93□□□□□ -0.66
PDLIM5-202ENST00000318007 C12orf74Q32Q52 190 aa10.92□□□□□ -0.66
PDLIM5-202ENST00000318007 SMIM15Q7Z3B0 74 aa10.92□□□□□ -0.66
PDLIM5-202ENST00000318007 IGHV4-4A0A075B6R2 117 aa10.92□□□□□ -0.66
PDLIM5-202ENST00000318007 SMKR1H3BMG3 65 aa10.92□□□□□ -0.66
PDLIM5-202ENST00000318007 TRGC1P0CF51 173 aa10.92□□□□□ -0.66
PDLIM5-202ENST00000318007 KIAA1644Q3SXP7 199 aa10.92□□□□□ -0.66
PDLIM5-202ENST00000318007 ATP5L2Q7Z4Y8 100 aa10.92□□□□□ -0.66
PDLIM5-202ENST00000318007 U3KQK5 164 aa10.92□□□□□ -0.66
PDLIM5-202ENST00000318007 COLCA2A8K830 154 aa10.91□□□□□ -0.66
PDLIM5-202ENST00000318007 GAS8-AS1O95177 125 aa10.91□□□□□ -0.66
PDLIM5-202ENST00000318007 NCR2O95944 276 aa10.91□□□□□ -0.66
PDLIM5-202ENST00000318007 CRYGDP07320 174 aa10.91□□□□□ -0.66
PDLIM5-202ENST00000318007 NHLRC4P0CG21 123 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-202ENST00000318007 RPS10P46783 165 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-202ENST00000318007 SLAQ13239 276 aa10.91□□□□□ -0.66
PDLIM5-202ENST00000318007 TRBV24-1A0A075B6N3 115 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 A8MWV9 139 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 P0DMU3 169 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 FAM231AP0DMU4 169 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 FAM231CP0DMU5 169 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 TMEM136Q6ZRR5 245 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 Q6ZSN1 163 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 TRGV4A0A0C4DH28 118 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 HOXA5P20719 270 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 DPH3P1Q9H4G8 78 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 Q9UF83 564 aa10.9□□□□□ -0.66
PDLIM5-202ENST00000318007 CSMD3Q7Z407 3707 aa10.9□□□□□ -0.67
PDLIM5-202ENST00000318007 TRAV4A0A0B4J268 109 aa10.89□□□□□ -0.67
PDLIM5-202ENST00000318007 F5H768 121 aa10.89□□□□□ -0.67
PDLIM5-202ENST00000318007 GATA1P15976 413 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-202ENST00000318007 DEFB104AQ8WTQ1 72 aa10.89□□□□□ -0.67
PDLIM5-202ENST00000318007 TMEM191AQ9H0A3 160 aa10.89□□□□□ -0.67
PDLIM5-202ENST00000318007 TRAV9-1A0A075B6T8 112 aa10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 A0A0J9YY99 117 aa10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 RS1O15537 224 aa10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 FABP9Q0Z7S8 132 aa10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 WDR73Q6P4I2 378 aa10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 TRAPPC1Q9Y5R8 145 aa10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 KIF25-AS1Q9Y6Z4 181 aa10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 RAB5AP20339 215 aa10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 LINC00612Q8N6U2 182 aa10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 RNF185Q96GF1 192 aa10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 MRPL18Q9H0U6 180 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-202ENST00000318007 ATP5G1P05496 136 aa10.87□□□□□ -0.67
PDLIM5-202ENST00000318007 RAB4AP20338 218 aa10.87□□□□□ -0.67
PDLIM5-202ENST00000318007 LINC00315P59091 139 aa10.87□□□□□ -0.67
PDLIM5-202ENST00000318007 LINC00469Q8N7U9 141 aa10.87□□□□□ -0.67
PDLIM5-202ENST00000318007 LOC100131303A0A0U1RQF7 123 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 A0A1B0GW15 77 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 D6R8Y8 96 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 TRGC2P03986 189 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 S100A8P05109 93 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 MRPL51Q4U2R6 128 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 FAM104BQ5XKR9 115 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 SUMO4Q6EEV6 95 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 UFSP1Q6NVU6 142 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 EDA2RQ9HAV5 297 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 APCSP02743 223 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 FHL2Q14192 279 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 RPL39LQ96EH5 51 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 LYSTQ99698 3801 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 GNB1LQ9BYB4 327 aa10.86□□□□□ -0.67
PDLIM5-202ENST00000318007 SLC25A29Q8N8R3 303 aa10.85□□□□□ -0.67
PDLIM5-202ENST00000318007 PTH2Q96A98 100 aa10.85□□□□□ -0.67
PDLIM5-202ENST00000318007 TRAV26-1A0A087WT03 109 aa10.85□□□□□ -0.67
PDLIM5-202ENST00000318007 TEX48A0A1B0GUV7 120 aa10.85□□□□□ -0.67
PDLIM5-202ENST00000318007 HLA-DQA1P01909 254 aa10.85□□□□□ -0.67
PDLIM5-202ENST00000318007 CKS2P33552 79 aa10.85□□□□□ -0.67
PDLIM5-202ENST00000318007 RASL11AQ6T310 242 aa10.85□□□□□ -0.67
PDLIM5-202ENST00000318007 GATD1Q8NB37 220 aa10.85□□□□□ -0.67
PDLIM5-202ENST00000318007 DEFB131BA0A096LNP1 70 aa10.84□□□□□ -0.67
PDLIM5-202ENST00000318007 A0A096LPF7 62 aa10.84□□□□□ -0.67
PDLIM5-202ENST00000318007 PIK3CD-AS1Q5SR53 167 aa10.84□□□□□ -0.67
PDLIM5-202ENST00000318007 HHLA3Q9XRX5 114 aa10.84□□□□□ -0.67
PDLIM5-202ENST00000318007 RHODO00212 210 aa10.83□□□□□ -0.68
PDLIM5-202ENST00000318007 ZFP2Q6ZN57 461 aa10.82□□□□□ -0.68
PDLIM5-202ENST00000318007 NDUFAF3Q9BU61 184 aa10.82□□□□□ -0.68
PDLIM5-202ENST00000318007 GAGE12JA6NER3 117 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 K7EQD1 137 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 M0QY20 66 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 MT-ND6P03923 174 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 SRIP30626 198 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 S100A12P80511 92 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 GAGE1Q13065 139 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 GAGE4Q13068 117 aa10.81□□□□□ -0.68
PDLIM5-202ENST00000318007 GAGE5Q13069 117 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms