RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 TCTEX1D4Q5JR98 221 aa5.73□□□□□ -1.49
TRIM55-202ENST00000315962 TSSC4Q9Y5U2 329 aaPredicted RBP5.73□□□□□ -1.49
TRIM55-202ENST00000315962 TRAV12-2A0A075B6T6 113 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 IGKV3D-20A0A0C4DH25 116 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 A0A1B0GV72 72 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 H3BVH4 76 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 IGKCP01834 107 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 PRM2P04554 102 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 OR11H1Q8NG94 326 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 TMEM190Q8WZ59 177 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 NSD1Q96L73 2696 aaPredicted RBP5.72□□□□□ -1.49
TRIM55-202ENST00000315962 IGHV7-4-1A0A0J9YVY3 117 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 DNAJC9-AS1A6NH13 148 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 M0R381 172 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 FSHBP01225 129 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 SMIM17P0DL12 118 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 RNASE4P34096 147 aaKnown RBP5.72□□□□□ -1.49
TRIM55-202ENST00000315962 CRIP2P52943 208 aaPredicted RBP5.72□□□□□ -1.49
TRIM55-202ENST00000315962 PSMG4Q5JS54 123 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 LRRC75A-AS1Q8N1F1 130 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 OR9G4Q8NGQ1 327 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 U3KQE9 123 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 U3KQK5 164 aa5.72□□□□□ -1.49
TRIM55-202ENST00000315962 IGLC6P0CF74 106 aa5.71□□□□□ -1.49
TRIM55-202ENST00000315962 AZU1P20160 251 aa5.71□□□□□ -1.49
TRIM55-202ENST00000315962 Q6AWC8 147 aa5.71□□□□□ -1.49
TRIM55-202ENST00000315962 CYSLTR1Q9Y271 337 aa5.71□□□□□ -1.49
TRIM55-202ENST00000315962 PGPEP1Q9NXJ5 209 aa5.71□□□□□ -1.5
TRIM55-202ENST00000315962 FABP5P3A8MUU1 101 aa5.71□□□□□ -1.5
TRIM55-202ENST00000315962 SPANXN1Q5VSR9 72 aa5.71□□□□□ -1.5
TRIM55-202ENST00000315962 SAMD13Q5VXD3 122 aa5.71□□□□□ -1.5
TRIM55-202ENST00000315962 KLHL30-AS1Q8NEE0 82 aa5.71□□□□□ -1.5
TRIM55-202ENST00000315962 RPL39LQ96EH5 51 aaKnown RBP5.71□□□□□ -1.5
TRIM55-202ENST00000315962 HIST1H4GQ99525 98 aa5.71□□□□□ -1.5
TRIM55-202ENST00000315962 SLC50A1Q9BRV3 221 aa5.71□□□□□ -1.5
TRIM55-202ENST00000315962 A0A1B0GW15 77 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 GNRH2O43555 120 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 KRTAP1-1Q07627 177 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 Q6ZSV7 163 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 ATP6V0BQ99437 205 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 TRRAPQ9Y4A5 3859 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 DPM2O94777 84 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 MGPP08493 103 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 CRYBA4P53673 196 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 GATD1Q8NB37 220 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 F8P00451 2351 aa5.7□□□□□ -1.5
TRIM55-202ENST00000315962 KLK9Q2XQG4 91 aa5.69□□□□□ -1.5
TRIM55-202ENST00000315962 CEND1Q8N111 149 aa5.69□□□□□ -1.5
TRIM55-202ENST00000315962 OR10J6PQ8NGY7 276 aa5.69□□□□□ -1.5
TRIM55-202ENST00000315962 KLK9Q9UKQ9 250 aa5.69□□□□□ -1.5
TRIM55-202ENST00000315962 TRAV12-3A0A0B4J271 114 aa5.69□□□□□ -1.5
TRIM55-202ENST00000315962 PHLDA1Q8WV24 401 aaPredicted RBP5.69□□□□□ -1.5
TRIM55-202ENST00000315962 DLX4Q92988 240 aaPredicted RBP5.69□□□□□ -1.5
TRIM55-202ENST00000315962 PTH2Q96A98 100 aa5.69□□□□□ -1.5
TRIM55-202ENST00000315962 MUC4Q99102 2169 aa5.69□□□□□ -1.5
TRIM55-202ENST00000315962 TRBV6-1A0A0K0K1D8 114 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 IGLL5B9A064 214 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 H3BUA1 57 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 SOCS3O14543 225 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 CD28P10747 220 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 C14orf178Q8N769 122 aaPredicted RBP5.68□□□□□ -1.5
TRIM55-202ENST00000315962 DCANP1Q8TF63 244 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 DPF1Q92782 380 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 TRAV26-1A0A087WT03 109 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 LGALS1P09382 135 aaKnown RBP5.68□□□□□ -1.5
TRIM55-202ENST00000315962 SPINK13Q1W4C9 94 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 C12orf74Q32Q52 190 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 C9orf139Q6ZV77 190 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 APRG1Q8IVJ8 170 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 OR5A1Q8NGJ0 315 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 ZNF418Q8TF45 676 aaPredicted RBP5.68□□□□□ -1.5
TRIM55-202ENST00000315962 LOC107984156A0A0G2JMH3 177 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 KNCNA6PVL3 124 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 BRI3O95415 125 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 APOMO95445 188 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 HLA-DRB4P13762 266 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 ARL17AQ8IVW1 177 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 MYOZ3Q8TDC0 251 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 UBE2E2Q96LR5 201 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 SPAG8Q99932 426 aaPredicted RBP5.68□□□□□ -1.5
TRIM55-202ENST00000315962 CITED2Q99967 270 aaPredicted RBP5.68□□□□□ -1.5
TRIM55-202ENST00000315962 HLA-DRB4X5D2U9 266 aa5.68□□□□□ -1.5
TRIM55-202ENST00000315962 PRSS29PA6NIE9 313 aa5.67□□□□□ -1.5
TRIM55-202ENST00000315962 S100A4P26447 101 aaKnown RBP5.67□□□□□ -1.5
TRIM55-202ENST00000315962 CD300EQ496F6 205 aaPredicted RBP5.67□□□□□ -1.5
TRIM55-202ENST00000315962 ZFAND2AQ8N6M9 145 aa5.67□□□□□ -1.5
TRIM55-202ENST00000315962 NRACQ8N912 160 aa5.67□□□□□ -1.5
TRIM55-202ENST00000315962 PLEKHB2Q96CS7 222 aa5.67□□□□□ -1.5
TRIM55-202ENST00000315962 C20orf78Q9BR46 151 aa5.67□□□□□ -1.5
TRIM55-202ENST00000315962 NXT2Q9NPJ8 142 aaKnown RBP5.67□□□□□ -1.5
TRIM55-202ENST00000315962 IGLV2-18A0A075B6J9 118 aa5.67□□□□□ -1.5
TRIM55-202ENST00000315962 LAGE3Q14657 143 aa5.67□□□□□ -1.5
TRIM55-202ENST00000315962 ANXA2RQ3ZCQ2 193 aa5.67□□□□□ -1.5
TRIM55-202ENST00000315962 C9orf47Q6ZRZ4 202 aa5.67□□□□□ -1.5
TRIM55-202ENST00000315962 JPT2Q9H910 190 aa5.67□□□□□ -1.5
TRIM55-202ENST00000315962 SPANXB1Q9NS25 103 aaPredicted RBP5.67□□□□□ -1.5
TRIM55-202ENST00000315962 A0A1B0GWB2 263 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 INAFM1C9JVW0 142 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 SIVA1O15304 175 aa5.66□□□□□ -1.5
TRIM55-202ENST00000315962 ELANEP08246 267 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 253.7 ms