RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 KIF25-AS1Q9Y6Z4 181 aa8.9□□□□□ -0.98
CHMP2A-201ENST00000312547 LINC00315P59091 139 aa8.89□□□□□ -0.99
CHMP2A-201ENST00000312547 SSTP61278 116 aa8.89□□□□□ -0.99
CHMP2A-201ENST00000312547 AP1S3Q96PC3 154 aa8.89□□□□□ -0.99
CHMP2A-201ENST00000312547 RPS10P5Q9NQ39 176 aa8.89□□□□□ -0.99
CHMP2A-201ENST00000312547 A0A087WWL8 130 aa8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 F5H768 121 aa8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 RHODO00212 210 aa8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 HTN3P15516 51 aa8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 GATA1P15976 413 aaPredicted RBP8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 RIGQ13278 110 aa8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 TWIST1Q15672 202 aa8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 CEMP1Q6PRD7 247 aaPredicted RBP8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 ATRAIDQ6UW56 229 aa8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 C14orf178Q8N769 122 aaPredicted RBP8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 BORCS7Q96B45 105 aa8.88□□□□□ -0.99
CHMP2A-201ENST00000312547 DNAH1Q9P2D7 4330 aa8.87□□□□□ -0.99
CHMP2A-201ENST00000312547 A0A1B0GXF2 115 aa8.87□□□□□ -0.99
CHMP2A-201ENST00000312547 NUPR2A6NF83 97 aa8.87□□□□□ -0.99
CHMP2A-201ENST00000312547 TRGC1P0CF51 173 aa8.87□□□□□ -0.99
CHMP2A-201ENST00000312547 EVI2AP22794 236 aa8.87□□□□□ -0.99
CHMP2A-201ENST00000312547 Q6ZSN1 163 aa8.87□□□□□ -0.99
CHMP2A-201ENST00000312547 FAM210BQ96KR6 192 aa8.87□□□□□ -0.99
CHMP2A-201ENST00000312547 IGHV3-73A0A0B4J1V6 119 aa8.86□□□□□ -0.99
CHMP2A-201ENST00000312547 TRGV4A0A0C4DH28 118 aa8.86□□□□□ -0.99
CHMP2A-201ENST00000312547 A0A1B0GW15 77 aa8.86□□□□□ -0.99
CHMP2A-201ENST00000312547 CRYBA4P53673 196 aa8.86□□□□□ -0.99
CHMP2A-201ENST00000312547 SLAQ13239 276 aa8.86□□□□□ -0.99
CHMP2A-201ENST00000312547 FAM74A4Q5TZK3 123 aa8.86□□□□□ -0.99
CHMP2A-201ENST00000312547 VSIG2Q96IQ7 327 aa8.86□□□□□ -0.99
CHMP2A-201ENST00000312547 LYSTQ99698 3801 aa8.86□□□□□ -0.99
CHMP2A-201ENST00000312547 PRO0255Q9UI72 69 aa8.86□□□□□ -0.99
CHMP2A-201ENST00000312547 HHLA3Q9XRX5 114 aa8.86□□□□□ -0.99
CHMP2A-201ENST00000312547 TRAV9-1A0A075B6T8 112 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 TRBV6-4A0A1B0GX49 114 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 H3BNG1 76 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 ZFAND6Q6FIF0 208 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 MRPL54Q6P161 138 aaKnown RBP8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 TMEM88Q6PEY1 159 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 KCNIP4Q6PIL6 250 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 ATP5L2Q7Z4Y8 100 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 GATD1Q8NB37 220 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 BTF3L4Q96K17 158 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 TMEM191AQ9H0A3 160 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 DPH3P1Q9H4G8 78 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 BIRC6Q9NR09 4857 aa8.85□□□□□ -0.99
CHMP2A-201ENST00000312547 TRAV26-1A0A087WT03 109 aa8.84□□□□□ -0.99
CHMP2A-201ENST00000312547 C3orf84H3BNL1 204 aa8.84□□□□□ -0.99
CHMP2A-201ENST00000312547 SMIM17P0DL12 118 aa8.84□□□□□ -0.99
CHMP2A-201ENST00000312547 RAB4BP61018 213 aa8.84□□□□□ -0.99
CHMP2A-201ENST00000312547 HBBP68871 147 aa8.84□□□□□ -0.99
CHMP2A-201ENST00000312547 SLC25A29Q8N8R3 303 aa8.84□□□□□ -0.99
CHMP2A-201ENST00000312547 STARD9Q9P2P6 4700 aa8.84□□□□□ -0.99
CHMP2A-201ENST00000312547 PAX4O43316 350 aa8.83□□□□□ -1
CHMP2A-201ENST00000312547 S100PP25815 95 aa8.83□□□□□ -1
CHMP2A-201ENST00000312547 SMIM15Q7Z3B0 74 aa8.83□□□□□ -1
CHMP2A-201ENST00000312547 KLK5Q9Y337 293 aaPredicted RBP8.83□□□□□ -1
CHMP2A-201ENST00000312547 URGCP-MRPS24S4R325 110 aa8.83□□□□□ -1
CHMP2A-201ENST00000312547 NACAE9PAV3 2078 aa8.83□□□□□ -1
CHMP2A-201ENST00000312547 CSMD3Q7Z407 3707 aa8.83□□□□□ -1
CHMP2A-201ENST00000312547 A0A0J9YY99 117 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 IGLL5B9A064 214 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 K7EQD1 137 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 ATP6V1G1O75348 118 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 S100A8P05109 93 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 CAMPP49913 170 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 RHOHQ15669 191 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 ZNF56Q15929 161 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 CASC10Q5T4H9 136 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 RNF185Q96GF1 192 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 YPEL4Q96NS1 127 aa8.82□□□□□ -1
CHMP2A-201ENST00000312547 TRBV10-1A0A0K0K1A3 114 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 M0QY20 66 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 MGPP08493 103 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 TCTAP57738 103 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 ELOBQ15370 118 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 FAM104BQ5XKR9 115 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 SUMO4Q6EEV6 95 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 RASL11AQ6T310 242 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 AMN1Q8IY45 258 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 Q9UF83 564 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 APLNQ9ULZ1 77 aa8.81□□□□□ -1
CHMP2A-201ENST00000312547 PLECQ15149 4684 aaKnown RBP8.81□□□□□ -1
CHMP2A-201ENST00000312547 TRBV24-1A0A075B6N3 115 aa8.8□□□□□ -1
CHMP2A-201ENST00000312547 LOC100131303A0A0U1RQF7 123 aa8.8□□□□□ -1
CHMP2A-201ENST00000312547 F5H697 171 aa8.8□□□□□ -1
CHMP2A-201ENST00000312547 LINC00694P0DN24 101 aa8.8□□□□□ -1
CHMP2A-201ENST00000312547 GYPEP15421 78 aa8.8□□□□□ -1
CHMP2A-201ENST00000312547 RAB4AP20338 218 aa8.8□□□□□ -1
CHMP2A-201ENST00000312547 C15orf53Q8NAA6 179 aa8.8□□□□□ -1
CHMP2A-201ENST00000312547 FRZBQ92765 325 aa8.8□□□□□ -1
CHMP2A-201ENST00000312547 PRADC1Q9BSG0 188 aa8.8□□□□□ -1
CHMP2A-201ENST00000312547 SMCO4Q9NRQ5 59 aa8.8□□□□□ -1
CHMP2A-201ENST00000312547 A0A096LPF7 62 aa8.79□□□□□ -1
CHMP2A-201ENST00000312547 TGIF2-C20orf24A0A0A6YYL0 155 aa8.79□□□□□ -1
CHMP2A-201ENST00000312547 P0DMU3 169 aa8.79□□□□□ -1
CHMP2A-201ENST00000312547 FAM231AP0DMU4 169 aa8.79□□□□□ -1
CHMP2A-201ENST00000312547 FAM231CP0DMU5 169 aa8.79□□□□□ -1
CHMP2A-201ENST00000312547 S100A1P23297 94 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms