RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 TRGV1A0A0A0MS02 117 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 GAGE12BA1L429 117 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 SNURFLB1AK76 121 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 EIF4EBP3O60516 100 aaPredicted RBP3.68□□□□□ -1.82
CAST-201ENST00000309190 GAGE7O76087 117 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 IGLV1-40P01703 118 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 GAGE12FP0CL80 117 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 GAGE12GP0CL81 117 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 GAGE12IP0CL82 117 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 NTF3P20783 257 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 SPANXN1Q5VSR9 72 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 ZFAND6Q6FIF0 208 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 TEX29Q8N6K0 151 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 SPAG8Q99932 426 aaPredicted RBP3.68□□□□□ -1.82
CAST-201ENST00000309190 MRPL32Q9BYC8 188 aaKnown RBP3.68□□□□□ -1.82
CAST-201ENST00000309190 PSG8Q9UQ74 426 aa3.68□□□□□ -1.82
CAST-201ENST00000309190 DIRC3C9JPN6 131 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 ZNF80P51504 273 aaPredicted RBP3.67□□□□□ -1.82
CAST-201ENST00000309190 TWIST1Q15672 202 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 C5orf17Q8NAS9 161 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 NUDT10Q8NFP7 164 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 NUDT11Q96G61 164 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 CNFNQ9BYD5 112 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 MRPL16Q9NX20 251 aaKnown RBP3.67□□□□□ -1.82
CAST-201ENST00000309190 TRBV19A0A075B6N1 114 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 FSHBP01225 129 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 P01737 135 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 TCRAP04437 139 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 DEFB114Q30KQ6 69 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 VAMP8Q9BV40 100 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 IBA57Q5T440 356 aaKnown RBP3.67□□□□□ -1.82
CAST-201ENST00000309190 FAM159AQ6UWV7 190 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 CHCHD1Q96BP2 118 aaKnown RBP3.67□□□□□ -1.82
CAST-201ENST00000309190 ST20Q9HBF5 79 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 TMEM167BQ9NRX6 74 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 NDUFA4O00483 81 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 SRIP30626 198 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 ZNF415Q09FC8 603 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 C14orf178Q8N769 122 aaPredicted RBP3.67□□□□□ -1.82
CAST-201ENST00000309190 NOP10Q9NPE3 64 aaKnown RBP3.67□□□□□ -1.82
CAST-201ENST00000309190 MDFICQ9P1T7 246 aa3.67□□□□□ -1.82
CAST-201ENST00000309190 TMEM189A5PLL7 270 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 ADARB2-AS1A8MUL3 147 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 SNAI2O43623 268 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 GATA1P15976 413 aaPredicted RBP3.66□□□□□ -1.82
CAST-201ENST00000309190 AZU1P20160 251 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 PMCHL1Q16048 86 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 OR8A1Q8NGG7 326 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 ZNF331Q9NQX6 463 aaPredicted RBP3.66□□□□□ -1.82
CAST-201ENST00000309190 TMEM14CQ9P0S9 112 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 ZNF256Q9Y2P7 627 aaPredicted RBP3.66□□□□□ -1.82
CAST-201ENST00000309190 IGLV2-18A0A075B6J9 118 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.66□□□□□ -1.82
CAST-201ENST00000309190 OR4C46A6NHA9 309 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 SYS1-DBNDD2H3BUS1 97 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 P0DMU3 169 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 FAM231AP0DMU4 169 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 FAM231CP0DMU5 169 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 PSG3Q16557 428 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 PRR9Q5T870 116 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 FAM19A2Q8N3H0 131 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 ZC2HC1AQ96GY0 325 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 PHLDA3Q9Y5J5 127 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 A0A087X0K7 114 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 IGKV3D-20A0A0C4DH25 116 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 H3BRN7 92 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 RRN3P1Q2M238 152 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 C4orf3Q8WVX3 66 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 NAT8BQ9UHF3 227 aa3.66□□□□□ -1.82
CAST-201ENST00000309190 LOC102724200A0A096LPH7 203 aaPredicted RBP3.65□□□□□ -1.82
CAST-201ENST00000309190 ODF3L2Q3SX64 289 aa3.65□□□□□ -1.82
CAST-201ENST00000309190 ANXA2RQ3ZCQ2 193 aa3.65□□□□□ -1.82
CAST-201ENST00000309190 C19orf54Q5BKX5 351 aa3.65□□□□□ -1.82
CAST-201ENST00000309190 PMCHL2Q9BQD1 86 aa3.65□□□□□ -1.82
CAST-201ENST00000309190 HHLA3Q9XRX5 114 aa3.65□□□□□ -1.82
CAST-201ENST00000309190 TRAV8-6A0A0B4J262 113 aa3.65□□□□□ -1.83
CAST-201ENST00000309190 HIGD1CA8MV81 97 aa3.65□□□□□ -1.83
CAST-201ENST00000309190 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
CAST-201ENST00000309190 CLPSL2Q6UWE3 100 aa3.65□□□□□ -1.83
CAST-201ENST00000309190 CSTL1Q9H114 145 aa3.65□□□□□ -1.83
CAST-201ENST00000309190 Q9UF83 564 aa3.65□□□□□ -1.83
CAST-201ENST00000309190 IGHV4-30-4P0DP06 118 aa3.65□□□□□ -1.83
CAST-201ENST00000309190 ZNF56Q15929 161 aa3.65□□□□□ -1.83
CAST-201ENST00000309190 OR10AG1Q8NH19 301 aa3.65□□□□□ -1.83
CAST-201ENST00000309190 MAP6D1Q9H9H5 199 aa3.65□□□□□ -1.83
CAST-201ENST00000309190 WIPF1O43516 503 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 ARMS2P0C7Q2 107 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 COX8AP10176 69 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 HLA-DRB4P13762 266 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 OR11H2Q8NH07 326 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 ZNF747Q9BV97 191 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 HLA-DRB4X5D2U9 266 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 TRAV8-2A0A0B4J237 113 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 F5H768 121 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 SH2D1AO60880 128 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 NUDT3O95989 172 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 ZNF876PQ49A33 203 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 PRO0461Q9UI25 63 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 APCSP02743 223 aa3.64□□□□□ -1.83
CAST-201ENST00000309190 GPHB5Q86YW7 130 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms