RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 NDUFA11Q86Y39 141 aa8.46□□□□□ -1.05
PTPN7-201ENST00000309017 SETXQ7Z333 2677 aaKnown RBP8.46□□□□□ -1.05
PTPN7-201ENST00000309017 TRAV2A0A0B4J234 112 aa8.46□□□□□ -1.06
PTPN7-201ENST00000309017 LINC01619G3V211 115 aa8.46□□□□□ -1.06
PTPN7-201ENST00000309017 OVOL1O14753 267 aa8.46□□□□□ -1.06
PTPN7-201ENST00000309017 XGP55808 180 aa8.46□□□□□ -1.06
PTPN7-201ENST00000309017 PMVKQ15126 192 aa8.46□□□□□ -1.06
PTPN7-201ENST00000309017 ATP6V0E2Q8NHE4 81 aa8.46□□□□□ -1.06
PTPN7-201ENST00000309017 ANAPC13Q9BS18 74 aa8.46□□□□□ -1.06
PTPN7-201ENST00000309017 CSMD2Q7Z408 3487 aa8.46□□□□□ -1.06
PTPN7-201ENST00000309017 C9JAW5 83 aa8.46□□□□□ -1.06
PTPN7-201ENST00000309017 EBI3Q14213 229 aa8.46□□□□□ -1.06
PTPN7-201ENST00000309017 TRAV41A0A0B4J266 112 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 TCF15Q12870 199 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 JPT2Q9H910 190 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 TRBV20-1A0A075B6N2 111 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 CD7P09564 240 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 UBE2D1P51668 147 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 ZFAND2AQ8N6M9 145 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 CDIP1Q9H305 208 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 PRO1854Q9UHT4 67 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 A0A0J9YY99 117 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 IGKV3-20P01619 116 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 ZNF56Q15929 161 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 UNQ9165/PRO28630Q6UXU0 137 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 Q6ZS46 218 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
PTPN7-201ENST00000309017 ANKRD29Q8N6D5 301 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 TEP1Q99973 2627 aaKnown RBP8.44□□□□□ -1.06
PTPN7-201ENST00000309017 ZNF688P0C7X2 276 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 PF4V1P10720 104 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 C1orf122Q6ZSJ8 110 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 C10orf126Q8N4M7 172 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 TEX29Q8N6K0 151 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 SDHAF1A6NFY7 115 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 TRBV12-3P01733 135 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 UBE2E1P51965 193 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 LY6EQ16553 131 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 CUBNO60494 3623 aa8.44□□□□□ -1.06
PTPN7-201ENST00000309017 J3QQQ9 107 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 VCYO14598 125 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 ZFAND6Q6FIF0 208 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 IGHV4-39P01824 125 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 PRSS2P07478 247 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 VCX2Q9H322 139 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 SORL1Q92673 2214 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 TRAV12-3A0A0B4J271 114 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 SLC25A20O43772 301 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 CFC1BP0CG36 223 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 CFC1P0CG37 223 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 ERG28Q9UKR5 140 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 ACANP16112 2415 aa8.43□□□□□ -1.06
PTPN7-201ENST00000309017 CENPVL3A0A0U1RRI6 287 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 RNF183Q96D59 192 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 TMEM262E9PQX1 116 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 UBE2D3P61077 147 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 UBE2D2P62837 147 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 SIRPDQ9H106 197 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 A4D1N5 150 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 NPFFO15130 113 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 COX6B1P14854 86 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 SUMO4Q6EEV6 95 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 CARD19Q96LW7 228 aa8.42□□□□□ -1.06
PTPN7-201ENST00000309017 IGHV1-69DA0A0B4J2H0 117 aa8.41□□□□□ -1.06
PTPN7-201ENST00000309017 SNCGO76070 127 aa8.41□□□□□ -1.06
PTPN7-201ENST00000309017 CRYGDP07320 174 aa8.41□□□□□ -1.06
PTPN7-201ENST00000309017 FHL3Q13643 280 aa8.41□□□□□ -1.06
PTPN7-201ENST00000309017 TRPT1Q86TN4 253 aaKnown RBP8.41□□□□□ -1.06
PTPN7-201ENST00000309017 OPRPNQ99935 248 aaPredicted RBP8.41□□□□□ -1.06
PTPN7-201ENST00000309017 RNASE3P12724 160 aaKnown RBP8.41□□□□□ -1.06
PTPN7-201ENST00000309017 TSPEAR-AS2P59090 65 aa8.41□□□□□ -1.06
PTPN7-201ENST00000309017 IGLV4-69A0A075B6H9 119 aa8.41□□□□□ -1.06
PTPN7-201ENST00000309017 BRD3OSQ6XYD6 125 aa8.41□□□□□ -1.06
PTPN7-201ENST00000309017 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
PTPN7-201ENST00000309017 RHPN1-AS1Q9BWJ2 59 aa8.41□□□□□ -1.06
PTPN7-201ENST00000309017 IGHV3-30P01768 117 aa8.4□□□□□ -1.06
PTPN7-201ENST00000309017 IGHV3-30-5P0DP03 117 aa8.4□□□□□ -1.06
PTPN7-201ENST00000309017 CDSNQ15517 529 aa8.4□□□□□ -1.06
PTPN7-201ENST00000309017 ITLN2Q8WWU7 325 aaPredicted RBP8.4□□□□□ -1.06
PTPN7-201ENST00000309017 GPHB5Q86YW7 130 aa8.4□□□□□ -1.06
PTPN7-201ENST00000309017 C5orf56Q8N8D9 126 aa8.4□□□□□ -1.06
PTPN7-201ENST00000309017 SLC25A29Q8N8R3 303 aa8.4□□□□□ -1.06
PTPN7-201ENST00000309017 MOB4Q9Y3A3 225 aa8.4□□□□□ -1.06
PTPN7-201ENST00000309017 U3KQE9 123 aa8.4□□□□□ -1.06
PTPN7-201ENST00000309017 FAM223BA6NKX1 122 aa8.4□□□□□ -1.07
PTPN7-201ENST00000309017 TSHBP01222 138 aa8.4□□□□□ -1.07
PTPN7-201ENST00000309017 HTN1P15515 57 aa8.4□□□□□ -1.07
PTPN7-201ENST00000309017 LY6DQ14210 128 aa8.4□□□□□ -1.07
PTPN7-201ENST00000309017 FAM223AQ8IWN6 122 aa8.4□□□□□ -1.07
PTPN7-201ENST00000309017 GAGE2BQ13066 116 aa8.39□□□□□ -1.07
PTPN7-201ENST00000309017 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
PTPN7-201ENST00000309017 NTN5Q8WTR8 489 aaPredicted RBP8.39□□□□□ -1.07
PTPN7-201ENST00000309017 BPESC1Q9GZL8 116 aa8.39□□□□□ -1.07
PTPN7-201ENST00000309017 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
PTPN7-201ENST00000309017 ADARB2-AS1A8MUL3 147 aa8.39□□□□□ -1.07
PTPN7-201ENST00000309017 ZNRF2Q8NHG8 242 aa8.39□□□□□ -1.07
PTPN7-201ENST00000309017 CHD6Q8TD26 2715 aa8.39□□□□□ -1.07
PTPN7-201ENST00000309017 TTC32Q5I0X7 151 aa8.39□□□□□ -1.07
PTPN7-201ENST00000309017 SS18L2Q9UHA2 77 aa8.39□□□□□ -1.07
PTPN7-201ENST00000309017 IGIPA6NJ69 53 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms