RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 DAND5Q8N907 189 aa11.1□□□□□ -0.63
PTPN9-201ENST00000306726 ANKRD17O75179 2603 aaKnown RBP11.09□□□□□ -0.63
PTPN9-201ENST00000306726 TRAV21A0A0B4J279 112 aa11.09□□□□□ -0.63
PTPN9-201ENST00000306726 TRPT1Q86TN4 253 aaKnown RBP11.09□□□□□ -0.63
PTPN9-201ENST00000306726 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
PTPN9-201ENST00000306726 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
PTPN9-201ENST00000306726 C10orf99Q6UWK7 81 aa11.09□□□□□ -0.63
PTPN9-201ENST00000306726 DPH3P1Q9H4G8 78 aa11.08□□□□□ -0.64
PTPN9-201ENST00000306726 CHD6Q8TD26 2715 aa11.08□□□□□ -0.64
PTPN9-201ENST00000306726 TRAV26-1A0A087WT03 109 aa11.08□□□□□ -0.64
PTPN9-201ENST00000306726 SDHAF1A6NFY7 115 aa11.08□□□□□ -0.64
PTPN9-201ENST00000306726 TNFRSF13BO14836 293 aaPredicted RBP11.08□□□□□ -0.64
PTPN9-201ENST00000306726 LGALS1P09382 135 aaKnown RBP11.08□□□□□ -0.64
PTPN9-201ENST00000306726 PLNP26678 52 aa11.08□□□□□ -0.64
PTPN9-201ENST00000306726 ZNF876PQ49A33 203 aa11.08□□□□□ -0.64
PTPN9-201ENST00000306726 TMEM238LA0A1B0GVL6 79 aa11.08□□□□□ -0.64
PTPN9-201ENST00000306726 A6NJY4 79 aa11.08□□□□□ -0.64
PTPN9-201ENST00000306726 MT-ATP8P03928 68 aa11.08□□□□□ -0.64
PTPN9-201ENST00000306726 A0A1W2PPR1 153 aa11.07□□□□□ -0.64
PTPN9-201ENST00000306726 ORMDL2Q53FV1 153 aa11.07□□□□□ -0.64
PTPN9-201ENST00000306726 PIMREGQ9BSJ6 248 aa11.07□□□□□ -0.64
PTPN9-201ENST00000306726 LY6LH3BQJ8 138 aa11.07□□□□□ -0.64
PTPN9-201ENST00000306726 P0DMU3 169 aa11.07□□□□□ -0.64
PTPN9-201ENST00000306726 FAM231AP0DMU4 169 aa11.07□□□□□ -0.64
PTPN9-201ENST00000306726 FAM231CP0DMU5 169 aa11.07□□□□□ -0.64
PTPN9-201ENST00000306726 GEMIN7Q9H840 131 aaKnown RBP11.07□□□□□ -0.64
PTPN9-201ENST00000306726 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
PTPN9-201ENST00000306726 A8MZ25 164 aa11.07□□□□□ -0.64
PTPN9-201ENST00000306726 NPFFO15130 113 aa11.07□□□□□ -0.64
PTPN9-201ENST00000306726 RASL10AQ92737 203 aa11.07□□□□□ -0.64
PTPN9-201ENST00000306726 DLX4Q92988 240 aaPredicted RBP11.07□□□□□ -0.64
PTPN9-201ENST00000306726 BAALCQ8WXS3 180 aa11.06□□□□□ -0.64
PTPN9-201ENST00000306726 ZNF580Q9UK33 172 aa11.06□□□□□ -0.64
PTPN9-201ENST00000306726 RNF5Q99942 180 aa11.06□□□□□ -0.64
PTPN9-201ENST00000306726 OR11H6Q8NGC7 330 aa11.06□□□□□ -0.64
PTPN9-201ENST00000306726 IGHV4-38-2P0DP08 117 aa11.05□□□□□ -0.64
PTPN9-201ENST00000306726 DGAT2L7PQ6IED9 249 aa11.05□□□□□ -0.64
PTPN9-201ENST00000306726 C8orf31Q8N9H6 132 aa11.05□□□□□ -0.64
PTPN9-201ENST00000306726 CFAP46Q8IYW2 2715 aa11.05□□□□□ -0.64
PTPN9-201ENST00000306726 UBR5O95071 2799 aaPredicted RBP11.05□□□□□ -0.64
PTPN9-201ENST00000306726 RBAKDNA6NC62 111 aa11.05□□□□□ -0.64
PTPN9-201ENST00000306726 ATP5J2P56134 94 aa11.05□□□□□ -0.64
PTPN9-201ENST00000306726 CSMD2Q7Z408 3487 aa11.05□□□□□ -0.64
PTPN9-201ENST00000306726 NRACQ8N912 160 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 FAM110DQ8TAY7 271 aaPredicted RBP11.04□□□□□ -0.64
PTPN9-201ENST00000306726 MDFICQ9P1T7 246 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 NBEAL2Q6ZNJ1 2754 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 SIVA1O15304 175 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 RS1O15537 224 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 SMPXQ9UHP9 88 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 U3KQK5 164 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 FBN2P35556 2912 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 SYNJ2BPP57105 145 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 NPBQ8NG41 125 aa11.04□□□□□ -0.64
PTPN9-201ENST00000306726 IGHV7-4-1A0A0J9YVY3 117 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 A0A0J9YXV3 536 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 F8W1H4 67 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 IGHV3-53P01767 116 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 ATP6V0BQ99437 205 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 CLPSL1A2RUU4 121 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 A8MWV9 139 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 DEFB136Q30KP8 78 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 SS18L2Q9UHA2 77 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 E9PLD3 99 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 ANAPC13Q9BS18 74 aa11.03□□□□□ -0.64
PTPN9-201ENST00000306726 TRAV8-3A0A0A6YYJ7 113 aa11.02□□□□□ -0.64
PTPN9-201ENST00000306726 DEFB113Q30KQ7 82 aa11.02□□□□□ -0.64
PTPN9-201ENST00000306726 VCX2Q9H322 139 aa11.02□□□□□ -0.64
PTPN9-201ENST00000306726 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.64
PTPN9-201ENST00000306726 Q6ZSV7 163 aa11.02□□□□□ -0.65
PTPN9-201ENST00000306726 M0R1W7 72 aa11.02□□□□□ -0.65
PTPN9-201ENST00000306726 NF1P21359 2839 aa11.01□□□□□ -0.65
PTPN9-201ENST00000306726 A4D1N5 150 aa11.01□□□□□ -0.65
PTPN9-201ENST00000306726 PROK1P58294 105 aa11.01□□□□□ -0.65
PTPN9-201ENST00000306726 CENPVL3A0A0U1RRI6 287 aa11.01□□□□□ -0.65
PTPN9-201ENST00000306726 A0A1W2PRX2 142 aa11.01□□□□□ -0.65
PTPN9-201ENST00000306726 TSPAN13O95857 204 aa11□□□□□ -0.65
PTPN9-201ENST00000306726 TCL1BO95988 128 aa11□□□□□ -0.65
PTPN9-201ENST00000306726 C16orf54Q6UWD8 224 aa11□□□□□ -0.65
PTPN9-201ENST00000306726 C10orf105Q8TEF2 133 aa11□□□□□ -0.65
PTPN9-201ENST00000306726 NTN5Q8WTR8 489 aaPredicted RBP11□□□□□ -0.65
PTPN9-201ENST00000306726 CD28P10747 220 aa11□□□□□ -0.65
PTPN9-201ENST00000306726 SUMO4Q6EEV6 95 aa11□□□□□ -0.65
PTPN9-201ENST00000306726 B5MCH6 92 aa10.99□□□□□ -0.65
PTPN9-201ENST00000306726 CELSR2Q9HCU4 2923 aa10.99□□□□□ -0.65
PTPN9-201ENST00000306726 CRIP2P52943 208 aaPredicted RBP10.99□□□□□ -0.65
PTPN9-201ENST00000306726 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
PTPN9-201ENST00000306726 FOXI1Q12951 378 aa10.99□□□□□ -0.65
PTPN9-201ENST00000306726 C9orf139Q6ZV77 190 aa10.99□□□□□ -0.65
PTPN9-201ENST00000306726 J3QQQ9 107 aa10.98□□□□□ -0.65
PTPN9-201ENST00000306726 CRYBA4P53673 196 aa10.98□□□□□ -0.65
PTPN9-201ENST00000306726 MRAP2Q96G30 205 aa10.98□□□□□ -0.65
PTPN9-201ENST00000306726 AJUBAQ96IF1 538 aa10.98□□□□□ -0.65
PTPN9-201ENST00000306726 UBE2E1P51965 193 aa10.98□□□□□ -0.65
PTPN9-201ENST00000306726 UBE2E2Q96LR5 201 aa10.98□□□□□ -0.65
PTPN9-201ENST00000306726 TM2D2Q9BX73 214 aa10.98□□□□□ -0.65
PTPN9-201ENST00000306726 MINOS1Q5TGZ0 78 aa10.97□□□□□ -0.65
PTPN9-201ENST00000306726 NFE4Q86UQ8 179 aa10.97□□□□□ -0.65
PTPN9-201ENST00000306726 ANKRD29Q8N6D5 301 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms