RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 RAI1Q7Z5J4 1906 aaPredicted RBP8.36□□□□□ -1.07
PCDHGC4-201ENST00000306593 TRAV13-1A0A0B4J241 112 aa8.36□□□□□ -1.07
PCDHGC4-201ENST00000306593 TP53TG1Q9Y2A0 90 aa8.36□□□□□ -1.07
PCDHGC4-201ENST00000306593 SDHAF1A6NFY7 115 aa8.36□□□□□ -1.07
PCDHGC4-201ENST00000306593 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
PCDHGC4-201ENST00000306593 MRPL35Q9NZE8 188 aaKnown RBP8.36□□□□□ -1.07
PCDHGC4-201ENST00000306593 MUC3AQ02505 3323 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 PHLDA1Q8WV24 401 aaPredicted RBP8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 KNCNA6PVL3 124 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 I3L3M4 83 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 ZNF80P51504 273 aaPredicted RBP8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 NPC2P61916 151 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 DEFB113Q30KQ7 82 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 CRIP1P50238 77 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 CDSNQ15517 529 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 MRGPRG-AS1Q2M3A8 158 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 GATD1Q8NB37 220 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 DKK2Q9UBU2 259 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 SMAD5-AS1Q9Y6J3 95 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 U3KQK5 164 aa8.35□□□□□ -1.07
PCDHGC4-201ENST00000306593 C9orf118A6NHY6 69 aa8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 F6UB75 175 aa8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 HOXD3P31249 432 aaPredicted RBP8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 SPAG8Q99932 426 aaPredicted RBP8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 CEP295Q9C0D2 2601 aa8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 CDK2AP2O75956 126 aa8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 LINC01548A6NM66 108 aa8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 MRPS12O15235 138 aaKnown RBP8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 DEFB125Q8N687 156 aa8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 GNRH2O43555 120 aa8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 CFHR3Q02985 330 aa8.34□□□□□ -1.07
PCDHGC4-201ENST00000306593 RHOHQ15669 191 aa8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 UNQ9165/PRO28630Q6UXU0 137 aa8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 FLNBO75369 2602 aaKnown RBP8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 MYMXA0A1B0GTQ4 84 aa8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 RNF152Q8N8N0 203 aa8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 IGHG4P01861 327 aa8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 LOXL1Q08397 574 aaPredicted RBP8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 SPXQ9BT56 116 aa8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 KLK9Q9UKQ9 250 aa8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 GATA1P15976 413 aaPredicted RBP8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 PTPRBP23467 1997 aa8.33□□□□□ -1.08
PCDHGC4-201ENST00000306593 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.32□□□□□ -1.08
PCDHGC4-201ENST00000306593 TRAV12-1A0A0B4J245 112 aa8.32□□□□□ -1.08
PCDHGC4-201ENST00000306593 NPSP0C0P6 89 aa8.32□□□□□ -1.08
PCDHGC4-201ENST00000306593 ACANP16112 2415 aa8.32□□□□□ -1.08
PCDHGC4-201ENST00000306593 LINC00310P59036 64 aa8.32□□□□□ -1.08
PCDHGC4-201ENST00000306593 MORN3Q6PF18 240 aaPredicted RBP8.32□□□□□ -1.08
PCDHGC4-201ENST00000306593 ODF3Q96PU9 254 aa8.32□□□□□ -1.08
PCDHGC4-201ENST00000306593 PLXNB1O43157 2135 aa8.32□□□□□ -1.08
PCDHGC4-201ENST00000306593 TRAV12-2A0A075B6T6 113 aa8.31□□□□□ -1.08
PCDHGC4-201ENST00000306593 DAD1P61803 113 aa8.31□□□□□ -1.08
PCDHGC4-201ENST00000306593 COX8CQ7Z4L0 72 aa8.31□□□□□ -1.08
PCDHGC4-201ENST00000306593 TRBV12-3P01733 135 aa8.31□□□□□ -1.08
PCDHGC4-201ENST00000306593 CRIP2P52943 208 aaPredicted RBP8.31□□□□□ -1.08
PCDHGC4-201ENST00000306593 LAMTOR3Q9UHA4 124 aa8.31□□□□□ -1.08
PCDHGC4-201ENST00000306593 GAGE12BA1L429 117 aa8.31□□□□□ -1.08
PCDHGC4-201ENST00000306593 ANKRD39Q53RE8 183 aa8.31□□□□□ -1.08
PCDHGC4-201ENST00000306593 LRRC75A-AS1Q8N1F1 130 aa8.31□□□□□ -1.08
PCDHGC4-201ENST00000306593 HIGD1BQ9P298 99 aa8.31□□□□□ -1.08
PCDHGC4-201ENST00000306593 TRAV8-2A0A0B4J237 113 aa8.3□□□□□ -1.08
PCDHGC4-201ENST00000306593 ZNF625Q96I27 306 aaPredicted RBP8.3□□□□□ -1.08
PCDHGC4-201ENST00000306593 F8WEM9 126 aa8.3□□□□□ -1.08
PCDHGC4-201ENST00000306593 M0R2P5 195 aa8.3□□□□□ -1.08
PCDHGC4-201ENST00000306593 CEND1Q8N111 149 aa8.3□□□□□ -1.08
PCDHGC4-201ENST00000306593 PRB1P04280 392 aa8.3□□□□□ -1.08
PCDHGC4-201ENST00000306593 GAGE13Q4V321 117 aa8.3□□□□□ -1.08
PCDHGC4-201ENST00000306593 COL27A1Q8IZC6 1860 aaPredicted RBP8.29□□□□□ -1.08
PCDHGC4-201ENST00000306593 BRI3O95415 125 aa8.29□□□□□ -1.08
PCDHGC4-201ENST00000306593 CNFNQ9BYD5 112 aa8.29□□□□□ -1.08
PCDHGC4-201ENST00000306593 TET2Q6N021 2002 aaPredicted RBP8.29□□□□□ -1.08
PCDHGC4-201ENST00000306593 IGHV3-16A0A0C4DH30 117 aa8.29□□□□□ -1.08
PCDHGC4-201ENST00000306593 LGALS9O00182 355 aa8.29□□□□□ -1.08
PCDHGC4-201ENST00000306593 TOMM6Q96B49 74 aa8.29□□□□□ -1.08
PCDHGC4-201ENST00000306593 U3KQE9 123 aa8.29□□□□□ -1.08
PCDHGC4-201ENST00000306593 VWC2LB2RUY7 222 aa8.29□□□□□ -1.08
PCDHGC4-201ENST00000306593 PRSS29PA6NIE9 313 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 ODF1Q14990 250 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 FRYQ5TBA9 3013 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 PRRC2AP48634 2157 aaKnown RBP8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 GAGE12JA6NER3 117 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 K7EP34 96 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 GAGE4Q13068 117 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 GAGE5Q13069 117 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 SUMO4Q6EEV6 95 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 IGHV4OR15-8A0A075B7B6 117 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 A0A087WW49 117 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 F8W735 103 aaPredicted RBP8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 PRIMA1Q86XR5 153 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 PCP2Q8IVA1 136 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 A0A0J9YX75 114 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 ERG28Q9UKR5 140 aa8.28□□□□□ -1.08
PCDHGC4-201ENST00000306593 CLPSL1A2RUU4 121 aa8.27□□□□□ -1.09
PCDHGC4-201ENST00000306593 ZNF561-AS1K7EIQ3 104 aa8.27□□□□□ -1.09
PCDHGC4-201ENST00000306593 NEGR1Q7Z3B1 354 aa8.27□□□□□ -1.09
PCDHGC4-201ENST00000306593 NAA38Q9BRA0 125 aaKnown RBP8.27□□□□□ -1.09
PCDHGC4-201ENST00000306593 GAGE7O76087 117 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms