RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 OR11H1Q8NG94 326 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 OR11H2Q8NH07 326 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 RNF183Q96D59 192 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 TIMM17AQ99595 171 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 TMEM160Q9NX00 188 aa4.01□□□□□ -1.77
VPS50-202ENST00000305866 NCOR1O75376 2440 aa4□□□□□ -1.77
VPS50-202ENST00000305866 C19orf84I3L1E1 186 aa4□□□□□ -1.77
VPS50-202ENST00000305866 BPESC1Q9GZL8 116 aa4□□□□□ -1.77
VPS50-202ENST00000305866 DPH3P1Q9H4G8 78 aa4□□□□□ -1.77
VPS50-202ENST00000305866 MRPL16Q9NX20 251 aaKnown RBP4□□□□□ -1.77
VPS50-202ENST00000305866 RHODO00212 210 aa4□□□□□ -1.77
VPS50-202ENST00000305866 TMEM141Q96I45 108 aa4□□□□□ -1.77
VPS50-202ENST00000305866 NCBP2LA6PVI3 153 aaKnown RBP4□□□□□ -1.77
VPS50-202ENST00000305866 G3V318 75 aa4□□□□□ -1.77
VPS50-202ENST00000305866 SYT8Q8NBV8 401 aa4□□□□□ -1.77
VPS50-202ENST00000305866 TPPP3Q9BW30 176 aa4□□□□□ -1.77
VPS50-202ENST00000305866 LYSTQ99698 3801 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 IGHV3OR16-8A0A075B7F1 116 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 RBMY1A1P0DJD3 496 aaKnown RBP3.99□□□□□ -1.77
VPS50-202ENST00000305866 RBMY1CP0DJD4 496 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 RBMY1FQ15415 496 aaKnown RBP3.99□□□□□ -1.77
VPS50-202ENST00000305866 C2orf66Q6UXQ4 117 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 CLEC19AQ6UXS0 136 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 JPT2Q9H910 190 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 POLEQ07864 2286 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 A0A0B4J2C4 111 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 ARL3P36405 182 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 Q6Q795 121 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 ANKRD29Q8N6D5 301 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 IL17DQ8TAD2 202 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 PIMREGQ9BSJ6 248 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 NIPBLQ6KC79 2804 aaeCLIP3.99□□□□□ -1.77
VPS50-202ENST00000305866 SPTBN2O15020 2390 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 M0QY20 66 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 GNRH2O43555 120 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 CKS1BP61024 79 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 RPL39P62891 51 aaKnown RBP3.99□□□□□ -1.77
VPS50-202ENST00000305866 RHOHQ15669 191 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 CYSLTR1Q9Y271 337 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 PYGO1Q9Y3Y4 419 aa3.99□□□□□ -1.77
VPS50-202ENST00000305866 URB1O60287 2271 aaKnown RBP3.98□□□□□ -1.77
VPS50-202ENST00000305866 H3BVH4 76 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 K7EQG2 157 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 HOXA3O43365 443 aaPredicted RBP3.98□□□□□ -1.77
VPS50-202ENST00000305866 HES1Q14469 280 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 ANXA2RQ3ZCQ2 193 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 PAPPA-AS1Q5QFB9 102 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 ADAMTSL4-AS1Q5T5F5 129 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 SUMO4Q6EEV6 95 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.98□□□□□ -1.77
VPS50-202ENST00000305866 AP1S3Q96PC3 154 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 DAZ1Q9NQZ3 744 aaKnown RBP3.98□□□□□ -1.77
VPS50-202ENST00000305866 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 SH3BGRL2Q9UJC5 107 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 IGHV3-16A0A0C4DH30 117 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 IGHV4-61A0A0C4DH41 118 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 ORM1P02763 201 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 ZNF22P17026 224 aaPredicted RBP3.98□□□□□ -1.77
VPS50-202ENST00000305866 Q5PR19 223 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 Q9UF83 564 aa3.98□□□□□ -1.77
VPS50-202ENST00000305866 APOMO95445 188 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 MSMBP08118 114 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 ASIPP42127 132 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 LRRC75A-AS1Q8N1F1 130 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 PPDPFLQ8WWR9 84 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 UFC1Q9Y3C8 167 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 TIMM8BQ9Y5J9 83 aaPredicted RBP3.97□□□□□ -1.77
VPS50-202ENST00000305866 ZANQ9Y493 2812 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 IGLV5-45A0A087WSX0 123 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 TRAV4A0A0B4J268 109 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 IGHV3-66A0A0C4DH42 116 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 PRSS1P07477 247 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 OR10J6PQ8NGY7 276 aa3.97□□□□□ -1.77
VPS50-202ENST00000305866 CITED2Q99967 270 aaPredicted RBP3.97□□□□□ -1.77
VPS50-202ENST00000305866 GEMIN7Q9H840 131 aaKnown RBP3.97□□□□□ -1.77
VPS50-202ENST00000305866 TRBV30A0A0K0K1B3 111 aa3.96□□□□□ -1.77
VPS50-202ENST00000305866 MRPS36P82909 103 aaKnown RBP3.96□□□□□ -1.77
VPS50-202ENST00000305866 RPL24P83731 157 aaKnown RBP3.96□□□□□ -1.77
VPS50-202ENST00000305866 TRPT1Q86TN4 253 aaKnown RBP3.96□□□□□ -1.77
VPS50-202ENST00000305866 Q6YL49 198 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 SMCR5Q8TEV8 140 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 HIST1H4GQ99525 98 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 OPRPNQ99935 248 aaPredicted RBP3.96□□□□□ -1.78
VPS50-202ENST00000305866 SPANXDQ9BXN6 97 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 SPANXCQ9NY87 97 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 PKDREJQ9NTG1 2253 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 IGLV4-3A0A075B6K6 122 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 IGHV3-35A0A0C4DH35 117 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 SDHAF1A6NFY7 115 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 F6UB75 175 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 H7C423 109 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 ZNF688P0C7X2 276 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 HIST1H4AP62805 103 aaKnown RBP3.96□□□□□ -1.78
VPS50-202ENST00000305866 ECSCRQ19T08 205 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 C16orf92Q96LL3 132 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 LINC01587Q99440 93 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 KLK15Q9H2R5 256 aa3.96□□□□□ -1.78
VPS50-202ENST00000305866 PRRC2AP48634 2157 aaKnown RBP3.96□□□□□ -1.78
VPS50-202ENST00000305866 A0A1B0GV72 72 aa3.95□□□□□ -1.78
VPS50-202ENST00000305866 B4DSR2 109 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms