RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 DEFB105AQ8NG35 78 aa10.75□□□□□ -0.69
PRKCB-201ENST00000303531 IGLV10-54A0A075B6I4 117 aa10.74□□□□□ -0.69
PRKCB-201ENST00000303531 DAZ2Q13117 558 aaKnown RBP10.74□□□□□ -0.69
PRKCB-201ENST00000303531 MSMPQ1L6U9 139 aa10.74□□□□□ -0.69
PRKCB-201ENST00000303531 DAZ4Q86SG3 579 aaKnown RBP10.74□□□□□ -0.69
PRKCB-201ENST00000303531 DAZ3Q9NR90 486 aaKnown RBP10.74□□□□□ -0.69
PRKCB-201ENST00000303531 CGB7P0DN87 165 aa10.74□□□□□ -0.69
PRKCB-201ENST00000303531 FXYD2P54710 66 aa10.74□□□□□ -0.69
PRKCB-201ENST00000303531 ATP6V0E2Q8NHE4 81 aa10.74□□□□□ -0.69
PRKCB-201ENST00000303531 C11orf1Q9H5F2 150 aa10.74□□□□□ -0.69
PRKCB-201ENST00000303531 BAALCQ8WXS3 180 aa10.74□□□□□ -0.69
PRKCB-201ENST00000303531 DEFB1P60022 68 aa10.74□□□□□ -0.69
PRKCB-201ENST00000303531 NRGNQ92686 78 aa10.74□□□□□ -0.69
PRKCB-201ENST00000303531 ZFHX2Q9C0A1 2572 aaPredicted RBP10.73□□□□□ -0.69
PRKCB-201ENST00000303531 CTRLP40313 264 aa10.73□□□□□ -0.69
PRKCB-201ENST00000303531 SND1-IT1Q9HBX3 110 aa10.73□□□□□ -0.69
PRKCB-201ENST00000303531 ICOSQ9Y6W8 199 aa10.73□□□□□ -0.69
PRKCB-201ENST00000303531 IGHV4-4A0A075B6R2 117 aa10.73□□□□□ -0.69
PRKCB-201ENST00000303531 MRAPQ8TCY5 172 aa10.73□□□□□ -0.69
PRKCB-201ENST00000303531 PIFOQ8TCI5 191 aa10.73□□□□□ -0.69
PRKCB-201ENST00000303531 TOMM6Q96B49 74 aa10.73□□□□□ -0.69
PRKCB-201ENST00000303531 C2orf70A6NJV1 201 aa10.73□□□□□ -0.69
PRKCB-201ENST00000303531 SPRY4Q9C004 299 aa10.73□□□□□ -0.69
PRKCB-201ENST00000303531 WISP2O76076 250 aa10.73□□□□□ -0.69
PRKCB-201ENST00000303531 UBE2BP63146 152 aa10.72□□□□□ -0.69
PRKCB-201ENST00000303531 C1orf43Q9BWL3 253 aa10.72□□□□□ -0.69
PRKCB-201ENST00000303531 C9orf66Q5T8R8 295 aa10.72□□□□□ -0.69
PRKCB-201ENST00000303531 ZMAT4Q9H898 229 aa10.72□□□□□ -0.69
PRKCB-201ENST00000303531 MUC6Q6W4X9 2439 aa10.72□□□□□ -0.69
PRKCB-201ENST00000303531 HIST2H2BCQ6DN03 193 aa10.72□□□□□ -0.69
PRKCB-201ENST00000303531 DAND5Q8N907 189 aa10.72□□□□□ -0.69
PRKCB-201ENST00000303531 PRB1P04280 392 aa10.71□□□□□ -0.69
PRKCB-201ENST00000303531 COX7B2Q8TF08 81 aa10.71□□□□□ -0.69
PRKCB-201ENST00000303531 K7EMT4 169 aa10.71□□□□□ -0.7
PRKCB-201ENST00000303531 OBSL1O75147 1896 aa10.71□□□□□ -0.7
PRKCB-201ENST00000303531 COX7A2LO14548 114 aa10.71□□□□□ -0.7
PRKCB-201ENST00000303531 RPL18AQ02543 176 aaKnown RBP10.71□□□□□ -0.7
PRKCB-201ENST00000303531 TNRC6AQ8NDV7 1962 aaKnown RBP10.71□□□□□ -0.7
PRKCB-201ENST00000303531 ZNF503Q96F45 646 aa10.7□□□□□ -0.7
PRKCB-201ENST00000303531 CAMK2N2Q96S95 79 aa10.7□□□□□ -0.7
PRKCB-201ENST00000303531 HIGD1BQ9P298 99 aa10.7□□□□□ -0.7
PRKCB-201ENST00000303531 ACACBO00763 2458 aa10.7□□□□□ -0.7
PRKCB-201ENST00000303531 MRPL23Q16540 153 aaKnown RBP10.7□□□□□ -0.7
PRKCB-201ENST00000303531 ESM1Q9NQ30 184 aa10.7□□□□□ -0.7
PRKCB-201ENST00000303531 ATP5G1P05496 136 aa10.7□□□□□ -0.7
PRKCB-201ENST00000303531 ACYP1P07311 99 aa10.7□□□□□ -0.7
PRKCB-201ENST00000303531 TRBV7-3A0A075B6L6 115 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 TRBV6-1A0A0K0K1D8 114 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 C19orf71A6NCJ1 209 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 IGHV3-30P01768 117 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 IGHV3-33P01772 117 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 IGHV3-30-5P0DP03 117 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 MED14OSP0DP75 135 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 GPHB5Q86YW7 130 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 E9PLD3 99 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 SPART-AS1P0CW21 52 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 FANCD2OSQ96PS1 177 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 TIMM17AQ99595 171 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 TTC28Q96AY4 2481 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 UNQ9165/PRO28630Q6UXU0 137 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 SIRPDQ9H106 197 aa10.69□□□□□ -0.7
PRKCB-201ENST00000303531 IGKV1D-37A0A075B6S9 117 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 H0YGX0 51 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 TAX1BP3O14907 124 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 P0C879 139 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 TRBV12-3P01733 135 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 IGHG2P01859 326 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 ODF1Q14990 250 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 SONP18583 2426 aaKnown RBP10.68□□□□□ -0.7
PRKCB-201ENST00000303531 WFDC2Q14508 124 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 CITED2Q99967 270 aaPredicted RBP10.68□□□□□ -0.7
PRKCB-201ENST00000303531 C11orf86A6NJI1 115 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 C2orf16Q68DN1 1984 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 LINC01620Q4KN68 170 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 PRR14LQ5THK1 2151 aa10.68□□□□□ -0.7
PRKCB-201ENST00000303531 PLA2G5P39877 138 aa10.67□□□□□ -0.7
PRKCB-201ENST00000303531 SORL1Q92673 2214 aa10.67□□□□□ -0.7
PRKCB-201ENST00000303531 ETDCA0A1B0GVM5 59 aa10.67□□□□□ -0.7
PRKCB-201ENST00000303531 B5MCH6 92 aa10.67□□□□□ -0.7
PRKCB-201ENST00000303531 DAZAP2Q15038 168 aaPredicted RBP10.67□□□□□ -0.7
PRKCB-201ENST00000303531 TEN1Q86WV5 123 aa10.67□□□□□ -0.7
PRKCB-201ENST00000303531 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
PRKCB-201ENST00000303531 Q6ZPA2 131 aa10.66□□□□□ -0.7
PRKCB-201ENST00000303531 HHLA3Q9XRX5 114 aa10.66□□□□□ -0.7
PRKCB-201ENST00000303531 DENND4AQ7Z401 1863 aa10.66□□□□□ -0.7
PRKCB-201ENST00000303531 PTPN13Q12923 2485 aa10.65□□□□□ -0.7
PRKCB-201ENST00000303531 OPRPNQ99935 248 aaPredicted RBP10.65□□□□□ -0.7
PRKCB-201ENST00000303531 ADAMTS9Q9P2N4 1935 aa10.65□□□□□ -0.7
PRKCB-201ENST00000303531 NDUFS5O43920 106 aa10.65□□□□□ -0.7
PRKCB-201ENST00000303531 VSIG2Q96IQ7 327 aa10.65□□□□□ -0.7
PRKCB-201ENST00000303531 FUSP35637 526 aaKnown RBP eCLIP10.65□□□□□ -0.712e-6■□□□□ 11
PRKCB-201ENST00000303531 BRWD1-AS2P59051 145 aa10.65□□□□□ -0.71
PRKCB-201ENST00000303531 RBM3P98179 157 aaKnown RBP10.65□□□□□ -0.71
PRKCB-201ENST00000303531 RNASE8Q8TDE3 154 aaKnown RBP10.64□□□□□ -0.71
PRKCB-201ENST00000303531 MED12LQ86YW9 2145 aa10.64□□□□□ -0.71
PRKCB-201ENST00000303531 PROP1O75360 226 aa10.64□□□□□ -0.71
PRKCB-201ENST00000303531 C4orf3Q8WVX3 66 aa10.64□□□□□ -0.71
PRKCB-201ENST00000303531 LOXL1Q08397 574 aaPredicted RBP10.63□□□□□ -0.71
PRKCB-201ENST00000303531 LINC00322Q6ZN03 302 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms