RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 ASIPP42127 132 aa8.32□□□□□ -1.08
SNX20-201ENST00000300590 ZNRF2Q8NHG8 242 aa8.32□□□□□ -1.08
SNX20-201ENST00000300590 MAP1AP78559 2803 aaPredicted RBP8.32□□□□□ -1.08
SNX20-201ENST00000300590 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
SNX20-201ENST00000300590 FOXC1Q12948 553 aa8.32□□□□□ -1.08
SNX20-201ENST00000300590 PMVKQ15126 192 aa8.32□□□□□ -1.08
SNX20-201ENST00000300590 TLN1Q9Y490 2541 aaKnown RBP8.31□□□□□ -1.08
SNX20-201ENST00000300590 CENPVL3A0A0U1RRI6 287 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 SBSPONQ8IVN8 264 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 NPBQ8NG41 125 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 METTL26Q96S19 204 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 ZFAND3Q9H8U3 227 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 ZNF580Q9UK33 172 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 IGHV7-81A0A0B4J1V7 117 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 LOC107984640A0A0U1RRK4 108 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
SNX20-201ENST00000300590 LINC01620Q4KN68 170 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 LINC01560Q8TB33 94 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 FAM57AQ8TBR7 257 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 CLPSL1A2RUU4 121 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 RBAKDNA6NC62 111 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 C20orf173Q96LM9 149 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 DUX3Q96PT4 197 aa8.31□□□□□ -1.08
SNX20-201ENST00000300590 C9orf153Q5TBE3 101 aa8.3□□□□□ -1.08
SNX20-201ENST00000300590 RNF223E7ERA6 249 aa8.3□□□□□ -1.08
SNX20-201ENST00000300590 C2orf82Q6UX34 121 aa8.3□□□□□ -1.08
SNX20-201ENST00000300590 Q6ZSV7 163 aa8.3□□□□□ -1.08
SNX20-201ENST00000300590 ODF3Q96PU9 254 aa8.29□□□□□ -1.08
SNX20-201ENST00000300590 AKAP13Q12802 2813 aa8.29□□□□□ -1.08
SNX20-201ENST00000300590 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.29□□□□□ -1.08
SNX20-201ENST00000300590 ATP6V0E1O15342 81 aa8.29□□□□□ -1.08
SNX20-201ENST00000300590 LINC00694P0DN24 101 aa8.29□□□□□ -1.08
SNX20-201ENST00000300590 IGHV4-4A0A075B6R2 117 aa8.29□□□□□ -1.08
SNX20-201ENST00000300590 GPHB5Q86YW7 130 aa8.29□□□□□ -1.08
SNX20-201ENST00000300590 MUC4Q99102 2169 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 TRAV21A0A0B4J279 112 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 ATXN8Q156A1 80 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 C9orf47Q6ZRZ4 202 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 VMO1Q7Z5L0 202 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 CCDC140Q96MF4 163 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.28□□□□□ -1.08
SNX20-201ENST00000300590 SDHAF1A6NFY7 115 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 H3BMM0 161 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 PAPPA-AS1Q5QFB9 102 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 UBE2WQ96B02 151 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 SPXQ9BT56 116 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 IGIPA6NJ69 53 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 CD3EP07766 207 aa8.28□□□□□ -1.08
SNX20-201ENST00000300590 TMEM263Q8WUH6 116 aaKnown RBP8.28□□□□□ -1.08
SNX20-201ENST00000300590 ZFAND2AQ8N6M9 145 aa8.27□□□□□ -1.09
SNX20-201ENST00000300590 CLEC2BQ92478 149 aa8.27□□□□□ -1.09
SNX20-201ENST00000300590 COL12A1Q99715 3063 aa8.27□□□□□ -1.09
SNX20-201ENST00000300590 FAM236AA0A1B0GUQ0 79 aa8.27□□□□□ -1.09
SNX20-201ENST00000300590 FAM236BA0A1B0GV22 79 aa8.27□□□□□ -1.09
SNX20-201ENST00000300590 TRIAP1O43715 76 aa8.27□□□□□ -1.09
SNX20-201ENST00000300590 C5orf47Q569G3 176 aa8.27□□□□□ -1.09
SNX20-201ENST00000300590 CSDC2Q9Y534 153 aaKnown RBP8.27□□□□□ -1.09
SNX20-201ENST00000300590 A0A0J9YXV3 536 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 B9A039 149 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 TMEM126AQ9H061 195 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 OTOGLQ3ZCN5 2332 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 NOTCH3Q9UM47 2321 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 OOSP1A8MZH6 123 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 IGKV3-20P01619 116 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 SUMO4Q6EEV6 95 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 ZFHX2Q9C0A1 2572 aaPredicted RBP8.26□□□□□ -1.09
SNX20-201ENST00000300590 CELSR1Q9NYQ6 3014 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 RNASE3P12724 160 aaKnown RBP8.26□□□□□ -1.09
SNX20-201ENST00000300590 RNASE13Q5GAN3 156 aaKnown RBP8.26□□□□□ -1.09
SNX20-201ENST00000300590 Q8N9W7 124 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 AMELXQ99217 191 aa8.26□□□□□ -1.09
SNX20-201ENST00000300590 KLK5Q9Y337 293 aaPredicted RBP8.26□□□□□ -1.09
SNX20-201ENST00000300590 PRRC2AP48634 2157 aaKnown RBP8.25□□□□□ -1.09
SNX20-201ENST00000300590 NACAE9PAV3 2078 aa8.25□□□□□ -1.09
SNX20-201ENST00000300590 DOPEY2Q9Y3R5 2298 aa8.25□□□□□ -1.09
SNX20-201ENST00000300590 VCYO14598 125 aa8.25□□□□□ -1.09
SNX20-201ENST00000300590 UBE2E1P51965 193 aa8.25□□□□□ -1.09
SNX20-201ENST00000300590 PLA2G2CQ5R387 149 aa8.25□□□□□ -1.09
SNX20-201ENST00000300590 TMEM219Q86XT9 240 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 EDA2RQ9HAV5 297 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 TRAV8-3A0A0A6YYJ7 113 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 TRBV10-2A0A0K0K1G8 114 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 IGHV3-11P01762 117 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 GRNP28799 593 aaKnown RBP8.24□□□□□ -1.09
SNX20-201ENST00000300590 ZNF876PQ49A33 203 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 UNQ9165/PRO28630Q6UXU0 137 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 EEF1AKMT3Q96AZ1 226 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 TRGV11A0A075B6L2 103 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 A8MZ25 164 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 ZNF22P17026 224 aaPredicted RBP8.24□□□□□ -1.09
SNX20-201ENST00000300590 LINC00477Q96M19 166 aa8.24□□□□□ -1.09
SNX20-201ENST00000300590 TRAV12-3A0A0B4J271 114 aa8.23□□□□□ -1.09
SNX20-201ENST00000300590 LGALS9O00182 355 aa8.23□□□□□ -1.09
SNX20-201ENST00000300590 TRBV12-3P01733 135 aa8.23□□□□□ -1.09
SNX20-201ENST00000300590 PRR30Q53SZ7 412 aaPredicted RBP8.23□□□□□ -1.09
SNX20-201ENST00000300590 FAM110DQ8TAY7 271 aaPredicted RBP8.23□□□□□ -1.09
SNX20-201ENST00000300590 C2CD3Q4AC94 2353 aa8.23□□□□□ -1.09
SNX20-201ENST00000300590 RPL13AP40429 203 aaKnown RBP8.23□□□□□ -1.09
SNX20-201ENST00000300590 DAND5Q8N907 189 aa8.23□□□□□ -1.09
SNX20-201ENST00000300590 SPANXA1Q9NS26 97 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms