RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 PPDPFLQ8WWR9 84 aa10.22□□□□□ -0.77
CTDP1-202ENST00000299543 LAGE3Q14657 143 aa10.22□□□□□ -0.77
CTDP1-202ENST00000299543 MEIG1Q5JSS6 88 aa10.22□□□□□ -0.77
CTDP1-202ENST00000299543 Q8N8P6 123 aa10.22□□□□□ -0.77
CTDP1-202ENST00000299543 TRAV4A0A0B4J268 109 aa10.22□□□□□ -0.77
CTDP1-202ENST00000299543 IGHV7-4-1A0A0J9YVY3 117 aa10.22□□□□□ -0.77
CTDP1-202ENST00000299543 Q6ZS46 218 aa10.22□□□□□ -0.77
CTDP1-202ENST00000299543 CFAP46Q8IYW2 2715 aa10.21□□□□□ -0.77
CTDP1-202ENST00000299543 RBAKDNA6NC62 111 aa10.21□□□□□ -0.77
CTDP1-202ENST00000299543 IGKV3-20P01619 116 aa10.21□□□□□ -0.77
CTDP1-202ENST00000299543 FAM110AQ9BQ89 295 aa10.21□□□□□ -0.77
CTDP1-202ENST00000299543 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
CTDP1-202ENST00000299543 C9JAW5 83 aa10.21□□□□□ -0.78
CTDP1-202ENST00000299543 GNRH2O43555 120 aa10.21□□□□□ -0.78
CTDP1-202ENST00000299543 ITLN2Q8WWU7 325 aaPredicted RBP10.21□□□□□ -0.78
CTDP1-202ENST00000299543 CNFNQ9BYD5 112 aa10.21□□□□□ -0.78
CTDP1-202ENST00000299543 ZANQ9Y493 2812 aa10.2□□□□□ -0.78
CTDP1-202ENST00000299543 ZNF688P0C7X2 276 aa10.2□□□□□ -0.78
CTDP1-202ENST00000299543 RPL39LQ96EH5 51 aaKnown RBP10.2□□□□□ -0.78
CTDP1-202ENST00000299543 IGHV1-69DA0A0B4J2H0 117 aa10.2□□□□□ -0.78
CTDP1-202ENST00000299543 ZNF815PA8K554 130 aa10.2□□□□□ -0.78
CTDP1-202ENST00000299543 IGHV1-69P01742 117 aa10.2□□□□□ -0.78
CTDP1-202ENST00000299543 LRRK2Q5S007 2527 aa10.2□□□□□ -0.78
CTDP1-202ENST00000299543 SETD2Q9BYW2 2564 aaPredicted RBP10.2□□□□□ -0.78
CTDP1-202ENST00000299543 MRPL23Q16540 153 aaKnown RBP10.2□□□□□ -0.78
CTDP1-202ENST00000299543 ANKRD29Q8N6D5 301 aa10.2□□□□□ -0.78
CTDP1-202ENST00000299543 KLHL30-AS1Q8NEE0 82 aa10.2□□□□□ -0.78
CTDP1-202ENST00000299543 ATP5J2P56134 94 aa10.19□□□□□ -0.78
CTDP1-202ENST00000299543 SRSF1Q07955 248 aaKnown RBP eCLIP10.19□□□□□ -0.78
CTDP1-202ENST00000299543 C9orf47Q6ZRZ4 202 aa10.19□□□□□ -0.78
CTDP1-202ENST00000299543 HIGD1BQ9P298 99 aa10.19□□□□□ -0.78
CTDP1-202ENST00000299543 ATP5LO75964 103 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 IFITM1P13164 125 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 EDN2P20800 178 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 NDUFV3P56181 108 aaKnown RBP10.18□□□□□ -0.78
CTDP1-202ENST00000299543 SCGB3A1Q96QR1 104 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 C9orf139Q6ZV77 190 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 NRACQ8N912 160 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 PIFOQ8TCI5 191 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 RHPN1-AS1Q9BWJ2 59 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 CUBNO60494 3623 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 PTPN13Q12923 2485 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 F5H697 171 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 SRSF2Q01130 221 aaKnown RBP10.18□□□□□ -0.78
CTDP1-202ENST00000299543 TEN1Q86WV5 123 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 ABCA12Q86UK0 2595 aa10.18□□□□□ -0.78
CTDP1-202ENST00000299543 CSMD2Q7Z408 3487 aa10.17□□□□□ -0.78
CTDP1-202ENST00000299543 ASIPP42127 132 aa10.17□□□□□ -0.78
CTDP1-202ENST00000299543 CCL19Q99731 98 aa10.17□□□□□ -0.78
CTDP1-202ENST00000299543 TRAV21A0A0B4J279 112 aa10.17□□□□□ -0.78
CTDP1-202ENST00000299543 YAE1D1Q9NRH1 226 aa10.17□□□□□ -0.78
CTDP1-202ENST00000299543 NRGNQ92686 78 aa10.17□□□□□ -0.78
CTDP1-202ENST00000299543 PIMREGQ9BSJ6 248 aa10.17□□□□□ -0.78
CTDP1-202ENST00000299543 FAM223BA6NKX1 122 aa10.16□□□□□ -0.78
CTDP1-202ENST00000299543 FAM223AQ8IWN6 122 aa10.16□□□□□ -0.78
CTDP1-202ENST00000299543 IGLV2-18A0A075B6J9 118 aa10.16□□□□□ -0.78
CTDP1-202ENST00000299543 TRBV7-3A0A075B6L6 115 aa10.16□□□□□ -0.78
CTDP1-202ENST00000299543 TCL1BO95988 128 aa10.16□□□□□ -0.78
CTDP1-202ENST00000299543 CRIP2P52943 208 aaPredicted RBP10.16□□□□□ -0.78
CTDP1-202ENST00000299543 LINC00477Q96M19 166 aa10.16□□□□□ -0.78
CTDP1-202ENST00000299543 U3KQE9 123 aa10.16□□□□□ -0.78
CTDP1-202ENST00000299543 SONP18583 2426 aaKnown RBP10.16□□□□□ -0.78
CTDP1-202ENST00000299543 SLC25A16P16260 332 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 GPHB5Q86YW7 130 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 ZFAND2AQ8N6M9 145 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 NTN5Q8WTR8 489 aaPredicted RBP10.15□□□□□ -0.78
CTDP1-202ENST00000299543 SMIM2Q9BVW6 85 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 JPT2Q9H910 190 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 IGHV4-30-2A0A087WSY4 118 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 M0QXV9 152 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 SUMO2P61956 95 aaKnown RBP10.15□□□□□ -0.78
CTDP1-202ENST00000299543 FAM74A4Q5TZK3 123 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 TRPT1Q86TN4 253 aaKnown RBP10.15□□□□□ -0.78
CTDP1-202ENST00000299543 MAPK1IP1LQ8NDC0 245 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 PLEKHB2Q96CS7 222 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.78
CTDP1-202ENST00000299543 A0A087WWL8 130 aa10.15□□□□□ -0.79
CTDP1-202ENST00000299543 MYMXA0A1B0GTQ4 84 aa10.14□□□□□ -0.79
CTDP1-202ENST00000299543 TMEM262E9PQX1 116 aa10.14□□□□□ -0.79
CTDP1-202ENST00000299543 NDUFA4O00483 81 aa10.14□□□□□ -0.79
CTDP1-202ENST00000299543 TRAV12-3A0A0B4J271 114 aa10.14□□□□□ -0.79
CTDP1-202ENST00000299543 OVOL1O14753 267 aa10.14□□□□□ -0.79
CTDP1-202ENST00000299543 C15orf53Q8NAA6 179 aa10.14□□□□□ -0.79
CTDP1-202ENST00000299543 MRPL53Q96EL3 112 aaKnown RBP10.14□□□□□ -0.79
CTDP1-202ENST00000299543 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
CTDP1-202ENST00000299543 DPH3P1Q9H4G8 78 aa10.14□□□□□ -0.79
CTDP1-202ENST00000299543 ZMAT4Q9H898 229 aa10.14□□□□□ -0.79
CTDP1-202ENST00000299543 DOPEY1Q5JWR5 2465 aa10.14□□□□□ -0.79
CTDP1-202ENST00000299543 HTN1P15515 57 aa10.13□□□□□ -0.79
CTDP1-202ENST00000299543 RASL10AQ92737 203 aa10.13□□□□□ -0.79
CTDP1-202ENST00000299543 PRADC1Q9BSG0 188 aa10.13□□□□□ -0.79
CTDP1-202ENST00000299543 CHCHD5Q9BSY4 110 aa10.13□□□□□ -0.79
CTDP1-202ENST00000299543 A0A087WX48 190 aa10.13□□□□□ -0.79
CTDP1-202ENST00000299543 C10orf99Q6UWK7 81 aa10.13□□□□□ -0.79
CTDP1-202ENST00000299543 WNK1Q9H4A3 2382 aa10.13□□□□□ -0.79
CTDP1-202ENST00000299543 C2CD3Q4AC94 2353 aa10.13□□□□□ -0.79
CTDP1-202ENST00000299543 SLC25A20O43772 301 aa10.12□□□□□ -0.79
CTDP1-202ENST00000299543 LYRM7Q5U5X0 104 aa10.12□□□□□ -0.79
CTDP1-202ENST00000299543 DUX5Q96PT3 197 aa10.12□□□□□ -0.79
CTDP1-202ENST00000299543 NAV2Q8IVL1 2488 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms