RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 VMO1Q7Z5L0 202 aa10.17□□□□□ -0.78
RPUSD4-201ENST00000298317 KIF25-AS1Q9Y6Z4 181 aa10.17□□□□□ -0.78
RPUSD4-201ENST00000298317 OOSP1A8MZH6 123 aa10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 NXPH4O95158 308 aa10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 RNASE3P12724 160 aaKnown RBP10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 POLR2KP53803 58 aaKnown RBP10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 LINC00315P59091 139 aa10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 RPL39P62891 51 aaKnown RBP10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 ATXN8Q156A1 80 aa10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 ECSCRQ19T08 205 aa10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 LINC00477Q96M19 166 aa10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 LOC107984640A0A0U1RRK4 108 aa10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 ELANEP08246 267 aa10.16□□□□□ -0.78
RPUSD4-201ENST00000298317 C15orf53Q8NAA6 179 aa10.15□□□□□ -0.78
RPUSD4-201ENST00000298317 TACC2O95359 2948 aa10.15□□□□□ -0.78
RPUSD4-201ENST00000298317 TRAV8-4A0A0B4J246 113 aa10.15□□□□□ -0.78
RPUSD4-201ENST00000298317 CD3EP07766 207 aa10.15□□□□□ -0.78
RPUSD4-201ENST00000298317 ARHGAP32A7KAX9 2087 aa10.15□□□□□ -0.79
RPUSD4-201ENST00000298317 TRBV10-2A0A0K0K1G8 114 aa10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 TEX49A0A1B0GTD5 131 aa10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 ATP6V0E1O15342 81 aa10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 LEPROTO15243 131 aa10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 EEF1AKMT3Q96AZ1 226 aa10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 FAM19A4Q96LR4 140 aa10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 UBTD1Q9HAC8 227 aa10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 TPRP12270 2363 aaKnown RBP10.14□□□□□ -0.79
RPUSD4-201ENST00000298317 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 TMEM223A0PJW6 202 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 TCF15Q12870 199 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 MINOS1Q5TGZ0 78 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 MUSTN1Q8IVN3 82 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 LRRC75A-AS1Q8N1F1 130 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 MINOS1-NBL1R4GNA1 71 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 BSNQ9UPA5 3926 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 TRBV7-1A0A0A6YYK4 115 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 TRAV2A0A0B4J234 112 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 H7C2G1 150 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 VCYO14598 125 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 GNRH2O43555 120 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 WNK2Q9Y3S1 2297 aa10.13□□□□□ -0.79
RPUSD4-201ENST00000298317 TRBV30A0A0K0K1B3 111 aa10.12□□□□□ -0.79
RPUSD4-201ENST00000298317 H3BMM0 161 aa10.12□□□□□ -0.79
RPUSD4-201ENST00000298317 LGALS9O00182 355 aa10.12□□□□□ -0.79
RPUSD4-201ENST00000298317 OVOL1O14753 267 aa10.12□□□□□ -0.79
RPUSD4-201ENST00000298317 SUMO4Q6EEV6 95 aa10.12□□□□□ -0.79
RPUSD4-201ENST00000298317 UBE2WQ96B02 151 aa10.12□□□□□ -0.79
RPUSD4-201ENST00000298317 POLEQ07864 2286 aa10.12□□□□□ -0.79
RPUSD4-201ENST00000298317 DEFB124Q8NES8 71 aa10.12□□□□□ -0.79
RPUSD4-201ENST00000298317 A0A0J9YX75 114 aa10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 J3KT08 172 aa10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 SOCS3O14543 225 aa10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 IGHV4-39P01824 125 aa10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 Q1RN00 199 aa10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 DEFB104AQ8WTQ1 72 aa10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 TRBV27A0A0K0K1C4 114 aa10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 G3V318 75 aa10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 M0R2P5 195 aa10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 IGHV1-69P01742 117 aa10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 RNASE4P34096 147 aaKnown RBP10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 MRPL23Q16540 153 aaKnown RBP10.11□□□□□ -0.79
RPUSD4-201ENST00000298317 LAMA5O15230 3695 aa10.1□□□□□ -0.79
RPUSD4-201ENST00000298317 TRIAP1O43715 76 aa10.1□□□□□ -0.79
RPUSD4-201ENST00000298317 LY6HO94772 140 aa10.1□□□□□ -0.79
RPUSD4-201ENST00000298317 MUC4Q99102 2169 aa10.1□□□□□ -0.79
RPUSD4-201ENST00000298317 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
RPUSD4-201ENST00000298317 NPFFO15130 113 aa10.1□□□□□ -0.79
RPUSD4-201ENST00000298317 DEFB1P60022 68 aa10.1□□□□□ -0.79
RPUSD4-201ENST00000298317 FOXC1Q12948 553 aa10.1□□□□□ -0.79
RPUSD4-201ENST00000298317 TRBV6-5A0A0K0K1A5 114 aa10.09□□□□□ -0.79
RPUSD4-201ENST00000298317 PCNX1Q96RV3 2341 aa10.09□□□□□ -0.79
RPUSD4-201ENST00000298317 A0A1B0GX51 115 aa10.09□□□□□ -0.79
RPUSD4-201ENST00000298317 NDUFA7O95182 113 aa10.09□□□□□ -0.79
RPUSD4-201ENST00000298317 ZNF22P17026 224 aaPredicted RBP10.09□□□□□ -0.79
RPUSD4-201ENST00000298317 CEP250Q9BV73 2442 aa10.09□□□□□ -0.79
RPUSD4-201ENST00000298317 TMEM101Q96IK0 257 aa10.08□□□□□ -0.8
RPUSD4-201ENST00000298317 JPT2Q9H910 190 aa10.08□□□□□ -0.8
RPUSD4-201ENST00000298317 FAM240AA0A1B0GVK7 77 aa10.08□□□□□ -0.8
RPUSD4-201ENST00000298317 NSUN5P1Q3KNT7 163 aa10.08□□□□□ -0.8
RPUSD4-201ENST00000298317 A0A0J9YXY3 114 aa10.07□□□□□ -0.8
RPUSD4-201ENST00000298317 H3BT86 120 aa10.07□□□□□ -0.8
RPUSD4-201ENST00000298317 H7C423 109 aa10.07□□□□□ -0.8
RPUSD4-201ENST00000298317 C2orf82Q6UX34 121 aa10.07□□□□□ -0.8
RPUSD4-201ENST00000298317 BEX4Q9NWD9 120 aaPredicted RBP10.07□□□□□ -0.8
RPUSD4-201ENST00000298317 CNOT1A5YKK6 2376 aaKnown RBP10.07□□□□□ -0.8
RPUSD4-201ENST00000298317 OR13C6PQ8NH95 151 aa10.07□□□□□ -0.8
RPUSD4-201ENST00000298317 LITAFQ99732 161 aa10.07□□□□□ -0.8
RPUSD4-201ENST00000298317 OPRPNQ99935 248 aaPredicted RBP10.07□□□□□ -0.8
RPUSD4-201ENST00000298317 A0A087WWL8 130 aa10.06□□□□□ -0.8
RPUSD4-201ENST00000298317 HERVK_113P63121 156 aa10.06□□□□□ -0.8
RPUSD4-201ENST00000298317 RHOHQ15669 191 aa10.06□□□□□ -0.8
RPUSD4-201ENST00000298317 C9orf153Q5TBE3 101 aa10.06□□□□□ -0.8
RPUSD4-201ENST00000298317 IGHV3-64A0A075B6Q5 118 aa10.06□□□□□ -0.8
RPUSD4-201ENST00000298317 F6UB75 175 aa10.06□□□□□ -0.8
RPUSD4-201ENST00000298317 DEFB121Q5J5C9 76 aa10.06□□□□□ -0.8
RPUSD4-201ENST00000298317 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
RPUSD4-201ENST00000298317 APC2O95996 2303 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms