RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 CDSNQ15517 529 aa14.38□□□□□ -0.11
TRA2A-201ENST00000297071 SUMO4Q6EEV6 95 aa14.38□□□□□ -0.11
TRA2A-201ENST00000297071 UNQ9165/PRO28630Q6UXU0 137 aa14.38□□□□□ -0.11
TRA2A-201ENST00000297071 ARL17AQ8IVW1 177 aa14.38□□□□□ -0.11
TRA2A-201ENST00000297071 AMELXQ99217 191 aa14.38□□□□□ -0.11
TRA2A-201ENST00000297071 PRO1854Q9UHT4 67 aa14.38□□□□□ -0.11
TRA2A-201ENST00000297071 A8MWV9 139 aa14.37□□□□□ -0.11
TRA2A-201ENST00000297071 TMEM262E9PQX1 116 aa14.37□□□□□ -0.11
TRA2A-201ENST00000297071 NSUN5P1Q3KNT7 163 aa14.37□□□□□ -0.11
TRA2A-201ENST00000297071 KLHL30-AS1Q8NEE0 82 aa14.37□□□□□ -0.11
TRA2A-201ENST00000297071 ABCA4P78363 2273 aa14.37□□□□□ -0.11
TRA2A-201ENST00000297071 A0A0J9YX75 114 aa14.36□□□□□ -0.11
TRA2A-201ENST00000297071 K7EMT4 169 aa14.36□□□□□ -0.11
TRA2A-201ENST00000297071 CARD19Q96LW7 228 aa14.36□□□□□ -0.11
TRA2A-201ENST00000297071 IGF2RP11717 2491 aa14.36□□□□□ -0.11
TRA2A-201ENST00000297071 LEPROTO15243 131 aa14.36□□□□□ -0.11
TRA2A-201ENST00000297071 TCL1BO95988 128 aa14.36□□□□□ -0.11
TRA2A-201ENST00000297071 KLRB1Q12918 225 aa14.36□□□□□ -0.11
TRA2A-201ENST00000297071 FAM159AQ6UWV7 190 aa14.36□□□□□ -0.11
TRA2A-201ENST00000297071 A0A0B4J2C4 111 aa14.35□□□□□ -0.11
TRA2A-201ENST00000297071 J3KRW8 73 aa14.35□□□□□ -0.11
TRA2A-201ENST00000297071 Q6ZUT4 128 aa14.35□□□□□ -0.11
TRA2A-201ENST00000297071 J3QQQ9 107 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 IGHG2P01859 326 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 P0DMU3 169 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 FAM231AP0DMU4 169 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 FAM231CP0DMU5 169 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 ID1P41134 155 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 C9orf85Q96MD7 179 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 SPINK8P0C7L1 97 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 ZNF688P0C7X2 276 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 FOXC1Q12948 553 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 ZNF580Q9UK33 172 aa14.34□□□□□ -0.11
TRA2A-201ENST00000297071 AKAP13Q12802 2813 aa14.33□□□□□ -0.11
TRA2A-201ENST00000297071 ADGRG4Q8IZF6 3080 aa14.33□□□□□ -0.11
TRA2A-201ENST00000297071 SDHAF1A6NFY7 115 aa14.33□□□□□ -0.12
TRA2A-201ENST00000297071 LGALS3P17931 250 aaKnown RBP14.33□□□□□ -0.12
TRA2A-201ENST00000297071 TSPEAR-AS2P59090 65 aa14.33□□□□□ -0.12
TRA2A-201ENST00000297071 ZNRF2Q8NHG8 242 aa14.32□□□□□ -0.12
TRA2A-201ENST00000297071 BBC3Q96PG8 261 aaPredicted RBP14.32□□□□□ -0.12
TRA2A-201ENST00000297071 MDFICQ9P1T7 246 aa14.32□□□□□ -0.12
TRA2A-201ENST00000297071 TMEM223A0PJW6 202 aa14.31□□□□□ -0.12
TRA2A-201ENST00000297071 SPRY2O43597 315 aa14.31□□□□□ -0.12
TRA2A-201ENST00000297071 TRBV12-3P01733 135 aa14.31□□□□□ -0.12
TRA2A-201ENST00000297071 RHPN1-AS1Q9BWJ2 59 aa14.31□□□□□ -0.12
TRA2A-201ENST00000297071 GEMIN7Q9H840 131 aaKnown RBP14.31□□□□□ -0.12
TRA2A-201ENST00000297071 UCNP55089 124 aa14.31□□□□□ -0.12
TRA2A-201ENST00000297071 TMEM170BQ5T4T1 132 aa14.31□□□□□ -0.12
TRA2A-201ENST00000297071 Q6ZS46 218 aa14.31□□□□□ -0.12
TRA2A-201ENST00000297071 DAZ1Q9NQZ3 744 aaKnown RBP14.31□□□□□ -0.12
TRA2A-201ENST00000297071 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.3□□□□□ -0.12
TRA2A-201ENST00000297071 TMEM219Q86XT9 240 aa14.3□□□□□ -0.12
TRA2A-201ENST00000297071 ITPR1Q14643 2758 aa14.3□□□□□ -0.12
TRA2A-201ENST00000297071 IGSF10Q6WRI0 2623 aa14.3□□□□□ -0.12
TRA2A-201ENST00000297071 A0A1W2PPR1 153 aa14.29□□□□□ -0.12
TRA2A-201ENST00000297071 IGHV3-33P01772 117 aa14.29□□□□□ -0.12
TRA2A-201ENST00000297071 RPL39P62891 51 aaKnown RBP14.29□□□□□ -0.12
TRA2A-201ENST00000297071 TRPT1Q86TN4 253 aaKnown RBP14.29□□□□□ -0.12
TRA2A-201ENST00000297071 RNF152Q8N8N0 203 aa14.29□□□□□ -0.12
TRA2A-201ENST00000297071 BPESC1Q9GZL8 116 aa14.29□□□□□ -0.12
TRA2A-201ENST00000297071 EDA2RQ9HAV5 297 aa14.29□□□□□ -0.12
TRA2A-201ENST00000297071 F6UB75 175 aa14.29□□□□□ -0.12
TRA2A-201ENST00000297071 IGLV1-40P01703 118 aa14.29□□□□□ -0.12
TRA2A-201ENST00000297071 XGP55808 180 aa14.29□□□□□ -0.12
TRA2A-201ENST00000297071 FHL3Q13643 280 aa14.29□□□□□ -0.12
TRA2A-201ENST00000297071 TMEM263Q8WUH6 116 aaKnown RBP14.29□□□□□ -0.12
TRA2A-201ENST00000297071 PLA2G2AP14555 144 aa14.28□□□□□ -0.12
TRA2A-201ENST00000297071 ZNF256Q9Y2P7 627 aaPredicted RBP14.28□□□□□ -0.12
TRA2A-201ENST00000297071 TACC2O95359 2948 aa14.28□□□□□ -0.12
TRA2A-201ENST00000297071 IGHV3-16A0A0C4DH30 117 aa14.27□□□□□ -0.12
TRA2A-201ENST00000297071 A6NDX4 124 aa14.27□□□□□ -0.12
TRA2A-201ENST00000297071 M0QY20 66 aa14.27□□□□□ -0.12
TRA2A-201ENST00000297071 MT-ATP8P03928 68 aa14.27□□□□□ -0.12
TRA2A-201ENST00000297071 DEFB1P60022 68 aa14.27□□□□□ -0.13
TRA2A-201ENST00000297071 ANKRD29Q8N6D5 301 aa14.27□□□□□ -0.13
TRA2A-201ENST00000297071 DCANP1Q8TF63 244 aa14.27□□□□□ -0.13
TRA2A-201ENST00000297071 SCGB1C2P0DMR2 95 aa14.26□□□□□ -0.13
TRA2A-201ENST00000297071 RPL11P62913 178 aaKnown RBP14.26□□□□□ -0.13
TRA2A-201ENST00000297071 C20orf203Q8NBC4 194 aa14.26□□□□□ -0.13
TRA2A-201ENST00000297071 PTH2Q96A98 100 aa14.26□□□□□ -0.13
TRA2A-201ENST00000297071 ERG28Q9UKR5 140 aa14.26□□□□□ -0.13
TRA2A-201ENST00000297071 F5H697 171 aa14.25□□□□□ -0.13
TRA2A-201ENST00000297071 M0R2P5 195 aa14.25□□□□□ -0.13
TRA2A-201ENST00000297071 SLC25A20O43772 301 aa14.25□□□□□ -0.13
TRA2A-201ENST00000297071 LINC00527Q9UJ94 153 aa14.25□□□□□ -0.13
TRA2A-201ENST00000297071 PYGO1Q9Y3Y4 419 aa14.25□□□□□ -0.13
TRA2A-201ENST00000297071 A4D1N5 150 aa14.25□□□□□ -0.13
TRA2A-201ENST00000297071 RHODO00212 210 aa14.25□□□□□ -0.13
TRA2A-201ENST00000297071 ZNF22P17026 224 aaPredicted RBP14.25□□□□□ -0.13
TRA2A-201ENST00000297071 JPT2Q9H910 190 aa14.25□□□□□ -0.13
TRA2A-201ENST00000297071 UBTD1Q9HAC8 227 aa14.25□□□□□ -0.13
TRA2A-201ENST00000297071 EMP1P54849 157 aa14.24□□□□□ -0.13
TRA2A-201ENST00000297071 CFHR3Q02985 330 aa14.24□□□□□ -0.13
TRA2A-201ENST00000297071 DCHS2Q6V1P9 2916 aa14.23□□□□□ -0.13
TRA2A-201ENST00000297071 A0A087WWL8 130 aa14.22□□□□□ -0.13
TRA2A-201ENST00000297071 TRBV30A0A0K0K1B3 111 aa14.22□□□□□ -0.13
TRA2A-201ENST00000297071 I3L3M4 83 aa14.22□□□□□ -0.13
TRA2A-201ENST00000297071 PF4V1P10720 104 aa14.22□□□□□ -0.13
TRA2A-201ENST00000297071 ATXN8Q156A1 80 aa14.22□□□□□ -0.13
TRA2A-201ENST00000297071 RNF183Q96D59 192 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms