RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PRSS29PA6NIE9 313 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 I3L2K1 104 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 SIVA1O15304 175 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 SLURP1P55000 103 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 RPL39LQ96EH5 51 aaKnown RBP10.43□□□□□ -0.74
HPS3-201ENST00000296051 TRBV20-1A0A075B6N2 111 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 VWC2LB2RUY7 222 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 PTH2Q96A98 100 aa10.43□□□□□ -0.74
HPS3-201ENST00000296051 FGF6P10767 208 aa10.42□□□□□ -0.74
HPS3-201ENST00000296051 RNASE13Q5GAN3 156 aaKnown RBP10.42□□□□□ -0.74
HPS3-201ENST00000296051 SDHAF1A6NFY7 115 aa10.42□□□□□ -0.74
HPS3-201ENST00000296051 GNRH2O43555 120 aa10.42□□□□□ -0.74
HPS3-201ENST00000296051 IGLV2-23P01705 113 aa10.42□□□□□ -0.74
HPS3-201ENST00000296051 SPTBN5Q9NRC6 3674 aaKnown RBP10.42□□□□□ -0.74
HPS3-201ENST00000296051 ATG2AQ2TAZ0 1938 aa10.42□□□□□ -0.74
HPS3-201ENST00000296051 C22orf34Q6ZV56 151 aa10.42□□□□□ -0.74
HPS3-201ENST00000296051 Q8N976 141 aa10.42□□□□□ -0.74
HPS3-201ENST00000296051 PIFOQ8TCI5 191 aa10.42□□□□□ -0.74
HPS3-201ENST00000296051 FOXI2Q6ZQN5 318 aa10.41□□□□□ -0.74
HPS3-201ENST00000296051 PPDPFLQ8WWR9 84 aa10.41□□□□□ -0.74
HPS3-201ENST00000296051 G3V4G9 280 aa10.41□□□□□ -0.74
HPS3-201ENST00000296051 CGB3P0DN86 165 aa10.41□□□□□ -0.74
HPS3-201ENST00000296051 CGB7P0DN87 165 aa10.41□□□□□ -0.74
HPS3-201ENST00000296051 LINC00158P58513 81 aa10.41□□□□□ -0.74
HPS3-201ENST00000296051 MLST8Q9BVC4 326 aa10.41□□□□□ -0.74
HPS3-201ENST00000296051 OR11H6Q8NGC7 330 aa10.4□□□□□ -0.74
HPS3-201ENST00000296051 CHD9Q3L8U1 2897 aa10.4□□□□□ -0.74
HPS3-201ENST00000296051 B5MCH6 92 aa10.4□□□□□ -0.74
HPS3-201ENST00000296051 MUC22E2RYF6 1773 aaPredicted RBP10.39□□□□□ -0.75
HPS3-201ENST00000296051 C6orf226Q5I0X4 101 aa10.39□□□□□ -0.75
HPS3-201ENST00000296051 IGHV7-4-1A0A0J9YVY3 117 aa10.39□□□□□ -0.75
HPS3-201ENST00000296051 LGALS1P09382 135 aaKnown RBP10.39□□□□□ -0.75
HPS3-201ENST00000296051 NTN5Q8WTR8 489 aaPredicted RBP10.39□□□□□ -0.75
HPS3-201ENST00000296051 FRYLO94915 3013 aa10.39□□□□□ -0.75
HPS3-201ENST00000296051 C9orf66Q5T8R8 295 aa10.39□□□□□ -0.75
HPS3-201ENST00000296051 ZNF80P51504 273 aaPredicted RBP10.39□□□□□ -0.75
HPS3-201ENST00000296051 ODF1Q14990 250 aa10.39□□□□□ -0.75
HPS3-201ENST00000296051 PMVKQ15126 192 aa10.39□□□□□ -0.75
HPS3-201ENST00000296051 PRO1854Q9UHT4 67 aa10.39□□□□□ -0.75
HPS3-201ENST00000296051 IGKV2D-26A0A0A0MRZ7 120 aa10.38□□□□□ -0.75
HPS3-201ENST00000296051 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.38□□□□□ -0.75
HPS3-201ENST00000296051 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
HPS3-201ENST00000296051 APRG1Q8IVJ8 170 aa10.38□□□□□ -0.75
HPS3-201ENST00000296051 TIMM21Q9BVV7 248 aa10.38□□□□□ -0.75
HPS3-201ENST00000296051 CLPSL1A2RUU4 121 aa10.38□□□□□ -0.75
HPS3-201ENST00000296051 RBMY1BA6NDE4 496 aaKnown RBP10.38□□□□□ -0.75
HPS3-201ENST00000296051 RBMY1EA6NEQ0 496 aaKnown RBP10.38□□□□□ -0.75
HPS3-201ENST00000296051 RBMY1DP0C7P1 496 aaKnown RBP10.38□□□□□ -0.75
HPS3-201ENST00000296051 RBMY1A1P0DJD3 496 aaKnown RBP10.38□□□□□ -0.75
HPS3-201ENST00000296051 RBMY1CP0DJD4 496 aa10.38□□□□□ -0.75
HPS3-201ENST00000296051 ATXN8Q156A1 80 aa10.38□□□□□ -0.75
HPS3-201ENST00000296051 A0A0J9YY99 117 aa10.38□□□□□ -0.75
HPS3-201ENST00000296051 SLC25A20O43772 301 aa10.38□□□□□ -0.75
HPS3-201ENST00000296051 C20orf78Q9BR46 151 aa10.38□□□□□ -0.75
HPS3-201ENST00000296051 SS18L2Q9UHA2 77 aa10.37□□□□□ -0.75
HPS3-201ENST00000296051 IGHV7-81A0A0B4J1V7 117 aa10.37□□□□□ -0.75
HPS3-201ENST00000296051 CTSGP08311 255 aa10.37□□□□□ -0.75
HPS3-201ENST00000296051 PLEKHB2Q96CS7 222 aa10.37□□□□□ -0.75
HPS3-201ENST00000296051 HECTD1Q9ULT8 2610 aa10.37□□□□□ -0.75
HPS3-201ENST00000296051 F8P00451 2351 aa10.36□□□□□ -0.75
HPS3-201ENST00000296051 IGHV1OR15-1A0A075B7D0 117 aa10.36□□□□□ -0.75
HPS3-201ENST00000296051 J3QQQ9 107 aa10.36□□□□□ -0.75
HPS3-201ENST00000296051 PAX4O43316 350 aa10.36□□□□□ -0.75
HPS3-201ENST00000296051 CITED2Q99967 270 aaPredicted RBP10.36□□□□□ -0.75
HPS3-201ENST00000296051 AJUBAQ96IF1 538 aa10.36□□□□□ -0.75
HPS3-201ENST00000296051 IGHV3-38A0A0C4DH36 116 aa10.36□□□□□ -0.75
HPS3-201ENST00000296051 TMEM86BQ8N661 226 aa10.36□□□□□ -0.75
HPS3-201ENST00000296051 JPT2Q9H910 190 aa10.36□□□□□ -0.75
HPS3-201ENST00000296051 TRAV26-1A0A087WT03 109 aa10.36□□□□□ -0.75
HPS3-201ENST00000296051 SRSF2Q01130 221 aaKnown RBP10.35□□□□□ -0.75
HPS3-201ENST00000296051 SPAG8Q99932 426 aaPredicted RBP10.35□□□□□ -0.75
HPS3-201ENST00000296051 PTPRSQ13332 1948 aa10.35□□□□□ -0.75
HPS3-201ENST00000296051 ZNRF2Q8NHG8 242 aa10.35□□□□□ -0.75
HPS3-201ENST00000296051 MAST4O15021 2626 aa10.35□□□□□ -0.75
HPS3-201ENST00000296051 RS1O15537 224 aa10.34□□□□□ -0.75
HPS3-201ENST00000296051 CRYGCP07315 174 aa10.34□□□□□ -0.75
HPS3-201ENST00000296051 CRIP1P50238 77 aa10.34□□□□□ -0.75
HPS3-201ENST00000296051 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
HPS3-201ENST00000296051 S100A7L2Q5SY68 101 aa10.34□□□□□ -0.75
HPS3-201ENST00000296051 GATD1Q8NB37 220 aa10.34□□□□□ -0.75
HPS3-201ENST00000296051 TAL2Q16559 108 aa10.34□□□□□ -0.75
HPS3-201ENST00000296051 URB1-AS1Q96HZ7 61 aa10.34□□□□□ -0.75
HPS3-201ENST00000296051 C2orf91Q6ZV80 131 aa10.34□□□□□ -0.75
HPS3-201ENST00000296051 ESM1Q9NQ30 184 aa10.34□□□□□ -0.75
HPS3-201ENST00000296051 RHODO00212 210 aa10.33□□□□□ -0.76
HPS3-201ENST00000296051 LMO4P61968 165 aa10.33□□□□□ -0.76
HPS3-201ENST00000296051 WDFY4Q6ZS81 3184 aa10.33□□□□□ -0.76
HPS3-201ENST00000296051 IGLV1-47P01700 117 aa10.33□□□□□ -0.76
HPS3-201ENST00000296051 DNAJC9-AS1A6NH13 148 aa10.33□□□□□ -0.76
HPS3-201ENST00000296051 H3BUA1 57 aa10.33□□□□□ -0.76
HPS3-201ENST00000296051 TMEM190Q8WZ59 177 aa10.33□□□□□ -0.76
HPS3-201ENST00000296051 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
HPS3-201ENST00000296051 SS18Q15532 418 aa10.33□□□□□ -0.76
HPS3-201ENST00000296051 Q8N9W7 124 aa10.33□□□□□ -0.76
HPS3-201ENST00000296051 H3BMM0 161 aa10.32□□□□□ -0.76
HPS3-201ENST00000296051 LY6G5BQ8NDX9 201 aa10.32□□□□□ -0.76
HPS3-201ENST00000296051 UBE2WQ96B02 151 aa10.32□□□□□ -0.76
HPS3-201ENST00000296051 ATRQ13535 2644 aa10.32□□□□□ -0.76
HPS3-201ENST00000296051 IGLV11-55A0A075B6I3 123 aa10.32□□□□□ -0.76
HPS3-201ENST00000296051 PRIMA1Q86XR5 153 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms