RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 IGKV2-29A2NJV5 120 aaPredicted RBP7.77□□□□□ -1.17
COL6A3-201ENST00000295550 TAX1BP3O14907 124 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 DUX4L9Q6RFH8 374 aaPredicted RBP7.77□□□□□ -1.17
COL6A3-201ENST00000295550 TRAV26-1A0A087WT03 109 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 JMJD1CQ15652 2540 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 G3V4G9 280 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 HERV-K104P63124 156 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 NREPQ16612 68 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.17
COL6A3-201ENST00000295550 ZNF747Q9BV97 191 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 NDUFB1O75438 58 aa7.76□□□□□ -1.17
COL6A3-201ENST00000295550 PLA2G2CQ5R387 149 aa7.76□□□□□ -1.17
COL6A3-201ENST00000295550 MRPL53Q96EL3 112 aaKnown RBP7.76□□□□□ -1.17
COL6A3-201ENST00000295550 SEC61GP60059 68 aa7.76□□□□□ -1.17
COL6A3-201ENST00000295550 NDUFV3P56181 108 aaKnown RBP7.76□□□□□ -1.17
COL6A3-201ENST00000295550 WFDC2Q14508 124 aa7.76□□□□□ -1.17
COL6A3-201ENST00000295550 TMEM61Q8N0U2 210 aa7.76□□□□□ -1.17
COL6A3-201ENST00000295550 ATP6V0E2Q8NHE4 81 aa7.76□□□□□ -1.17
COL6A3-201ENST00000295550 NDUFA4O00483 81 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 LOXP28300 417 aaPredicted RBP7.75□□□□□ -1.17
COL6A3-201ENST00000295550 IGLV2-14P01704 120 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 FAM120AOSQ5T036 256 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 H0YGX0 51 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 LGALS9O00182 355 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 RUSC1-AS1Q66K80 236 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 ANKRD17O75179 2603 aaKnown RBP7.75□□□□□ -1.17
COL6A3-201ENST00000295550 ATP5G1P05496 136 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 FOXI1Q12951 378 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 SND1-IT1Q9HBX3 110 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 PKIGQ9Y2B9 76 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 DKK4Q9UBT3 224 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 UNQ6494/PRO21346Q6UXR6 183 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 A0A096LPF7 62 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 E7EQL1 145 aa7.75□□□□□ -1.17
COL6A3-201ENST00000295550 FAM215AQ9Y5M1 114 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 G3V318 75 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 COL8A2P25067 703 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 Q6ZQT7 251 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 DAND5Q8N907 189 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 RPL39LQ96EH5 51 aaKnown RBP7.74□□□□□ -1.17
COL6A3-201ENST00000295550 NAV2Q8IVL1 2488 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 LY6HO94772 140 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 IGHV7-4-1A0A0J9YVY3 117 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 A4D1N5 150 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 KAAG1Q9UBP8 84 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 TIRAPP58753 221 aa7.74□□□□□ -1.17
COL6A3-201ENST00000295550 NOP10Q9NPE3 64 aaKnown RBP7.74□□□□□ -1.17
COL6A3-201ENST00000295550 FXYD2P54710 66 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 USP9XQ93008 2570 aaPredicted RBP7.73□□□□□ -1.17
COL6A3-201ENST00000295550 LY6DQ14210 128 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 IGF2RP11717 2491 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 NCOR2Q9Y618 2525 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 CLEC2BQ92478 149 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 TDRG1Q3Y452 100 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 IGKV2D-24A0A075B6R9 120 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 FOXE3Q13461 319 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 Q6ZUT4 128 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 MPLKIPQ8TAP9 179 aa7.73□□□□□ -1.17
COL6A3-201ENST00000295550 RBAKDNA6NC62 111 aa7.72□□□□□ -1.17
COL6A3-201ENST00000295550 UPK3BQ9BT76 320 aa7.72□□□□□ -1.17
COL6A3-201ENST00000295550 TPSG1Q9NRR2 321 aa7.72□□□□□ -1.17
COL6A3-201ENST00000295550 HIGD1BQ9P298 99 aa7.72□□□□□ -1.17
COL6A3-201ENST00000295550 V9GYY9 64 aa7.72□□□□□ -1.17
COL6A3-201ENST00000295550 MRPL36Q9P0J6 103 aaKnown RBP7.72□□□□□ -1.17
COL6A3-201ENST00000295550 UBE2E1P51965 193 aa7.72□□□□□ -1.17
COL6A3-201ENST00000295550 MTORP42345 2549 aa7.72□□□□□ -1.17
COL6A3-201ENST00000295550 IGKV1OR2-108A0A075B7D4 117 aa7.72□□□□□ -1.17
COL6A3-201ENST00000295550 BPESC1Q9GZL8 116 aa7.72□□□□□ -1.17
COL6A3-201ENST00000295550 HIST2H2BCQ6DN03 193 aa7.72□□□□□ -1.17
COL6A3-201ENST00000295550 P0C879 139 aa7.71□□□□□ -1.17
COL6A3-201ENST00000295550 RNF183Q96D59 192 aa7.71□□□□□ -1.17
COL6A3-201ENST00000295550 TRBV12-3P01733 135 aa7.71□□□□□ -1.17
COL6A3-201ENST00000295550 GNRH2O43555 120 aa7.71□□□□□ -1.18
COL6A3-201ENST00000295550 BUB3O43684 328 aa7.71□□□□□ -1.18
COL6A3-201ENST00000295550 C9orf47Q6ZRZ4 202 aa7.71□□□□□ -1.18
COL6A3-201ENST00000295550 FLG2Q5D862 2391 aaPredicted RBP7.71□□□□□ -1.18
COL6A3-201ENST00000295550 CRIP3Q6Q6R5 217 aa7.71□□□□□ -1.18
COL6A3-201ENST00000295550 LINC00173Q6ZV60 143 aa7.7□□□□□ -1.18
COL6A3-201ENST00000295550 ZNF503Q96F45 646 aa7.7□□□□□ -1.18
COL6A3-201ENST00000295550 GATA3P23771 443 aa7.7□□□□□ -1.18
COL6A3-201ENST00000295550 GP9P14770 177 aa7.7□□□□□ -1.18
COL6A3-201ENST00000295550 TRAV23DV6A0A075B6W5 121 aa7.7□□□□□ -1.18
COL6A3-201ENST00000295550 K7EM74 188 aa7.7□□□□□ -1.18
COL6A3-201ENST00000295550 ANKRD39Q53RE8 183 aa7.7□□□□□ -1.18
COL6A3-201ENST00000295550 COX7A2LO14548 114 aa7.7□□□□□ -1.18
COL6A3-201ENST00000295550 POLQO75417 2590 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 NCR3O14931 201 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 IGKV4-1P06312 121 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 TIMM17AQ99595 171 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 IGLV10-54A0A075B6I4 117 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 PIP4P1Q86T03 277 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 Q9HAA7 133 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 IGHV1-69DA0A0B4J2H0 117 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 IGHV1-69P01742 117 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 FAM110AQ9BQ89 295 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 GATA1P15976 413 aaPredicted RBP7.69□□□□□ -1.18
COL6A3-201ENST00000295550 CAMK2N2Q96S95 79 aa7.69□□□□□ -1.18
COL6A3-201ENST00000295550 PIEZO1Q92508 2521 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms