RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 IGHV4-28A0A0C4DH34 117 aa10.9□□□□□ -0.66
CCDC140-201ENST00000295226 TDRG1Q3Y452 100 aa10.9□□□□□ -0.66
CCDC140-201ENST00000295226 TEX43Q6ZNM6 134 aa10.9□□□□□ -0.66
CCDC140-201ENST00000295226 FER1L6-AS1Q8NA97 138 aa10.9□□□□□ -0.66
CCDC140-201ENST00000295226 TP53TG1Q9Y2A0 90 aa10.9□□□□□ -0.66
CCDC140-201ENST00000295226 FBN3Q75N90 2809 aa10.9□□□□□ -0.66
CCDC140-201ENST00000295226 IGHV3-16A0A0C4DH30 117 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 IGLC6P0CF74 106 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 LYZL1Q6UWQ5 148 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 NIT1Q86X76 327 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 LINC00467Q9BRT7 94 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 CNFNQ9BYD5 112 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 MUC21A0A0G2JKD1 596 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 MUC21A0A140T8X8 626 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 OR5AL1P0C617 328 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 SSTP61278 116 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 RNASEKQ6P5S7 137 aaKnown RBP10.89□□□□□ -0.67
CCDC140-201ENST00000295226 Q8NAQ8 132 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 C11orf72Q8NBR9 251 aa10.89□□□□□ -0.67
CCDC140-201ENST00000295226 RNASE8Q8TDE3 154 aaKnown RBP10.89□□□□□ -0.67
CCDC140-201ENST00000295226 PLAC8L1A1L4L8 177 aa10.88□□□□□ -0.67
CCDC140-201ENST00000295226 H3BVH4 76 aa10.88□□□□□ -0.67
CCDC140-201ENST00000295226 RNASE3P12724 160 aaKnown RBP10.88□□□□□ -0.67
CCDC140-201ENST00000295226 KRTDAPP60985 99 aa10.88□□□□□ -0.67
CCDC140-201ENST00000295226 TPPP3Q9BW30 176 aa10.88□□□□□ -0.67
CCDC140-201ENST00000295226 PRO1933Q9H354 126 aa10.88□□□□□ -0.67
CCDC140-201ENST00000295226 ZMAT4Q9H898 229 aa10.88□□□□□ -0.67
CCDC140-201ENST00000295226 TRGV11A0A075B6L2 103 aa10.87□□□□□ -0.67
CCDC140-201ENST00000295226 SMIM9A6NGZ8 99 aa10.87□□□□□ -0.67
CCDC140-201ENST00000295226 LINC00614P0C842 121 aa10.87□□□□□ -0.67
CCDC140-201ENST00000295226 NTF3P20783 257 aa10.87□□□□□ -0.67
CCDC140-201ENST00000295226 S100A4P26447 101 aaKnown RBP10.87□□□□□ -0.67
CCDC140-201ENST00000295226 TMEM263Q8WUH6 116 aaKnown RBP10.87□□□□□ -0.67
CCDC140-201ENST00000295226 MUC4Q99102 2169 aa10.87□□□□□ -0.67
CCDC140-201ENST00000295226 MIFP14174 115 aa10.86□□□□□ -0.67
CCDC140-201ENST00000295226 ASIPP42127 132 aa10.86□□□□□ -0.67
CCDC140-201ENST00000295226 PMCHL1Q16048 86 aa10.86□□□□□ -0.67
CCDC140-201ENST00000295226 FAM104BQ5XKR9 115 aa10.86□□□□□ -0.67
CCDC140-201ENST00000295226 VAMP8Q9BV40 100 aa10.86□□□□□ -0.67
CCDC140-201ENST00000295226 NOP10Q9NPE3 64 aaKnown RBP10.86□□□□□ -0.67
CCDC140-201ENST00000295226 U3KQK5 164 aa10.86□□□□□ -0.67
CCDC140-201ENST00000295226 FAM19A2Q8N3H0 131 aa10.85□□□□□ -0.67
CCDC140-201ENST00000295226 C16orf74Q96GX8 76 aa10.85□□□□□ -0.67
CCDC140-201ENST00000295226 NDUFAF3Q9BU61 184 aa10.85□□□□□ -0.67
CCDC140-201ENST00000295226 TMEM191AQ9H0A3 160 aa10.85□□□□□ -0.67
CCDC140-201ENST00000295226 A0A0J9YWU9 116 aa10.85□□□□□ -0.67
CCDC140-201ENST00000295226 PPBPP02775 128 aa10.85□□□□□ -0.67
CCDC140-201ENST00000295226 C3orf79P0CE67 100 aa10.85□□□□□ -0.67
CCDC140-201ENST00000295226 BTF3P20290 206 aaKnown RBP10.85□□□□□ -0.67
CCDC140-201ENST00000295226 ZNF415Q09FC8 603 aa10.85□□□□□ -0.67
CCDC140-201ENST00000295226 LBHQ53QV2 105 aaPredicted RBP10.85□□□□□ -0.67
CCDC140-201ENST00000295226 ORMDL3Q8N138 153 aa10.85□□□□□ -0.67
CCDC140-201ENST00000295226 C9orf85Q96MD7 179 aa10.84□□□□□ -0.67
CCDC140-201ENST00000295226 LAMTOR2Q9Y2Q5 125 aa10.84□□□□□ -0.67
CCDC140-201ENST00000295226 TWIST1Q15672 202 aa10.83□□□□□ -0.68
CCDC140-201ENST00000295226 Q8N976 141 aa10.83□□□□□ -0.68
CCDC140-201ENST00000295226 URB1-AS1Q96HZ7 61 aa10.83□□□□□ -0.68
CCDC140-201ENST00000295226 MRPL16Q9NX20 251 aaKnown RBP10.83□□□□□ -0.68
CCDC140-201ENST00000295226 CELA1Q9UNI1 258 aa10.83□□□□□ -0.68
CCDC140-201ENST00000295226 NHLRC4P0CG21 123 aaPredicted RBP10.82□□□□□ -0.68
CCDC140-201ENST00000295226 CACNG7P62955 275 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 FAM222AQ5U5X8 452 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 MRPL52Q86TS9 123 aaKnown RBP10.82□□□□□ -0.68
CCDC140-201ENST00000295226 OR10AG1Q8NH19 301 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 IL17DQ8TAD2 202 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 AP5S1Q9NUS5 200 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 HSPB8Q9UJY1 196 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 C20orf202A1L168 122 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 LEPROTL1O95214 131 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 Q6ZTI0 123 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 FA2HQ7L5A8 372 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 SMIM15Q7Z3B0 74 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 C14orf144Q96I85 54 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 TMEM70Q9BUB7 260 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 SCRT2Q9NQ03 307 aa10.82□□□□□ -0.68
CCDC140-201ENST00000295226 TGP01266 2768 aa10.81□□□□□ -0.68
CCDC140-201ENST00000295226 TRGV1A0A0A0MS02 117 aa10.81□□□□□ -0.68
CCDC140-201ENST00000295226 IGHV1-24A0A0C4DH33 117 aa10.81□□□□□ -0.68
CCDC140-201ENST00000295226 M0R381 172 aa10.81□□□□□ -0.68
CCDC140-201ENST00000295226 PRSS3P2Q8NHM4 247 aa10.81□□□□□ -0.68
CCDC140-201ENST00000295226 PRELID3AQ96N28 172 aa10.81□□□□□ -0.68
CCDC140-201ENST00000295226 PHLDA3Q9Y5J5 127 aa10.81□□□□□ -0.68
CCDC140-201ENST00000295226 IGHV4-4A0A075B6R2 117 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 GAGE12BA1L429 117 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 SNAI2O43623 268 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 GAGE7O76087 117 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 DEFB130BP0DP73 79 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 DEFB130AP0DP74 79 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 DAZ2Q13117 558 aaKnown RBP10.8□□□□□ -0.68
CCDC140-201ENST00000295226 MRPL51Q4U2R6 128 aaKnown RBP10.8□□□□□ -0.68
CCDC140-201ENST00000295226 MSRB1Q9NZV6 116 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 DKK2Q9UBU2 259 aa10.8□□□□□ -0.68
CCDC140-201ENST00000295226 STAB2Q8WWQ8 2551 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 D6R8Y8 96 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 M0R2P5 195 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 MED14OSP0DP75 135 aa10.79□□□□□ -0.68
CCDC140-201ENST00000295226 CKS2P33552 79 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms