RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 RPL39LQ96EH5 51 aaKnown RBP13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 DEFB113Q30KQ7 82 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 C16orf54Q6UWD8 224 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 Q8N1Y9 231 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 MSRB1Q9NZV6 116 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 BUB3O43684 328 aa13.54□□□□□ -0.24
PCDHA13-201ENST00000289272 FBXL19-AS1Q494R0 122 aa13.54□□□□□ -0.24
PCDHA13-201ENST00000289272 IGHV3-53P01767 116 aa13.54□□□□□ -0.24
PCDHA13-201ENST00000289272 MDFICQ9P1T7 246 aa13.54□□□□□ -0.24
PCDHA13-201ENST00000289272 Q6ZPA2 131 aa13.54□□□□□ -0.24
PCDHA13-201ENST00000289272 CHD3Q12873 2000 aaKnown RBP13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 IGLC6P0CF74 106 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 Q6Q795 121 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 SEM1Q6ZVN7 128 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 IGHV1-58A0A0C4DH39 117 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 CDK2AP2O75956 126 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 C3orf22Q8N5N4 141 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 UBE2E2Q96LR5 201 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 PRO3102Q9H379 93 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 CREBBPQ92793 2442 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 TINCRA0A1B0GVN0 87 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 TTTY13Q9BZ97 58 aa13.53□□□□□ -0.24
PCDHA13-201ENST00000289272 GNRH2O43555 120 aa13.52□□□□□ -0.24
PCDHA13-201ENST00000289272 PSCAO43653 123 aa13.52□□□□□ -0.24
PCDHA13-201ENST00000289272 VSIG2Q96IQ7 327 aa13.52□□□□□ -0.24
PCDHA13-201ENST00000289272 TEX22C9J3V5 150 aa13.52□□□□□ -0.24
PCDHA13-201ENST00000289272 A0A0J9YXV3 536 aa13.52□□□□□ -0.25
PCDHA13-201ENST00000289272 TP73-AS1Q9UF72 201 aa13.52□□□□□ -0.25
PCDHA13-201ENST00000289272 CTSGP08311 255 aa13.52□□□□□ -0.25
PCDHA13-201ENST00000289272 PCNX3Q9H6A9 2034 aa13.52□□□□□ -0.25
PCDHA13-201ENST00000289272 TTC28Q96AY4 2481 aa13.51□□□□□ -0.25
PCDHA13-201ENST00000289272 MIAQ16674 131 aa13.51□□□□□ -0.25
PCDHA13-201ENST00000289272 IGKV1D-37A0A075B6S9 117 aa13.51□□□□□ -0.25
PCDHA13-201ENST00000289272 SRCAPQ6ZRS2 3230 aa13.51□□□□□ -0.25
PCDHA13-201ENST00000289272 MED13LQ71F56 2210 aa13.5□□□□□ -0.25
PCDHA13-201ENST00000289272 C2orf91Q6ZV80 131 aa13.5□□□□□ -0.25
PCDHA13-201ENST00000289272 DAZ2Q13117 558 aaKnown RBP13.5□□□□□ -0.25
PCDHA13-201ENST00000289272 DAZ4Q86SG3 579 aaKnown RBP13.5□□□□□ -0.25
PCDHA13-201ENST00000289272 SND1-IT1Q9HBX3 110 aa13.5□□□□□ -0.25
PCDHA13-201ENST00000289272 DAZ3Q9NR90 486 aaKnown RBP13.5□□□□□ -0.25
PCDHA13-201ENST00000289272 A0A0J9YXY3 114 aa13.5□□□□□ -0.25
PCDHA13-201ENST00000289272 MAPK1IP1LQ8NDC0 245 aa13.5□□□□□ -0.25
PCDHA13-201ENST00000289272 TRBV30A0A0K0K1B3 111 aa13.49□□□□□ -0.25
PCDHA13-201ENST00000289272 NEXN-AS1Q8NBZ9 246 aa13.49□□□□□ -0.25
PCDHA13-201ENST00000289272 CRYGBP07316 175 aa13.49□□□□□ -0.25
PCDHA13-201ENST00000289272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDHA13-201ENST00000289272 TECTAO75443 2155 aa13.48□□□□□ -0.25
PCDHA13-201ENST00000289272 MSMPQ1L6U9 139 aa13.48□□□□□ -0.25
PCDHA13-201ENST00000289272 RITA1Q96K30 269 aa13.48□□□□□ -0.25
PCDHA13-201ENST00000289272 CENPVL3A0A0U1RRI6 287 aa13.48□□□□□ -0.25
PCDHA13-201ENST00000289272 GRNP28799 593 aaKnown RBP13.48□□□□□ -0.25
PCDHA13-201ENST00000289272 ADORA2A-AS1P86434 159 aa13.48□□□□□ -0.25
PCDHA13-201ENST00000289272 EML6Q6ZMW3 1958 aa13.47□□□□□ -0.25
PCDHA13-201ENST00000289272 ADAMTS9Q9P2N4 1935 aa13.47□□□□□ -0.25
PCDHA13-201ENST00000289272 COX7A2LO14548 114 aa13.47□□□□□ -0.25
PCDHA13-201ENST00000289272 MYCNOSP40205 109 aa13.47□□□□□ -0.25
PCDHA13-201ENST00000289272 C10orf105Q8TEF2 133 aa13.47□□□□□ -0.25
PCDHA13-201ENST00000289272 DAD1P61803 113 aa13.47□□□□□ -0.25
PCDHA13-201ENST00000289272 PTH2Q96A98 100 aa13.47□□□□□ -0.25
PCDHA13-201ENST00000289272 C10orf142B7Z368 130 aa13.47□□□□□ -0.25
PCDHA13-201ENST00000289272 UFSP1Q6NVU6 142 aa13.47□□□□□ -0.25
PCDHA13-201ENST00000289272 ZNF561-AS1K7EIQ3 104 aa13.46□□□□□ -0.25
PCDHA13-201ENST00000289272 DEFB112Q30KQ8 113 aa13.46□□□□□ -0.25
PCDHA13-201ENST00000289272 C20orf203Q8NBC4 194 aa13.46□□□□□ -0.25
PCDHA13-201ENST00000289272 OPRPNQ99935 248 aaPredicted RBP13.46□□□□□ -0.25
PCDHA13-201ENST00000289272 K7EMT4 169 aa13.46□□□□□ -0.25
PCDHA13-201ENST00000289272 LOXL1Q08397 574 aaPredicted RBP13.46□□□□□ -0.26
PCDHA13-201ENST00000289272 CFAP126Q5VTH2 177 aa13.46□□□□□ -0.26
PCDHA13-201ENST00000289272 XCL2Q9UBD3 114 aa13.46□□□□□ -0.26
PCDHA13-201ENST00000289272 TRAV12-2A0A075B6T6 113 aa13.45□□□□□ -0.26
PCDHA13-201ENST00000289272 TMEM256-PLSCR3K7ERE1 68 aa13.45□□□□□ -0.26
PCDHA13-201ENST00000289272 ATP5EP56381 51 aaPredicted RBP13.45□□□□□ -0.26
PCDHA13-201ENST00000289272 ZFHX2Q9C0A1 2572 aaPredicted RBP13.45□□□□□ -0.26
PCDHA13-201ENST00000289272 WISP2O76076 250 aa13.45□□□□□ -0.26
PCDHA13-201ENST00000289272 DEFB130BP0DP73 79 aa13.45□□□□□ -0.26
PCDHA13-201ENST00000289272 DEFB130AP0DP74 79 aa13.45□□□□□ -0.26
PCDHA13-201ENST00000289272 BRWD1-AS2P59051 145 aa13.45□□□□□ -0.26
PCDHA13-201ENST00000289272 LRRC75A-AS1Q8N1F1 130 aa13.45□□□□□ -0.26
PCDHA13-201ENST00000289272 IGHV3-38A0A0C4DH36 116 aa13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 COX7B2Q8TF08 81 aa13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 NCKAP5O14513 1909 aa13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 IGHV7-81A0A0B4J1V7 117 aa13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 HOXD3P31249 432 aaPredicted RBP13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 CXCL5P42830 114 aa13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 CGB3P0DN86 165 aa13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 CGB7P0DN87 165 aa13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 LINC00322Q6ZN03 302 aaPredicted RBP13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 IGHV3-16A0A0C4DH30 117 aa13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 NKAPP1Q8N9T2 125 aa13.44□□□□□ -0.26
PCDHA13-201ENST00000289272 IGHV4-61A0A0C4DH41 118 aa13.43□□□□□ -0.26
PCDHA13-201ENST00000289272 IGKV3D-7A0A0C4DH55 119 aa13.43□□□□□ -0.26
PCDHA13-201ENST00000289272 Q8N976 141 aa13.43□□□□□ -0.26
PCDHA13-201ENST00000289272 PLCE1Q9P212 2302 aa13.43□□□□□ -0.26
PCDHA13-201ENST00000289272 IGLV1-47P01700 117 aa13.43□□□□□ -0.26
PCDHA13-201ENST00000289272 TMEM89A2RUT3 159 aa13.43□□□□□ -0.26
PCDHA13-201ENST00000289272 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.42□□□□□ -0.26
PCDHA13-201ENST00000289272 IGKV2-29A2NJV5 120 aaPredicted RBP13.42□□□□□ -0.26
PCDHA13-201ENST00000289272 ODF3Q96PU9 254 aa13.42□□□□□ -0.26
PCDHA13-201ENST00000289272 PROP1O75360 226 aa13.42□□□□□ -0.26
PCDHA13-201ENST00000289272 IGHV3-30-3P0DP02 117 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms