RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 FAM231CP0DMU5 169 aa11.94□□□□□ -0.5
CTDSP1-201ENST00000273062 VMA21Q3ZAQ7 101 aa11.94□□□□□ -0.5
CTDSP1-201ENST00000273062 C2orf66Q6UXQ4 117 aa11.94□□□□□ -0.5
CTDSP1-201ENST00000273062 DLX6P56179 175 aa11.94□□□□□ -0.5
CTDSP1-201ENST00000273062 ADORA2A-AS1P86434 159 aa11.94□□□□□ -0.5
CTDSP1-201ENST00000273062 ITPR1Q14643 2758 aa11.93□□□□□ -0.5
CTDSP1-201ENST00000273062 TEX22C9J3V5 150 aa11.93□□□□□ -0.5
CTDSP1-201ENST00000273062 RPL39LQ96EH5 51 aaKnown RBP11.93□□□□□ -0.5
CTDSP1-201ENST00000273062 KIR2DL5BQ8NHK3 375 aa11.93□□□□□ -0.5
CTDSP1-201ENST00000273062 SMCR5Q8TEV8 140 aa11.93□□□□□ -0.5
CTDSP1-201ENST00000273062 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
CTDSP1-201ENST00000273062 PRAC2D3DTV9 90 aa11.92□□□□□ -0.5
CTDSP1-201ENST00000273062 OXTP01178 125 aa11.92□□□□□ -0.5
CTDSP1-201ENST00000273062 C4orf26Q17RF5 130 aa11.92□□□□□ -0.5
CTDSP1-201ENST00000273062 LINC00526Q96FQ7 95 aa11.92□□□□□ -0.5
CTDSP1-201ENST00000273062 UQCRQO14949 82 aa11.92□□□□□ -0.5
CTDSP1-201ENST00000273062 EEF1AKMT3Q96AZ1 226 aa11.92□□□□□ -0.5
CTDSP1-201ENST00000273062 A0A1B0GX51 115 aa11.91□□□□□ -0.5
CTDSP1-201ENST00000273062 F5H768 121 aa11.91□□□□□ -0.5
CTDSP1-201ENST00000273062 TMEM170BQ5T4T1 132 aa11.91□□□□□ -0.5
CTDSP1-201ENST00000273062 DYNAPQ8N1N2 210 aa11.91□□□□□ -0.5
CTDSP1-201ENST00000273062 TRAV41A0A0B4J266 112 aa11.91□□□□□ -0.5
CTDSP1-201ENST00000273062 TSHBP01222 138 aa11.91□□□□□ -0.5
CTDSP1-201ENST00000273062 KLRB1Q12918 225 aa11.91□□□□□ -0.5
CTDSP1-201ENST00000273062 IGHV7-4-1A0A0J9YVY3 117 aa11.9□□□□□ -0.5
CTDSP1-201ENST00000273062 IGHV1-8P0DP01 117 aa11.9□□□□□ -0.5
CTDSP1-201ENST00000273062 TMEM30BQ3MIR4 351 aa11.9□□□□□ -0.5
CTDSP1-201ENST00000273062 MUSTN1Q8IVN3 82 aa11.9□□□□□ -0.5
CTDSP1-201ENST00000273062 IGFBPL1Q8WX77 278 aa11.9□□□□□ -0.5
CTDSP1-201ENST00000273062 IGHV3OR16-8A0A075B7F1 116 aa11.9□□□□□ -0.5
CTDSP1-201ENST00000273062 K7EIM0 57 aa11.9□□□□□ -0.5
CTDSP1-201ENST00000273062 LINC01600Q96MT4 127 aa11.9□□□□□ -0.5
CTDSP1-201ENST00000273062 KAAG1Q9UBP8 84 aa11.9□□□□□ -0.5
CTDSP1-201ENST00000273062 SPTBN1Q01082 2364 aaKnown RBP11.9□□□□□ -0.5
CTDSP1-201ENST00000273062 ASH1LQ9NR48 2969 aaKnown RBP11.9□□□□□ -0.51
CTDSP1-201ENST00000273062 PDE6HQ13956 83 aa11.9□□□□□ -0.51
CTDSP1-201ENST00000273062 Q6ZSV7 163 aa11.9□□□□□ -0.51
CTDSP1-201ENST00000273062 CLEC2BQ92478 149 aa11.9□□□□□ -0.51
CTDSP1-201ENST00000273062 METTL26Q96S19 204 aa11.9□□□□□ -0.51
CTDSP1-201ENST00000273062 ORMDL2Q53FV1 153 aa11.89□□□□□ -0.51
CTDSP1-201ENST00000273062 OR13C6PQ8NH95 151 aa11.89□□□□□ -0.51
CTDSP1-201ENST00000273062 RNF223E7ERA6 249 aa11.89□□□□□ -0.51
CTDSP1-201ENST00000273062 UCNP55089 124 aa11.89□□□□□ -0.51
CTDSP1-201ENST00000273062 SUMO2P61956 95 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-201ENST00000273062 ARHGAP32A7KAX9 2087 aa11.88□□□□□ -0.51
CTDSP1-201ENST00000273062 FAM240AA0A1B0GVK7 77 aa11.88□□□□□ -0.51
CTDSP1-201ENST00000273062 hADV29S1A0JD25 119 aa11.88□□□□□ -0.51
CTDSP1-201ENST00000273062 HRCT1Q6UXD1 115 aa11.88□□□□□ -0.51
CTDSP1-201ENST00000273062 TMEM219Q86XT9 240 aa11.88□□□□□ -0.51
CTDSP1-201ENST00000273062 ZNRF2Q8NHG8 242 aa11.88□□□□□ -0.51
CTDSP1-201ENST00000273062 IGHV3-64A0A075B6Q5 118 aa11.87□□□□□ -0.51
CTDSP1-201ENST00000273062 A0A0B4J2C4 111 aa11.87□□□□□ -0.51
CTDSP1-201ENST00000273062 FBXL19-AS1Q494R0 122 aa11.87□□□□□ -0.51
CTDSP1-201ENST00000273062 GAGE2AQ6NT46 116 aa11.87□□□□□ -0.51
CTDSP1-201ENST00000273062 RNF182Q8N6D2 247 aa11.87□□□□□ -0.51
CTDSP1-201ENST00000273062 SMAD5-AS1Q9Y6J3 95 aa11.87□□□□□ -0.51
CTDSP1-201ENST00000273062 COX7A1P24310 79 aa11.87□□□□□ -0.51
CTDSP1-201ENST00000273062 SPANXN1Q5VSR9 72 aa11.87□□□□□ -0.51
CTDSP1-201ENST00000273062 J3QQQ9 107 aa11.86□□□□□ -0.51
CTDSP1-201ENST00000273062 SRSF2Q01130 221 aaKnown RBP11.86□□□□□ -0.51
CTDSP1-201ENST00000273062 C2orf48Q96LS8 159 aa11.86□□□□□ -0.51
CTDSP1-201ENST00000273062 HIVEP3Q5T1R4 2406 aa11.86□□□□□ -0.51
CTDSP1-201ENST00000273062 MFAP4P55083 255 aa11.86□□□□□ -0.51
CTDSP1-201ENST00000273062 LINC00311Q8N616 119 aa11.86□□□□□ -0.51
CTDSP1-201ENST00000273062 ZNF580Q9UK33 172 aa11.85□□□□□ -0.51
CTDSP1-201ENST00000273062 CRYGBP07316 175 aa11.85□□□□□ -0.51
CTDSP1-201ENST00000273062 UBE2E1P51965 193 aa11.85□□□□□ -0.51
CTDSP1-201ENST00000273062 OVOL1O14753 267 aa11.84□□□□□ -0.51
CTDSP1-201ENST00000273062 RPL39P62891 51 aaKnown RBP11.84□□□□□ -0.51
CTDSP1-201ENST00000273062 DSCR8Q96T75 97 aa11.84□□□□□ -0.51
CTDSP1-201ENST00000273062 TRBV30A0A0K0K1B3 111 aa11.84□□□□□ -0.51
CTDSP1-201ENST00000273062 TMEM223A0PJW6 202 aa11.84□□□□□ -0.51
CTDSP1-201ENST00000273062 IGHV3-23P01764 117 aa11.83□□□□□ -0.52
CTDSP1-201ENST00000273062 COX7CP15954 63 aa11.83□□□□□ -0.52
CTDSP1-201ENST00000273062 C8orf31Q8N9H6 132 aa11.83□□□□□ -0.52
CTDSP1-201ENST00000273062 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.52
CTDSP1-201ENST00000273062 A0A1W2PPR1 153 aa11.83□□□□□ -0.52
CTDSP1-201ENST00000273062 LGALS3P17931 250 aaKnown RBP11.83□□□□□ -0.52
CTDSP1-201ENST00000273062 DEFB121Q5J5C9 76 aa11.83□□□□□ -0.52
CTDSP1-201ENST00000273062 RPS28P62857 69 aaKnown RBP11.82□□□□□ -0.52
CTDSP1-201ENST00000273062 NSUN5P1Q3KNT7 163 aa11.82□□□□□ -0.52
CTDSP1-201ENST00000273062 TMEM190Q8WZ59 177 aa11.82□□□□□ -0.52
CTDSP1-201ENST00000273062 AKAP6Q13023 2319 aa11.82□□□□□ -0.52
CTDSP1-201ENST00000273062 COL12A1Q99715 3063 aa11.82□□□□□ -0.52
CTDSP1-201ENST00000273062 H3BT86 120 aa11.82□□□□□ -0.52
CTDSP1-201ENST00000273062 IGLV1-47P01700 117 aa11.82□□□□□ -0.52
CTDSP1-201ENST00000273062 Q5XG85 94 aa11.82□□□□□ -0.52
CTDSP1-201ENST00000273062 TP53TG1Q9Y2A0 90 aa11.82□□□□□ -0.52
CTDSP1-201ENST00000273062 ICOSQ9Y6W8 199 aa11.82□□□□□ -0.52
CTDSP1-201ENST00000273062 WNK2Q9Y3S1 2297 aa11.81□□□□□ -0.52
CTDSP1-201ENST00000273062 ADARB2-AS1A8MUL3 147 aa11.81□□□□□ -0.52
CTDSP1-201ENST00000273062 M0R381 172 aa11.81□□□□□ -0.52
CTDSP1-201ENST00000273062 DPH3Q96FX2 82 aa11.81□□□□□ -0.52
CTDSP1-201ENST00000273062 IMUPQ9GZP8 106 aa11.81□□□□□ -0.52
CTDSP1-201ENST00000273062 MED13LQ71F56 2210 aa11.81□□□□□ -0.52
CTDSP1-201ENST00000273062 BUB1B-PAK6H3BSN5 160 aa11.81□□□□□ -0.52
CTDSP1-201ENST00000273062 ZNF256Q9Y2P7 627 aaPredicted RBP11.81□□□□□ -0.52
CTDSP1-201ENST00000273062 VPS13CQ709C8 3753 aa11.8□□□□□ -0.52
CTDSP1-201ENST00000273062 TRAV8-3A0A0A6YYJ7 113 aa11.8□□□□□ -0.52
CTDSP1-201ENST00000273062 IGHV1-3A0A0C4DH29 117 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms