RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 C9orf47Q6ZRZ4 202 aa10.51□□□□□ -0.73
NPC1-201ENST00000269228 Q8N1Y9 231 aa10.51□□□□□ -0.73
NPC1-201ENST00000269228 MRPL35Q9NZE8 188 aaKnown RBP10.51□□□□□ -0.73
NPC1-201ENST00000269228 COL5A1P20908 1838 aaPredicted RBP10.51□□□□□ -0.73
NPC1-201ENST00000269228 USP9YO00507 2555 aaPredicted RBP10.51□□□□□ -0.73
NPC1-201ENST00000269228 SPANXA1Q9NS26 97 aa10.51□□□□□ -0.73
NPC1-201ENST00000269228 Q6ZQT7 251 aa10.5□□□□□ -0.73
NPC1-201ENST00000269228 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.5□□□□□ -0.73
NPC1-201ENST00000269228 IGKV2-29A2NJV5 120 aaPredicted RBP10.5□□□□□ -0.73
NPC1-201ENST00000269228 DEFB4AO15263 64 aa10.5□□□□□ -0.73
NPC1-201ENST00000269228 ATP5G1P05496 136 aa10.5□□□□□ -0.73
NPC1-201ENST00000269228 EIF4EBP1Q13541 118 aaPredicted RBP10.5□□□□□ -0.73
NPC1-201ENST00000269228 EBI3Q14213 229 aa10.49□□□□□ -0.73
NPC1-201ENST00000269228 Q6ZWC4 215 aa10.49□□□□□ -0.73
NPC1-201ENST00000269228 CRLF1O75462 422 aa10.49□□□□□ -0.73
NPC1-201ENST00000269228 LY6G6DO95868 133 aa10.49□□□□□ -0.73
NPC1-201ENST00000269228 RPL39LQ96EH5 51 aaKnown RBP10.49□□□□□ -0.73
NPC1-201ENST00000269228 C20orf144Q9BQM9 153 aa10.49□□□□□ -0.73
NPC1-201ENST00000269228 C2CD3Q4AC94 2353 aa10.49□□□□□ -0.73
NPC1-201ENST00000269228 GYPEP15421 78 aa10.49□□□□□ -0.73
NPC1-201ENST00000269228 Q6ZSV7 163 aa10.49□□□□□ -0.73
NPC1-201ENST00000269228 MRPL52Q86TS9 123 aaKnown RBP10.49□□□□□ -0.73
NPC1-201ENST00000269228 SUMO4Q6EEV6 95 aa10.48□□□□□ -0.73
NPC1-201ENST00000269228 SMAD5-AS1Q9Y6J3 95 aa10.48□□□□□ -0.73
NPC1-201ENST00000269228 FASNP49327 2511 aaKnown RBP10.48□□□□□ -0.73
NPC1-201ENST00000269228 NXPH4O95158 308 aa10.48□□□□□ -0.73
NPC1-201ENST00000269228 CRYGBP07316 175 aa10.48□□□□□ -0.73
NPC1-201ENST00000269228 C10orf99Q6UWK7 81 aa10.48□□□□□ -0.73
NPC1-201ENST00000269228 KLF12Q9Y4X4 402 aa10.48□□□□□ -0.73
NPC1-201ENST00000269228 A0A0J9YX75 114 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 INSL3P51460 131 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 F8VRH5 84 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 ATXN8Q156A1 80 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 Q6ZVH6 145 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 RMI2Q96E14 147 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 TANC2Q9HCD6 1990 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 KRTAP10-9P60411 292 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 ZNF295-AS1Q8N0V1 137 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 DEFB125Q8N687 156 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 Q9HAA7 133 aa10.47□□□□□ -0.73
NPC1-201ENST00000269228 MAP6D1Q9H9H5 199 aa10.46□□□□□ -0.73
NPC1-201ENST00000269228 NDUFA12Q9UI09 145 aa10.46□□□□□ -0.73
NPC1-201ENST00000269228 SETD2Q9BYW2 2564 aaPredicted RBP10.46□□□□□ -0.73
NPC1-201ENST00000269228 IGKV2D-24A0A075B6R9 120 aa10.46□□□□□ -0.73
NPC1-201ENST00000269228 XCL1P47992 114 aa10.46□□□□□ -0.73
NPC1-201ENST00000269228 LGALS9BQ3B8N2 356 aa10.46□□□□□ -0.73
NPC1-201ENST00000269228 LGALS9CQ6DKI2 356 aa10.46□□□□□ -0.73
NPC1-201ENST00000269228 NDUFA11Q86Y39 141 aa10.46□□□□□ -0.73
NPC1-201ENST00000269228 ZNF503Q96F45 646 aa10.46□□□□□ -0.73
NPC1-201ENST00000269228 H3BMM0 161 aa10.46□□□□□ -0.74
NPC1-201ENST00000269228 KIR3DS1Q14943 382 aa10.46□□□□□ -0.74
NPC1-201ENST00000269228 UBE2WQ96B02 151 aa10.46□□□□□ -0.74
NPC1-201ENST00000269228 MRPL23Q16540 153 aaKnown RBP10.45□□□□□ -0.74
NPC1-201ENST00000269228 HIST2H2BDQ6DRA6 164 aa10.45□□□□□ -0.74
NPC1-201ENST00000269228 ATP6V0E2Q8NHE4 81 aa10.45□□□□□ -0.74
NPC1-201ENST00000269228 ZNF462Q96JM2 2506 aa10.45□□□□□ -0.74
NPC1-201ENST00000269228 SPINK8P0C7L1 97 aa10.45□□□□□ -0.74
NPC1-201ENST00000269228 GTSF1Q8WW33 167 aa10.45□□□□□ -0.74
NPC1-201ENST00000269228 K7EQD1 137 aa10.45□□□□□ -0.74
NPC1-201ENST00000269228 HERVK_113P63121 156 aa10.45□□□□□ -0.74
NPC1-201ENST00000269228 TEX48A0A1B0GUV7 120 aa10.45□□□□□ -0.74
NPC1-201ENST00000269228 DKK2Q9UBU2 259 aa10.45□□□□□ -0.74
NPC1-201ENST00000269228 LRRK2Q5S007 2527 aa10.45□□□□□ -0.74
NPC1-201ENST00000269228 DNAH12Q6ZR08 3092 aa10.44□□□□□ -0.74
NPC1-201ENST00000269228 PRSS29PA6NIE9 313 aa10.44□□□□□ -0.74
NPC1-201ENST00000269228 GAGE2BQ13066 116 aa10.44□□□□□ -0.74
NPC1-201ENST00000269228 GAGE2EQ4V326 116 aa10.44□□□□□ -0.74
NPC1-201ENST00000269228 ZFAND6Q6FIF0 208 aa10.44□□□□□ -0.74
NPC1-201ENST00000269228 GAGE2DQ9UEU5 116 aa10.44□□□□□ -0.74
NPC1-201ENST00000269228 ICOSQ9Y6W8 199 aa10.44□□□□□ -0.74
NPC1-201ENST00000269228 IGLC3P0DOY3 106 aa10.43□□□□□ -0.74
NPC1-201ENST00000269228 MDFICQ9P1T7 246 aa10.43□□□□□ -0.74
NPC1-201ENST00000269228 LAMTOR3Q9UHA4 124 aa10.43□□□□□ -0.74
NPC1-201ENST00000269228 DNAJC30Q96LL9 226 aa10.42□□□□□ -0.74
NPC1-201ENST00000269228 IGLL1P15814 213 aa10.42□□□□□ -0.74
NPC1-201ENST00000269228 ZNF747Q9BV97 191 aa10.42□□□□□ -0.74
NPC1-201ENST00000269228 A0A1W2PPR1 153 aa10.42□□□□□ -0.74
NPC1-201ENST00000269228 NKAPP1Q8N9T2 125 aa10.41□□□□□ -0.74
NPC1-201ENST00000269228 J3QQQ9 107 aa10.41□□□□□ -0.74
NPC1-201ENST00000269228 K7EMI3 77 aa10.41□□□□□ -0.74
NPC1-201ENST00000269228 LGALS9O00182 355 aa10.41□□□□□ -0.74
NPC1-201ENST00000269228 CCL18P55774 89 aa10.41□□□□□ -0.74
NPC1-201ENST00000269228 DEFB114Q30KQ6 69 aa10.41□□□□□ -0.74
NPC1-201ENST00000269228 HHLA3Q9XRX5 114 aa10.41□□□□□ -0.74
NPC1-201ENST00000269228 C5orf38Q86SI9 138 aa10.41□□□□□ -0.74
NPC1-201ENST00000269228 IGHV3-30P01768 117 aa10.4□□□□□ -0.74
NPC1-201ENST00000269228 IGHV3-33P01772 117 aa10.4□□□□□ -0.74
NPC1-201ENST00000269228 IGHV3-30-3P0DP02 117 aa10.4□□□□□ -0.74
NPC1-201ENST00000269228 IGHV3-30-5P0DP03 117 aa10.4□□□□□ -0.74
NPC1-201ENST00000269228 IGLV10-54A0A075B6I4 117 aa10.4□□□□□ -0.74
NPC1-201ENST00000269228 TRAV8-3A0A0A6YYJ7 113 aa10.4□□□□□ -0.74
NPC1-201ENST00000269228 AVPP01185 164 aa10.4□□□□□ -0.74
NPC1-201ENST00000269228 C1orf43Q9BWL3 253 aa10.4□□□□□ -0.74
NPC1-201ENST00000269228 HCFC1P51610 2035 aa10.4□□□□□ -0.74
NPC1-201ENST00000269228 ZFP2Q6ZN57 461 aa10.4□□□□□ -0.75
NPC1-201ENST00000269228 K7EQG2 157 aa10.39□□□□□ -0.75
NPC1-201ENST00000269228 Q8N6K4 173 aa10.39□□□□□ -0.75
NPC1-201ENST00000269228 ZNF702PQ9H963 129 aa10.39□□□□□ -0.75
NPC1-201ENST00000269228 EML5Q05BV3 1969 aa10.39□□□□□ -0.75
NPC1-201ENST00000269228 DAZ2Q13117 558 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms