RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RHPN1-AS1Q9BWJ2 59 aa8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 TRGV11A0A075B6L2 103 aa8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 IGKV2D-26A0A0A0MRZ7 120 aa8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 RBAKDNA6NC62 111 aa8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 ODF3BA8MYP8 253 aa8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 E9PLD3 99 aa8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 SPRY2O43597 315 aa8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 DUSP14O95147 198 aaKnown RBP8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 ZFP36P26651 326 aaKnown RBP8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 CRYBA4P53673 196 aa8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 DEFB113Q30KQ7 82 aa8.91□□□□□ -0.98
CLSTN3-201ENST00000266546 WI2-2373I1.2A0A1W2PRP0 233 aa8.9□□□□□ -0.98
CLSTN3-201ENST00000266546 LRRC75A-AS1Q8N1F1 130 aa8.9□□□□□ -0.98
CLSTN3-201ENST00000266546 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
CLSTN3-201ENST00000266546 IGLV11-55A0A075B6I3 123 aa8.9□□□□□ -0.98
CLSTN3-201ENST00000266546 IGHV4-30-2A0A087WSY4 118 aa8.9□□□□□ -0.98
CLSTN3-201ENST00000266546 IGHV3-73A0A0B4J1V6 119 aa8.9□□□□□ -0.98
CLSTN3-201ENST00000266546 RNASE1P07998 156 aaKnown RBP8.9□□□□□ -0.98
CLSTN3-201ENST00000266546 TMEM101Q96IK0 257 aa8.9□□□□□ -0.98
CLSTN3-201ENST00000266546 TM2D2Q9BX73 214 aa8.9□□□□□ -0.98
CLSTN3-201ENST00000266546 CFC1BP0CG36 223 aa8.9□□□□□ -0.99
CLSTN3-201ENST00000266546 CFC1P0CG37 223 aa8.9□□□□□ -0.99
CLSTN3-201ENST00000266546 SPTBN5Q9NRC6 3674 aaKnown RBP8.89□□□□□ -0.99
CLSTN3-201ENST00000266546 CTSGP08311 255 aa8.89□□□□□ -0.99
CLSTN3-201ENST00000266546 RPL39LQ96EH5 51 aaKnown RBP8.89□□□□□ -0.99
CLSTN3-201ENST00000266546 CFAP54Q96N23 3096 aa8.89□□□□□ -0.99
CLSTN3-201ENST00000266546 HIST2H2BCQ6DN03 193 aa8.89□□□□□ -0.99
CLSTN3-201ENST00000266546 F8P00451 2351 aa8.89□□□□□ -0.99
CLSTN3-201ENST00000266546 TRAV12-1A0A0B4J245 112 aa8.89□□□□□ -0.99
CLSTN3-201ENST00000266546 PRAC2D3DTV9 90 aa8.89□□□□□ -0.99
CLSTN3-201ENST00000266546 MORN3Q6PF18 240 aaPredicted RBP8.89□□□□□ -0.99
CLSTN3-201ENST00000266546 TRPT1Q86TN4 253 aaKnown RBP8.89□□□□□ -0.99
CLSTN3-201ENST00000266546 WDFY4Q6ZS81 3184 aa8.88□□□□□ -0.99
CLSTN3-201ENST00000266546 PTH2Q96A98 100 aa8.88□□□□□ -0.99
CLSTN3-201ENST00000266546 FAM223BA6NKX1 122 aa8.88□□□□□ -0.99
CLSTN3-201ENST00000266546 CRIP1P50238 77 aa8.88□□□□□ -0.99
CLSTN3-201ENST00000266546 ZNF80P51504 273 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-201ENST00000266546 FAM223AQ8IWN6 122 aa8.88□□□□□ -0.99
CLSTN3-201ENST00000266546 C15orf53Q8NAA6 179 aa8.88□□□□□ -0.99
CLSTN3-201ENST00000266546 LINC01587Q99440 93 aa8.88□□□□□ -0.99
CLSTN3-201ENST00000266546 SETXQ7Z333 2677 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-201ENST00000266546 LY6LH3BQJ8 138 aa8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 VCANP13611 3396 aa8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 CENPVL3A0A0U1RRI6 287 aa8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 USMG5Q96IX5 58 aa8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 LENEPQ9Y5L5 61 aa8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 BUB3O43684 328 aa8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 IGLV2-11P01706 119 aa8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 LGALS1P09382 135 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 ATP6V0E2Q8NHE4 81 aa8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 PEMTQ9UBM1 199 aa8.87□□□□□ -0.99
CLSTN3-201ENST00000266546 VPS13AQ96RL7 3174 aa8.86□□□□□ -0.99
CLSTN3-201ENST00000266546 IGLC6P0CF74 106 aa8.86□□□□□ -0.99
CLSTN3-201ENST00000266546 MRPL53Q96EL3 112 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-201ENST00000266546 DAZ1Q9NQZ3 744 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-201ENST00000266546 GNRH2O43555 120 aa8.86□□□□□ -0.99
CLSTN3-201ENST00000266546 TCTEX1D4Q5JR98 221 aa8.86□□□□□ -0.99
CLSTN3-201ENST00000266546 ANKRD29Q8N6D5 301 aa8.86□□□□□ -0.99
CLSTN3-201ENST00000266546 A4D1N5 150 aa8.86□□□□□ -0.99
CLSTN3-201ENST00000266546 C9orf153Q5TBE3 101 aa8.86□□□□□ -0.99
CLSTN3-201ENST00000266546 NDUFA12Q9UI09 145 aa8.86□□□□□ -0.99
CLSTN3-201ENST00000266546 EBI3Q14213 229 aa8.85□□□□□ -0.99
CLSTN3-201ENST00000266546 BAALCQ8WXS3 180 aa8.85□□□□□ -0.99
CLSTN3-201ENST00000266546 U3KQK5 164 aa8.85□□□□□ -0.99
CLSTN3-201ENST00000266546 ADARB2-AS1A8MUL3 147 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 I3L3M4 83 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 ZNF625Q96I27 306 aaPredicted RBP8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 CARD19Q96LW7 228 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 A0A1W2PPR1 153 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 MAPKAPK5-AS1Q8N8E1 139 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 TOMM6Q96B49 74 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 F6UB75 175 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 H3BUA1 57 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 CRYGBP07316 175 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 Q6ZUT4 128 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 FANCD2OSQ96PS1 177 aa8.84□□□□□ -0.99
CLSTN3-201ENST00000266546 IGHV7-81A0A0B4J1V7 117 aa8.83□□□□□ -1
CLSTN3-201ENST00000266546 MT-ATP8P03928 68 aa8.83□□□□□ -1
CLSTN3-201ENST00000266546 SRSF2Q01130 221 aaKnown RBP8.83□□□□□ -1
CLSTN3-201ENST00000266546 PRIMA1Q86XR5 153 aa8.83□□□□□ -1
CLSTN3-201ENST00000266546 SMIM20Q8N5G0 67 aa8.83□□□□□ -1
CLSTN3-201ENST00000266546 Q8N9W7 124 aa8.83□□□□□ -1
CLSTN3-201ENST00000266546 EDA2RQ9HAV5 297 aa8.83□□□□□ -1
CLSTN3-201ENST00000266546 C11orf86A6NJI1 115 aa8.83□□□□□ -1
CLSTN3-201ENST00000266546 NDUFA4O00483 81 aa8.83□□□□□ -1
CLSTN3-201ENST00000266546 RASL10AQ92737 203 aa8.83□□□□□ -1
CLSTN3-201ENST00000266546 USP24Q9UPU5 2620 aa8.82□□□□□ -1
CLSTN3-201ENST00000266546 RBMY1BA6NDE4 496 aaKnown RBP8.82□□□□□ -1
CLSTN3-201ENST00000266546 RBMY1EA6NEQ0 496 aaKnown RBP8.82□□□□□ -1
CLSTN3-201ENST00000266546 RBMY1DP0C7P1 496 aaKnown RBP8.82□□□□□ -1
CLSTN3-201ENST00000266546 RBMY1A1P0DJD3 496 aaKnown RBP8.82□□□□□ -1
CLSTN3-201ENST00000266546 RBMY1CP0DJD4 496 aa8.82□□□□□ -1
CLSTN3-201ENST00000266546 GAGE2AQ6NT46 116 aa8.82□□□□□ -1
CLSTN3-201ENST00000266546 SPINK13Q1W4C9 94 aa8.82□□□□□ -1
CLSTN3-201ENST00000266546 ZFP2Q6ZN57 461 aa8.82□□□□□ -1
CLSTN3-201ENST00000266546 PIP4P2Q8N4L2 257 aa8.82□□□□□ -1
CLSTN3-201ENST00000266546 CRPP02741 224 aa8.82□□□□□ -1
CLSTN3-201ENST00000266546 LINC01620Q4KN68 170 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms