RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 SS18Q15532 418 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 C6orf226Q5I0X4 101 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 PIP4P2Q8N4L2 257 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 SLC25A29Q8N8R3 303 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 C17orf58Q2M2W7 97 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 IGF2-ASQ6U949 168 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 FANCD2OSQ96PS1 177 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 PRR25Q96S07 402 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 RHPN1-AS1Q9BWJ2 59 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 LENEPQ9Y5L5 61 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 K7EM74 188 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 IGF2BP2-AS1Q96M15 143 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 A0A0G2JNJ9 132 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 SIRPDQ9H106 197 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 Q9UFV3 132 aa4.5□□□□□ -1.69
VCAN-201ENST00000265077 IGKV1-39P01597 117 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 IGKV1D-39P04432 117 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 MLST8Q9BVC4 326 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 TTTY13Q9BZ97 58 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 H3BUX3 64 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 ATP5EP2Q5VTU8 51 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 RNF114Q9Y508 228 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 MRPS36P82909 103 aaKnown RBP4.49□□□□□ -1.69
VCAN-201ENST00000265077 SERP1Q9Y6X1 66 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 MPLKIPQ8TAP9 179 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 PRR20EP86478 221 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 PRR20CP86479 221 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 PRR20DP86480 221 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 PRR20BP86481 221 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 PRR20AP86496 221 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 E7EQL1 145 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 H3BUA1 57 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 LINC00310P59036 64 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 HAMPP81172 84 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 MLANAQ16655 118 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 A0A1B0GXF2 115 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 NDPQ00604 133 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 SPTSSBQ8NFR3 76 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 A0A0C4DFX4 3053 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 IGHV3-73A0A0B4J1V6 119 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 TIMM17BO60830 172 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 Q6ZR03 302 aa4.49□□□□□ -1.69
VCAN-201ENST00000265077 UBE2E1P51965 193 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 IGHV1OR15-1A0A075B7D0 117 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 TRAV12-1A0A0B4J245 112 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 INS-IGF2F8WCM5 200 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 LYNX1G3V0Z9 82 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 LYNX1P0DP58 116 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 ZFP2Q6ZN57 461 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 C20orf197Q8N268 126 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 SDHAF1A6NFY7 115 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 IGLV1-44P01699 117 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 CDIP1Q9H305 208 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 LYRM9A8MSI8 78 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 NDUFC1O43677 76 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 NDUFA12Q9UI09 145 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 LINC00205P59089 165 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 ZNF503Q96F45 646 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 KAAG1Q9UBP8 84 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 CFAP46Q8IYW2 2715 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 ASPHD1Q5U4P2 390 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 H3BQ85 93 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 C11orf1Q9H5F2 150 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 EP400Q96L91 3159 aa4.48□□□□□ -1.69
VCAN-201ENST00000265077 CD59P13987 128 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 ZNF134P52741 427 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 FAM120AOSQ5T036 256 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 ELANEP08246 267 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 P0DMU3 169 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 FAM231AP0DMU4 169 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 FAM231CP0DMU5 169 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 RPL18AQ02543 176 aaKnown RBP4.47□□□□□ -1.69
VCAN-201ENST00000265077 WT1-ASQ06250 92 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 WDR86Q86TI4 376 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 ATP6V0E1O15342 81 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 TRAV12-2A0A075B6T6 113 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 RSPO1Q2MKA7 263 aaPredicted RBP4.47□□□□□ -1.69
VCAN-201ENST00000265077 SPRY4Q9C004 299 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 SDIM1Q6ZPB5 146 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 SAA4P35542 130 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 DIAPH2-AS1Q14236 149 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 AGPAT4-IT1Q9H0P7 198 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 TMEM105Q8N8V8 129 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 A0A1W2PRX2 142 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 IGHV1-69DA0A0B4J2H0 117 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 VPREB1P12018 145 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 HOXD3P31249 432 aaPredicted RBP4.47□□□□□ -1.69
VCAN-201ENST00000265077 Q6ZQT7 251 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 ZNRF2Q8NHG8 242 aa4.47□□□□□ -1.69
VCAN-201ENST00000265077 NBEAL1Q6ZS30 2694 aa4.46□□□□□ -1.69
VCAN-201ENST00000265077 MUSTN1Q8IVN3 82 aa4.46□□□□□ -1.69
VCAN-201ENST00000265077 COL4A6Q14031 1691 aa4.46□□□□□ -1.69
VCAN-201ENST00000265077 MGAM2Q2M2H8 2515 aa4.46□□□□□ -1.69
VCAN-201ENST00000265077 PRB4P10163 310 aaPredicted RBP4.46□□□□□ -1.7
VCAN-201ENST00000265077 LY6DQ14210 128 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 KRTAP27-1Q3LI81 207 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 IGFL4Q6B9Z1 124 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 LYPD2Q6UXB3 125 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 IGLV3-9A0A075B6K5 115 aa4.46□□□□□ -1.7
VCAN-201ENST00000265077 BUB3O43684 328 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms