RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PGPEP1Q9NXJ5 209 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 HIGD1BQ9P298 99 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 IGHV4-30-2A0A087WSY4 118 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 AVPP01185 164 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 PSMG4Q5JS54 123 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 TMEM170BQ5T4T1 132 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 CLEC2AQ6UVW9 174 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 FAM159AQ6UWV7 190 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 TM2D2Q9BX73 214 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 MRPL16Q9NX20 251 aaKnown RBP6.86□□□□□ -1.31
MSH4-201ENST00000263187 TSSC4Q9Y5U2 329 aaPredicted RBP6.86□□□□□ -1.31
MSH4-201ENST00000263187 DOPEY1Q5JWR5 2465 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 ZNF462Q96JM2 2506 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 RNF223E7ERA6 249 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 ORMDL2Q53FV1 153 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 NEXN-AS1Q8NBZ9 246 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 ZNF418Q8TF45 676 aaPredicted RBP6.86□□□□□ -1.31
MSH4-201ENST00000263187 TOMM6Q96B49 74 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 MRAP2Q96G30 205 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 MDFICQ9P1T7 246 aa6.86□□□□□ -1.31
MSH4-201ENST00000263187 LINC01549A6NIU2 74 aa6.85□□□□□ -1.31
MSH4-201ENST00000263187 C11orf86A6NJI1 115 aa6.85□□□□□ -1.31
MSH4-201ENST00000263187 H7C2G1 150 aa6.85□□□□□ -1.31
MSH4-201ENST00000263187 ATP5J2P56134 94 aa6.85□□□□□ -1.31
MSH4-201ENST00000263187 FOXI2Q6ZQN5 318 aa6.85□□□□□ -1.31
MSH4-201ENST00000263187 FAM223BA6NKX1 122 aa6.85□□□□□ -1.31
MSH4-201ENST00000263187 E9PLD3 99 aa6.85□□□□□ -1.31
MSH4-201ENST00000263187 SOCS3O14543 225 aa6.85□□□□□ -1.31
MSH4-201ENST00000263187 ZFP2Q6ZN57 461 aa6.85□□□□□ -1.31
MSH4-201ENST00000263187 FAM223AQ8IWN6 122 aa6.85□□□□□ -1.31
MSH4-201ENST00000263187 TMEM238C9JI98 176 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 NDUFA4O00483 81 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 OVOL1O14753 267 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 SUMO4Q6EEV6 95 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 PTH2Q96A98 100 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 A0A1B0GWB2 263 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 TSHBP01222 138 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 PSMB2P49721 201 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 ZNF56Q15929 161 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 SPINK13Q1W4C9 94 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 CCL19Q99731 98 aa6.84□□□□□ -1.31
MSH4-201ENST00000263187 TRBV7-3A0A075B6L6 115 aa6.84□□□□□ -1.32
MSH4-201ENST00000263187 IGHV4-4A0A075B6R2 117 aa6.84□□□□□ -1.32
MSH4-201ENST00000263187 HOXA3O43365 443 aaPredicted RBP6.84□□□□□ -1.32
MSH4-201ENST00000263187 MRPL53Q96EL3 112 aaKnown RBP6.84□□□□□ -1.32
MSH4-201ENST00000263187 CRYGDP07320 174 aa6.83□□□□□ -1.32
MSH4-201ENST00000263187 AZU1P20160 251 aa6.83□□□□□ -1.32
MSH4-201ENST00000263187 GAGE13Q4V321 117 aa6.83□□□□□ -1.32
MSH4-201ENST00000263187 RNASE13Q5GAN3 156 aaKnown RBP6.83□□□□□ -1.32
MSH4-201ENST00000263187 AKAP9Q99996 3911 aa6.83□□□□□ -1.32
MSH4-201ENST00000263187 SDHAF1A6NFY7 115 aa6.83□□□□□ -1.32
MSH4-201ENST00000263187 IGHV4-59P01825 116 aa6.83□□□□□ -1.32
MSH4-201ENST00000263187 RRN3P1Q2M238 152 aa6.83□□□□□ -1.32
MSH4-201ENST00000263187 ZNF843Q8N446 348 aa6.83□□□□□ -1.32
MSH4-201ENST00000263187 DAZ1Q9NQZ3 744 aaKnown RBP6.83□□□□□ -1.32
MSH4-201ENST00000263187 ADARB2-AS1A8MUL3 147 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 TSPEAR-AS2P59090 65 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 SPAG8Q99932 426 aaPredicted RBP6.82□□□□□ -1.32
MSH4-201ENST00000263187 PIMREGQ9BSJ6 248 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 UBR5O95071 2799 aaPredicted RBP6.82□□□□□ -1.32
MSH4-201ENST00000263187 C19orf54Q5BKX5 351 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 CFAP161Q6P656 301 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 MORN3Q6PF18 240 aaPredicted RBP6.82□□□□□ -1.32
MSH4-201ENST00000263187 SPANXB1Q9NS25 103 aaPredicted RBP6.82□□□□□ -1.32
MSH4-201ENST00000263187 ZNF580Q9UK33 172 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 KNCNA6PVL3 124 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 P0DMU3 169 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 FAM231AP0DMU4 169 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 FAM231CP0DMU5 169 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 SYNJ2BPP57105 145 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
MSH4-201ENST00000263187 TRAV12-1A0A0B4J245 112 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 IGHG2P01859 326 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 SAMD13Q5VXD3 122 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 RAX2Q96IS3 184 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 PRRC2AP48634 2157 aaKnown RBP6.81□□□□□ -1.32
MSH4-201ENST00000263187 PROK1P58294 105 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 LINC00315P59091 139 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 CEMP1Q6PRD7 247 aaPredicted RBP6.81□□□□□ -1.32
MSH4-201ENST00000263187 Q8N1Y9 231 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 ZNRF2Q8NHG8 242 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 DUX3Q96PT4 197 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 KIR2DL4Q99706 377 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 DEFB136Q30KP8 78 aa6.81□□□□□ -1.32
MSH4-201ENST00000263187 ZNF469Q96JG9 3925 aaPredicted RBP6.81□□□□□ -1.32
MSH4-201ENST00000263187 MTORP42345 2549 aa6.8□□□□□ -1.32
MSH4-201ENST00000263187 IGLV4-69A0A075B6H9 119 aa6.8□□□□□ -1.32
MSH4-201ENST00000263187 Q9UF83 564 aa6.8□□□□□ -1.32
MSH4-201ENST00000263187 GAGE12HA6NDE8 117 aa6.8□□□□□ -1.32
MSH4-201ENST00000263187 A6NDX4 124 aa6.8□□□□□ -1.32
MSH4-201ENST00000263187 PRB1P04280 392 aa6.8□□□□□ -1.32
MSH4-201ENST00000263187 SCGB1C2P0DMR2 95 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 NPC2P61916 151 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 USMG5Q96IX5 58 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 LENEPQ9Y5L5 61 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 KIF25-AS1Q9Y6Z4 181 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 NBPF19A0A087WUL8 3843 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 TMEM238LA0A1B0GVL6 79 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 TSPAN13O95857 204 aa6.79□□□□□ -1.32
MSH4-201ENST00000263187 MSMBP08118 114 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms